RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 REG3GQ6UW15 175 aa8.87□□□□□ -0.99
SMAD6-204ENST00000559931 GTF2H5Q6ZYL4 71 aa8.87□□□□□ -0.99
SMAD6-204ENST00000559931 LINC00337Q8N6G1 96 aa8.87□□□□□ -0.99
SMAD6-204ENST00000559931 TMEM126AQ9H061 195 aa8.87□□□□□ -0.99
SMAD6-204ENST00000559931 IGLV6-57P01721 117 aa8.86□□□□□ -0.99
SMAD6-204ENST00000559931 CBY1Q9Y3M2 126 aa8.86□□□□□ -0.99
SMAD6-204ENST00000559931 ABCA13Q86UQ4 5058 aa8.86□□□□□ -0.99
SMAD6-204ENST00000559931 PRYO14603 147 aa8.85□□□□□ -0.99
SMAD6-204ENST00000559931 FXYD2P54710 66 aa8.85□□□□□ -0.99
SMAD6-204ENST00000559931 RAB37Q96AX2 223 aa8.85□□□□□ -0.99
SMAD6-204ENST00000559931 KCNQ1DNQ9H478 68 aa8.85□□□□□ -0.99
SMAD6-204ENST00000559931 TRAV23DV6A0A075B6W5 121 aa8.84□□□□□ -0.99
SMAD6-204ENST00000559931 BCE1O60756 84 aa8.84□□□□□ -0.99
SMAD6-204ENST00000559931 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
SMAD6-204ENST00000559931 H3BUT2 72 aa8.83□□□□□ -1
SMAD6-204ENST00000559931 IGLV7-43P04211 117 aa8.83□□□□□ -1
SMAD6-204ENST00000559931 FABP2P12104 132 aa8.83□□□□□ -1
SMAD6-204ENST00000559931 UBE2AP49459 152 aa8.83□□□□□ -1
SMAD6-204ENST00000559931 FAM19A1Q7Z5A9 133 aa8.83□□□□□ -1
SMAD6-204ENST00000559931 ETDCA0A1B0GVM5 59 aa8.82□□□□□ -1
SMAD6-204ENST00000559931 CFC1BP0CG36 223 aa8.82□□□□□ -1
SMAD6-204ENST00000559931 CFC1P0CG37 223 aa8.82□□□□□ -1
SMAD6-204ENST00000559931 PCLOQ9Y6V0 5065 aa8.82□□□□□ -1
SMAD6-204ENST00000559931 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
SMAD6-204ENST00000559931 A0A1W2PPM0 123 aa8.81□□□□□ -1
SMAD6-204ENST00000559931 H7C2G1 150 aa8.81□□□□□ -1
SMAD6-204ENST00000559931 RPL13AP40429 203 aaKnown RBP8.81□□□□□ -1
SMAD6-204ENST00000559931 A0A1B0GWB2 263 aa8.8□□□□□ -1
SMAD6-204ENST00000559931 K7EP34 96 aa8.8□□□□□ -1
SMAD6-204ENST00000559931 ZNF73O43830 326 aaPredicted RBP8.8□□□□□ -1
SMAD6-204ENST00000559931 RPL28P46779 137 aaKnown RBP8.8□□□□□ -1
SMAD6-204ENST00000559931 KRTAP10-4P60372 401 aaPredicted RBP8.79□□□□□ -1
SMAD6-204ENST00000559931 PRLHP81277 87 aa8.79□□□□□ -1
SMAD6-204ENST00000559931 DIRC1Q969H9 104 aa8.79□□□□□ -1
SMAD6-204ENST00000559931 A0A0B4J2C4 111 aa8.78□□□□□ -1
SMAD6-204ENST00000559931 PRO1854Q9UHT4 67 aa8.78□□□□□ -1
SMAD6-204ENST00000559931 SPCS1Q9Y6A9 102 aa8.78□□□□□ -1
SMAD6-204ENST00000559931 K7ERJ3 54 aa8.77□□□□□ -1.01
SMAD6-204ENST00000559931 ZNF861PO60384 105 aa8.77□□□□□ -1.01
SMAD6-204ENST00000559931 SPRR1AP35321 89 aa8.77□□□□□ -1.01
SMAD6-204ENST00000559931 Q1RN00 199 aa8.77□□□□□ -1.01
SMAD6-204ENST00000559931 C6orf99Q4VX62 202 aa8.77□□□□□ -1.01
SMAD6-204ENST00000559931 LYRM7Q5U5X0 104 aa8.77□□□□□ -1.01
SMAD6-204ENST00000559931 SMIM11BQ8TCY0 68 aa8.77□□□□□ -1.01
SMAD6-204ENST00000559931 PKHD1L1Q86WI1 4243 aa8.77□□□□□ -1.01
SMAD6-204ENST00000559931 FLG2Q5D862 2391 aaPredicted RBP8.76□□□□□ -1.01
SMAD6-204ENST00000559931 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
SMAD6-204ENST00000559931 SPINK6Q6UWN8 80 aa8.76□□□□□ -1.01
SMAD6-204ENST00000559931 B5MCH6 92 aa8.75□□□□□ -1.01
SMAD6-204ENST00000559931 HIGD2AQ9BW72 106 aa8.75□□□□□ -1.01
SMAD6-204ENST00000559931 KRTAP4-16G5E9R7 235 aaPredicted RBP8.74□□□□□ -1.01
SMAD6-204ENST00000559931 COX7BP24311 80 aa8.74□□□□□ -1.01
SMAD6-204ENST00000559931 H0Y9J4 135 aa8.73□□□□□ -1.01
SMAD6-204ENST00000559931 Q6ZRX8 168 aa8.73□□□□□ -1.01
SMAD6-204ENST00000559931 NAA38Q9BRA0 125 aaKnown RBP8.73□□□□□ -1.01
SMAD6-204ENST00000559931 KRTAP13-1Q8IUC0 172 aa8.72□□□□□ -1.01
SMAD6-204ENST00000559931 TRBV7-6A0A0J9YX20 115 aa8.71□□□□□ -1.02
SMAD6-204ENST00000559931 SMCR5Q8TEV8 140 aa8.71□□□□□ -1.02
SMAD6-204ENST00000559931 PSMB2P49721 201 aa8.7□□□□□ -1.02
SMAD6-204ENST00000559931 ELOF1P60002 83 aaKnown RBP8.69□□□□□ -1.02
SMAD6-204ENST00000559931 Q9BRP9 147 aa8.68□□□□□ -1.02
SMAD6-204ENST00000559931 DHRS4-AS1Q9P1J3 65 aa8.68□□□□□ -1.02
SMAD6-204ENST00000559931 F8W1H4 67 aa8.67□□□□□ -1.02
SMAD6-204ENST00000559931 K7ERU9 68 aa8.67□□□□□ -1.02
SMAD6-204ENST00000559931 SLC25A20O43772 301 aa8.67□□□□□ -1.02
SMAD6-204ENST00000559931 TSPAN13O95857 204 aa8.67□□□□□ -1.02
SMAD6-204ENST00000559931 TRBV20-1A0A075B6N2 111 aa8.66□□□□□ -1.02
SMAD6-204ENST00000559931 H0YGX0 51 aa8.65□□□□□ -1.02
SMAD6-204ENST00000559931 ERC2-IT1O76042 136 aa8.65□□□□□ -1.02
SMAD6-204ENST00000559931 COX6CP09669 75 aa8.65□□□□□ -1.02
SMAD6-204ENST00000559931 OCIAD2Q56VL3 154 aa8.65□□□□□ -1.02
SMAD6-204ENST00000559931 TRIAP1O43715 76 aa8.64□□□□□ -1.03
SMAD6-204ENST00000559931 SNCGO76070 127 aa8.64□□□□□ -1.03
SMAD6-204ENST00000559931 SCGB1C2P0DMR2 95 aa8.64□□□□□ -1.03
SMAD6-204ENST00000559931 ZNF706Q9Y5V0 76 aaPredicted RBP8.64□□□□□ -1.03
SMAD6-204ENST00000559931 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
SMAD6-204ENST00000559931 LINC00575Q6W349 94 aa8.63□□□□□ -1.03
SMAD6-204ENST00000559931 hADV29S1A0JD25 119 aa8.62□□□□□ -1.03
SMAD6-204ENST00000559931 GAGE2AQ6NT46 116 aa8.62□□□□□ -1.03
SMAD6-204ENST00000559931 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
SMAD6-204ENST00000559931 DEFB105AQ8NG35 78 aa8.61□□□□□ -1.03
SMAD6-204ENST00000559931 SPRR4Q96PI1 79 aa8.61□□□□□ -1.03
SMAD6-204ENST00000559931 H3BMG7 143 aa8.6□□□□□ -1.03
SMAD6-204ENST00000559931 ANAPC11Q9NYG5 84 aa8.6□□□□□ -1.03
SMAD6-204ENST00000559931 FAT3Q8TDW7 4589 aa8.6□□□□□ -1.03
SMAD6-204ENST00000559931 J3QR89 54 aa8.59□□□□□ -1.03
SMAD6-204ENST00000559931 LRP1Q07954 4544 aaKnown RBP8.58□□□□□ -1.04
SMAD6-204ENST00000559931 CLEC2BQ92478 149 aa8.58□□□□□ -1.04
SMAD6-204ENST00000559931 KRTAP1-4P0C5Y4 121 aa8.57□□□□□ -1.04
SMAD6-204ENST00000559931 FAM218AQ96MZ4 157 aa8.57□□□□□ -1.04
SMAD6-204ENST00000559931 OXTP01178 125 aa8.56□□□□□ -1.04
SMAD6-204ENST00000559931 CRYGAP11844 174 aa8.56□□□□□ -1.04
SMAD6-204ENST00000559931 PRR26Q8N8Z3 221 aa8.56□□□□□ -1.04
SMAD6-204ENST00000559931 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
SMAD6-204ENST00000559931 ATXN8Q156A1 80 aa8.55□□□□□ -1.04
SMAD6-204ENST00000559931 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
SMAD6-204ENST00000559931 Q6ZQY7 126 aa8.55□□□□□ -1.04
SMAD6-204ENST00000559931 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
SMAD6-204ENST00000559931 PRO0461Q9UI25 63 aa8.55□□□□□ -1.04
SMAD6-204ENST00000559931 DMBT1Q9UGM3 2413 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms