RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SFTA2Q6UW10 78 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 HIGD1BQ9P298 99 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 HSPG2P98160 4391 aa3.27□□□□□ -1.89
SPG11-220ENST00000559933 RPL37AP8A6NKH3 93 aa3.27□□□□□ -1.89
SPG11-220ENST00000559933 M0QXV9 152 aa3.27□□□□□ -1.89
SPG11-220ENST00000559933 BVES-AS1Q5T3Y7 98 aa3.27□□□□□ -1.89
SPG11-220ENST00000559933 Q6ZSA8 131 aa3.27□□□□□ -1.89
SPG11-220ENST00000559933 SCXQ7RTU7 201 aa3.27□□□□□ -1.89
SPG11-220ENST00000559933 CEND1Q8N111 149 aa3.27□□□□□ -1.89
SPG11-220ENST00000559933 LINC00337Q8N6G1 96 aa3.27□□□□□ -1.89
SPG11-220ENST00000559933 C7orf33Q8WU49 177 aa3.27□□□□□ -1.89
SPG11-220ENST00000559933 H7C2G1 150 aa3.26□□□□□ -1.89
SPG11-220ENST00000559933 CFC1BP0CG36 223 aa3.26□□□□□ -1.89
SPG11-220ENST00000559933 CFC1P0CG37 223 aa3.26□□□□□ -1.89
SPG11-220ENST00000559933 Q6ZVH6 145 aa3.26□□□□□ -1.89
SPG11-220ENST00000559933 CIRBP-AS1Q8TBR5 109 aa3.26□□□□□ -1.89
SPG11-220ENST00000559933 DPH3Q96FX2 82 aa3.26□□□□□ -1.89
SPG11-220ENST00000559933 NAA38Q9BRA0 125 aaKnown RBP3.26□□□□□ -1.89
SPG11-220ENST00000559933 NHP2Q9NX24 153 aaKnown RBP3.26□□□□□ -1.89
SPG11-220ENST00000559933 C22orf24Q9Y442 160 aa3.26□□□□□ -1.89
SPG11-220ENST00000559933 LOC107984156A0A0G2JMH3 177 aa3.25□□□□□ -1.89
SPG11-220ENST00000559933 TRBV10-3A0A0K0K1G6 114 aa3.25□□□□□ -1.89
SPG11-220ENST00000559933 SMR3BP02814 79 aaPredicted RBP3.25□□□□□ -1.89
SPG11-220ENST00000559933 IFITM1P13164 125 aa3.25□□□□□ -1.89
SPG11-220ENST00000559933 RPL13AP40429 203 aaKnown RBP3.25□□□□□ -1.89
SPG11-220ENST00000559933 XGP55808 180 aa3.25□□□□□ -1.89
SPG11-220ENST00000559933 ARL17AQ8IVW1 177 aa3.25□□□□□ -1.89
SPG11-220ENST00000559933 NKAPP1Q8N9T2 125 aa3.25□□□□□ -1.89
SPG11-220ENST00000559933 LINC00167Q96N53 147 aa3.25□□□□□ -1.89
SPG11-220ENST00000559933 SNHG12Q9BXW3 62 aa3.25□□□□□ -1.89
SPG11-220ENST00000559933 IGLV5-37A0A075B6J1 123 aa3.24□□□□□ -1.89
SPG11-220ENST00000559933 RPL24P83731 157 aaKnown RBP3.24□□□□□ -1.89
SPG11-220ENST00000559933 TAL2Q16559 108 aa3.24□□□□□ -1.89
SPG11-220ENST00000559933 MRPL55Q7Z7F7 128 aaKnown RBP3.24□□□□□ -1.89
SPG11-220ENST00000559933 OR13C6PQ8NH95 151 aa3.24□□□□□ -1.89
SPG11-220ENST00000559933 RAB37Q96AX2 223 aa3.24□□□□□ -1.89
SPG11-220ENST00000559933 PLAC8Q9NZF1 115 aa3.24□□□□□ -1.89
SPG11-220ENST00000559933 A6NDN8 102 aa3.23□□□□□ -1.89
SPG11-220ENST00000559933 M0R143 59 aa3.23□□□□□ -1.89
SPG11-220ENST00000559933 M0R378 163 aa3.23□□□□□ -1.89
SPG11-220ENST00000559933 NDUFC2O95298 119 aa3.23□□□□□ -1.89
SPG11-220ENST00000559933 IGLV6-57P01721 117 aa3.23□□□□□ -1.89
SPG11-220ENST00000559933 UBE2BP63146 152 aa3.23□□□□□ -1.89
SPG11-220ENST00000559933 ABCA13Q86UQ4 5058 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 TRAV23DV6A0A075B6W5 121 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 A0A0B4J2C4 111 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 A0A1B0GWB2 263 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 EPM2AB3EWF7 344 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 TSPAN13O95857 204 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 S100A7L2Q5SY68 101 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 SMIM11BQ8TCY0 68 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 LINC00474Q9P2X8 69 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 PKIGQ9Y2B9 76 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 VPS13BQ7Z7G8 4022 aa3.22□□□□□ -1.89
SPG11-220ENST00000559933 TRBV10-2A0A0K0K1G8 114 aa3.21□□□□□ -1.9
SPG11-220ENST00000559933 TAX1BP3O14907 124 aa3.21□□□□□ -1.9
SPG11-220ENST00000559933 PRLHP81277 87 aa3.21□□□□□ -1.9
SPG11-220ENST00000559933 Q1RN00 199 aa3.21□□□□□ -1.9
SPG11-220ENST00000559933 COPS9Q8WXC6 57 aa3.21□□□□□ -1.9
SPG11-220ENST00000559933 PPDPFQ9H3Y8 114 aa3.21□□□□□ -1.9
SPG11-220ENST00000559933 PSORS1C2Q9UIG4 136 aa3.21□□□□□ -1.9
SPG11-220ENST00000559933 TRAV13-2A0A0B4J235 113 aa3.2□□□□□ -1.9
SPG11-220ENST00000559933 ZNF73O43830 326 aaPredicted RBP3.2□□□□□ -1.9
SPG11-220ENST00000559933 C6orf99Q4VX62 202 aa3.2□□□□□ -1.9
SPG11-220ENST00000559933 REG3GQ6UW15 175 aa3.2□□□□□ -1.9
SPG11-220ENST00000559933 TMEM126AQ9H061 195 aa3.2□□□□□ -1.9
SPG11-220ENST00000559933 PRO1854Q9UHT4 67 aa3.2□□□□□ -1.9
SPG11-220ENST00000559933 H3BUT2 72 aa3.19□□□□□ -1.9
SPG11-220ENST00000559933 PRYO14603 147 aa3.19□□□□□ -1.9
SPG11-220ENST00000559933 LBHQ53QV2 105 aaPredicted RBP3.19□□□□□ -1.9
SPG11-220ENST00000559933 C1orf137Q5JT78 98 aa3.19□□□□□ -1.9
SPG11-220ENST00000559933 FAM19A1Q7Z5A9 133 aa3.19□□□□□ -1.9
SPG11-220ENST00000559933 CLEC2BQ92478 149 aa3.19□□□□□ -1.9
SPG11-220ENST00000559933 DIRC1Q969H9 104 aa3.19□□□□□ -1.9
SPG11-220ENST00000559933 FAM218AQ96MZ4 157 aa3.19□□□□□ -1.9
SPG11-220ENST00000559933 KCNQ1DNQ9H478 68 aa3.19□□□□□ -1.9
SPG11-220ENST00000559933 KRTAP4-16G5E9R7 235 aaPredicted RBP3.18□□□□□ -1.9
SPG11-220ENST00000559933 CDK2AP2O75956 126 aa3.18□□□□□ -1.9
SPG11-220ENST00000559933 ERC2-IT1O76042 136 aa3.18□□□□□ -1.9
SPG11-220ENST00000559933 SPRR1AP35321 89 aa3.18□□□□□ -1.9
SPG11-220ENST00000559933 PSMB2P49721 201 aa3.18□□□□□ -1.9
SPG11-220ENST00000559933 KRTAP10-4P60372 401 aaPredicted RBP3.18□□□□□ -1.9
SPG11-220ENST00000559933 RPL37AP61513 92 aaKnown RBP3.18□□□□□ -1.9
SPG11-220ENST00000559933 Q9BRP9 147 aa3.18□□□□□ -1.9
SPG11-220ENST00000559933 SRRM2Q9UQ35 2752 aaKnown RBP3.18□□□□□ -1.9
SPG11-220ENST00000559933 PKHD1L1Q86WI1 4243 aa3.18□□□□□ -1.9
SPG11-220ENST00000559933 ETDCA0A1B0GVM5 59 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 BCE1O60756 84 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 COX7BP24311 80 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 RPL28P46779 137 aaKnown RBP3.17□□□□□ -1.9
SPG11-220ENST00000559933 UBE2AP49459 152 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 ELOF1P60002 83 aaKnown RBP3.17□□□□□ -1.9
SPG11-220ENST00000559933 COL5A1-AS1Q5SY13 56 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 Q5VSD8 79 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 KRTAP13-1Q8IUC0 172 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 ST20-AS1Q8NBB2 130 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 SMCR5Q8TEV8 140 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 HIGD2AQ9BW72 106 aa3.17□□□□□ -1.9
SPG11-220ENST00000559933 MUC2Q02817 5179 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms