RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 PRB2P02812 416 aaPredicted RBP5.26□□□□□ -1.57
SMAD3-212ENST00000559937 C7orf33Q8WU49 177 aa5.26□□□□□ -1.57
SMAD3-212ENST00000559937 IGKV3D-7A0A0C4DH55 119 aa5.25□□□□□ -1.57
SMAD3-212ENST00000559937 CCDC179H3BU77 68 aa5.25□□□□□ -1.57
SMAD3-212ENST00000559937 DHRS4-AS1Q9P1J3 65 aa5.25□□□□□ -1.57
SMAD3-212ENST00000559937 DNAH9Q9NYC9 4486 aa5.24□□□□□ -1.57
SMAD3-212ENST00000559937 UQCRQO14949 82 aa5.24□□□□□ -1.57
SMAD3-212ENST00000559937 SPRR1AP35321 89 aa5.24□□□□□ -1.57
SMAD3-212ENST00000559937 SERTAD4-AS1Q5TG53 156 aa5.24□□□□□ -1.57
SMAD3-212ENST00000559937 IGLV1-50A0A075B6I6 118 aa5.23□□□□□ -1.57
SMAD3-212ENST00000559937 B5MCH6 92 aa5.23□□□□□ -1.57
SMAD3-212ENST00000559937 BCE1O60756 84 aa5.23□□□□□ -1.57
SMAD3-212ENST00000559937 COX7CP15954 63 aa5.23□□□□□ -1.57
SMAD3-212ENST00000559937 C14orf177Q52M58 125 aa5.23□□□□□ -1.57
SMAD3-212ENST00000559937 CASC10Q5T4H9 136 aa5.23□□□□□ -1.57
SMAD3-212ENST00000559937 C3orf22Q8N5N4 141 aa5.23□□□□□ -1.57
SMAD3-212ENST00000559937 B9D2Q9BPU9 175 aa5.23□□□□□ -1.57
SMAD3-212ENST00000559937 STAB2Q8WWQ8 2551 aa5.22□□□□□ -1.57
SMAD3-212ENST00000559937 KRTAP4-16G5E9R7 235 aaPredicted RBP5.22□□□□□ -1.57
SMAD3-212ENST00000559937 CNBPP62633 177 aaKnown RBP5.22□□□□□ -1.57
SMAD3-212ENST00000559937 Q6ZRX8 168 aa5.22□□□□□ -1.57
SMAD3-212ENST00000559937 APLNQ9ULZ1 77 aa5.22□□□□□ -1.57
SMAD3-212ENST00000559937 PKIGQ9Y2B9 76 aa5.22□□□□□ -1.57
SMAD3-212ENST00000559937 COL7A1Q02388 2944 aa5.22□□□□□ -1.57
SMAD3-212ENST00000559937 ETDCA0A1B0GVM5 59 aa5.21□□□□□ -1.58
SMAD3-212ENST00000559937 A0A1B0GW54 56 aa5.21□□□□□ -1.58
SMAD3-212ENST00000559937 CXCL6P80162 114 aa5.21□□□□□ -1.58
SMAD3-212ENST00000559937 Q6ZVQ6 151 aa5.21□□□□□ -1.58
SMAD3-212ENST00000559937 MRPL55Q7Z7F7 128 aaKnown RBP5.2□□□□□ -1.58
SMAD3-212ENST00000559937 UBE2DNLQ8IWF7 75 aa5.2□□□□□ -1.58
SMAD3-212ENST00000559937 SERP2Q8N6R1 65 aa5.2□□□□□ -1.58
SMAD3-212ENST00000559937 IGLV5-48A0A075B6I7 105 aa5.19□□□□□ -1.58
SMAD3-212ENST00000559937 M0R2N4 97 aa5.19□□□□□ -1.58
SMAD3-212ENST00000559937 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
SMAD3-212ENST00000559937 C9orf153Q5TBE3 101 aa5.19□□□□□ -1.58
SMAD3-212ENST00000559937 A0A087WVE0 104 aa5.18□□□□□ -1.58
SMAD3-212ENST00000559937 FAM168BA1KXE4 195 aa5.18□□□□□ -1.58
SMAD3-212ENST00000559937 C16orf90A8MZG2 172 aa5.18□□□□□ -1.58
SMAD3-212ENST00000559937 CRYGAP11844 174 aa5.18□□□□□ -1.58
SMAD3-212ENST00000559937 KRTAP7-1Q8IUC3 87 aa5.18□□□□□ -1.58
SMAD3-212ENST00000559937 Q8N377 158 aa5.18□□□□□ -1.58
SMAD3-212ENST00000559937 KRTAP1-5Q9BYS1 174 aa5.18□□□□□ -1.58
SMAD3-212ENST00000559937 NUPR2A6NF83 97 aa5.17□□□□□ -1.58
SMAD3-212ENST00000559937 PSCAO43653 123 aa5.17□□□□□ -1.58
SMAD3-212ENST00000559937 REG3GQ6UW15 175 aa5.17□□□□□ -1.58
SMAD3-212ENST00000559937 FAM19A5Q7Z5A7 132 aaPredicted RBP5.17□□□□□ -1.58
SMAD3-212ENST00000559937 FAM19A1Q7Z5A9 133 aa5.17□□□□□ -1.58
SMAD3-212ENST00000559937 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
SMAD3-212ENST00000559937 Q9BRP9 147 aa5.17□□□□□ -1.58
SMAD3-212ENST00000559937 KMT2CQ8NEZ4 4911 aaKnown RBP5.16□□□□□ -1.58
SMAD3-212ENST00000559937 RPL37AP8A6NKH3 93 aa5.16□□□□□ -1.58
SMAD3-212ENST00000559937 HAMPP81172 84 aa5.16□□□□□ -1.58
SMAD3-212ENST00000559937 TNP2Q05952 138 aa5.16□□□□□ -1.58
SMAD3-212ENST00000559937 A0A096LNI7 61 aa5.15□□□□□ -1.59
SMAD3-212ENST00000559937 SS18L2Q9UHA2 77 aa5.15□□□□□ -1.59
SMAD3-212ENST00000559937 FUSP35637 526 aaKnown RBP eCLIP5.14□□□□□ -1.594e-6■■□□□ 13.9
SMAD3-212ENST00000559937 UBE2BP63146 152 aa5.14□□□□□ -1.59
SMAD3-212ENST00000559937 HUWE1Q7Z6Z7 4374 aaKnown RBP5.13□□□□□ -1.59
SMAD3-212ENST00000559937 TRAV7A0A075B6U4 112 aa5.13□□□□□ -1.59
SMAD3-212ENST00000559937 NBDYA0A0U1RRE5 68 aa5.13□□□□□ -1.59
SMAD3-212ENST00000559937 NREPQ16612 68 aa5.13□□□□□ -1.59
SMAD3-212ENST00000559937 DEFB105AQ8NG35 78 aa5.13□□□□□ -1.59
SMAD3-212ENST00000559937 H0Y9J4 135 aa5.12□□□□□ -1.59
SMAD3-212ENST00000559937 C1orf137Q5JT78 98 aa5.12□□□□□ -1.59
SMAD3-212ENST00000559937 C9orf163Q8N9P6 203 aa5.12□□□□□ -1.59
SMAD3-212ENST00000559937 Q8NBF4 154 aa5.12□□□□□ -1.59
SMAD3-212ENST00000559937 SPRR4Q96PI1 79 aa5.12□□□□□ -1.59
SMAD3-212ENST00000559937 LINC00474Q9P2X8 69 aa5.12□□□□□ -1.59
SMAD3-212ENST00000559937 IGLV8-61A0A075B6I0 122 aa5.11□□□□□ -1.59
SMAD3-212ENST00000559937 LRCOL1A6NCL2 159 aa5.11□□□□□ -1.59
SMAD3-212ENST00000559937 ERC2-IT1O76042 136 aa5.11□□□□□ -1.59
SMAD3-212ENST00000559937 Q6ZRN7 208 aaPredicted RBP5.11□□□□□ -1.59
SMAD3-212ENST00000559937 IGKV2-24A0A0C4DH68 120 aa5.1□□□□□ -1.59
SMAD3-212ENST00000559937 A0A1W2PNM2 257 aa5.1□□□□□ -1.59
SMAD3-212ENST00000559937 A0A1W2PNN7 141 aa5.1□□□□□ -1.59
SMAD3-212ENST00000559937 F8WEM9 126 aa5.1□□□□□ -1.59
SMAD3-212ENST00000559937 TMEM258P61165 79 aa5.1□□□□□ -1.59
SMAD3-212ENST00000559937 ST20-AS1Q8NBB2 130 aa5.1□□□□□ -1.59
SMAD3-212ENST00000559937 BPY2O14599 106 aa5.09□□□□□ -1.59
SMAD3-212ENST00000559937 IGKV4-1P06312 121 aa5.09□□□□□ -1.59
SMAD3-212ENST00000559937 SPRR1BP22528 89 aa5.09□□□□□ -1.59
SMAD3-212ENST00000559937 SMIM29Q86T20 159 aa5.09□□□□□ -1.59
SMAD3-212ENST00000559937 RYR3Q15413 4870 aa5.08□□□□□ -1.6
SMAD3-212ENST00000559937 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.08□□□□□ -1.6
SMAD3-212ENST00000559937 EPM2AB3EWF7 344 aa5.08□□□□□ -1.6
SMAD3-212ENST00000559937 SCXQ7RTU7 201 aa5.08□□□□□ -1.6
SMAD3-212ENST00000559937 C3orf84H3BNL1 204 aa5.07□□□□□ -1.6
SMAD3-212ENST00000559937 LINC00476Q8WZB0 136 aa5.07□□□□□ -1.6
SMAD3-212ENST00000559937 WWC2-AS2Q96NR7 200 aa5.07□□□□□ -1.6
SMAD3-212ENST00000559937 SACSQ9NZJ4 4579 aa5.07□□□□□ -1.6
SMAD3-212ENST00000559937 PHF5AQ7RTV0 110 aaKnown RBP5.06□□□□□ -1.6
SMAD3-212ENST00000559937 TENM2Q9NT68 2774 aa5.06□□□□□ -1.6
SMAD3-212ENST00000559937 CHTF8P0CG12 524 aa5.05□□□□□ -1.6
SMAD3-212ENST00000559937 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
SMAD3-212ENST00000559937 PRLHP81277 87 aa5.05□□□□□ -1.6
SMAD3-212ENST00000559937 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
SMAD3-212ENST00000559937 DYNC2H1Q8NCM8 4307 aaKnown RBP5.05□□□□□ -1.6
SMAD3-212ENST00000559937 IGFL1Q6UW32 110 aa5.04□□□□□ -1.6
SMAD3-212ENST00000559937 HIGD2AQ9BW72 106 aa5.04□□□□□ -1.6
SMAD3-212ENST00000559937 DNAH7Q8WXX0 4024 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms