RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 COX17Q14061 63 aa8.47□□□□□ -1.05
CHRNB4-204ENST00000559849 PFN2P35080 140 aa8.47□□□□□ -1.05
CHRNB4-204ENST00000559849 C5orf47Q569G3 176 aa8.47□□□□□ -1.05
CHRNB4-204ENST00000559849 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
CHRNB4-204ENST00000559849 PSORS1C2Q9UIG4 136 aa8.46□□□□□ -1.05
CHRNB4-204ENST00000559849 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.06
CHRNB4-204ENST00000559849 KRTAP29-1A8MX34 341 aaPredicted RBP8.45□□□□□ -1.06
CHRNB4-204ENST00000559849 SERTAD4-AS1Q5TG53 156 aa8.45□□□□□ -1.06
CHRNB4-204ENST00000559849 SCGB1D4Q6XE38 83 aa8.45□□□□□ -1.06
CHRNB4-204ENST00000559849 OXTP01178 125 aa8.44□□□□□ -1.06
CHRNB4-204ENST00000559849 PSMB2P49721 201 aa8.44□□□□□ -1.06
CHRNB4-204ENST00000559849 LINC01600Q96MT4 127 aa8.44□□□□□ -1.06
CHRNB4-204ENST00000559849 C22orf24Q9Y442 160 aa8.44□□□□□ -1.06
CHRNB4-204ENST00000559849 UBE2BP63146 152 aa8.44□□□□□ -1.06
CHRNB4-204ENST00000559849 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
CHRNB4-204ENST00000559849 J3QL48 77 aa8.43□□□□□ -1.06
CHRNB4-204ENST00000559849 C1orf137Q5JT78 98 aa8.43□□□□□ -1.06
CHRNB4-204ENST00000559849 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.06
CHRNB4-204ENST00000559849 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
CHRNB4-204ENST00000559849 SPINK6Q6UWN8 80 aa8.42□□□□□ -1.06
CHRNB4-204ENST00000559849 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
CHRNB4-204ENST00000559849 KRTAP11-1Q8IUC1 163 aa8.42□□□□□ -1.06
CHRNB4-204ENST00000559849 MRPL55Q7Z7F7 128 aaKnown RBP8.41□□□□□ -1.06
CHRNB4-204ENST00000559849 PPDPFQ9H3Y8 114 aa8.41□□□□□ -1.06
CHRNB4-204ENST00000559849 SND1-IT1Q9HBX3 110 aa8.41□□□□□ -1.06
CHRNB4-204ENST00000559849 NDUFA12Q9UI09 145 aa8.41□□□□□ -1.06
CHRNB4-204ENST00000559849 LOC107984156A0A0G2JMH3 177 aa8.41□□□□□ -1.06
CHRNB4-204ENST00000559849 SCGB1C2P0DMR2 95 aa8.41□□□□□ -1.06
CHRNB4-204ENST00000559849 LINC00158P58513 81 aa8.41□□□□□ -1.06
CHRNB4-204ENST00000559849 ARL17AQ8IVW1 177 aa8.41□□□□□ -1.06
CHRNB4-204ENST00000559849 ANKRD29Q8N6D5 301 aa8.41□□□□□ -1.06
CHRNB4-204ENST00000559849 FAT3Q8TDW7 4589 aa8.4□□□□□ -1.07
CHRNB4-204ENST00000559849 HERC1Q15751 4861 aa8.39□□□□□ -1.07
CHRNB4-204ENST00000559849 IGLV5-37A0A075B6J1 123 aa8.39□□□□□ -1.07
CHRNB4-204ENST00000559849 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
CHRNB4-204ENST00000559849 NKAPP1Q8N9T2 125 aa8.39□□□□□ -1.07
CHRNB4-204ENST00000559849 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
CHRNB4-204ENST00000559849 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
CHRNB4-204ENST00000559849 LINC00167Q96N53 147 aa8.38□□□□□ -1.07
CHRNB4-204ENST00000559849 TCL1BO95988 128 aa8.37□□□□□ -1.07
CHRNB4-204ENST00000559849 REG3GQ6UW15 175 aa8.36□□□□□ -1.07
CHRNB4-204ENST00000559849 SPANXDQ9BXN6 97 aa8.36□□□□□ -1.07
CHRNB4-204ENST00000559849 VPREB1P12018 145 aa8.35□□□□□ -1.07
CHRNB4-204ENST00000559849 SPANXCQ9NY87 97 aa8.35□□□□□ -1.07
CHRNB4-204ENST00000559849 RPL37AP8A6NKH3 93 aa8.34□□□□□ -1.07
CHRNB4-204ENST00000559849 SLC25A20O43772 301 aa8.34□□□□□ -1.07
CHRNB4-204ENST00000559849 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
CHRNB4-204ENST00000559849 DIRC1Q969H9 104 aa8.34□□□□□ -1.07
CHRNB4-204ENST00000559849 LITAFQ99732 161 aa8.34□□□□□ -1.07
CHRNB4-204ENST00000559849 PRO1854Q9UHT4 67 aa8.33□□□□□ -1.08
CHRNB4-204ENST00000559849 TIMM17BO60830 172 aa8.33□□□□□ -1.08
CHRNB4-204ENST00000559849 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
CHRNB4-204ENST00000559849 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
CHRNB4-204ENST00000559849 CFC1BP0CG36 223 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 CFC1P0CG37 223 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 C4orf48Q5BLP8 95 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 Q8NDZ9 215 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 IGLV1-50A0A075B6I6 118 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 IGKV2-28A0A075B6P5 120 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 A0A0B4J2C4 111 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 A0A1B0GX51 115 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 ZNF861PO60384 105 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 IGKV2D-28P01615 120 aa8.31□□□□□ -1.08
CHRNB4-204ENST00000559849 H0Y9J4 135 aa8.3□□□□□ -1.08
CHRNB4-204ENST00000559849 J3KT08 172 aa8.3□□□□□ -1.08
CHRNB4-204ENST00000559849 BCE1O60756 84 aa8.3□□□□□ -1.08
CHRNB4-204ENST00000559849 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
CHRNB4-204ENST00000559849 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
CHRNB4-204ENST00000559849 C9JAW5 83 aa8.3□□□□□ -1.08
CHRNB4-204ENST00000559849 TRBV7-7A0A0K0K1E9 115 aa8.29□□□□□ -1.08
CHRNB4-204ENST00000559849 DAND5Q8N907 189 aa8.29□□□□□ -1.08
CHRNB4-204ENST00000559849 M0R378 163 aa8.28□□□□□ -1.08
CHRNB4-204ENST00000559849 FAM240AA0A1B0GVK7 77 aa8.28□□□□□ -1.08
CHRNB4-204ENST00000559849 A4D1N5 150 aa8.28□□□□□ -1.08
CHRNB4-204ENST00000559849 RPL28P46779 137 aaKnown RBP8.28□□□□□ -1.08
CHRNB4-204ENST00000559849 RPS28P62857 69 aaKnown RBP8.28□□□□□ -1.08
CHRNB4-204ENST00000559849 OR13C6PQ8NH95 151 aa8.28□□□□□ -1.08
CHRNB4-204ENST00000559849 ATXN8Q156A1 80 aa8.27□□□□□ -1.09
CHRNB4-204ENST00000559849 IMUPQ9GZP8 106 aa8.27□□□□□ -1.09
CHRNB4-204ENST00000559849 NPC2P61916 151 aa8.26□□□□□ -1.09
CHRNB4-204ENST00000559849 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
CHRNB4-204ENST00000559849 C3orf22Q8N5N4 141 aa8.26□□□□□ -1.09
CHRNB4-204ENST00000559849 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
CHRNB4-204ENST00000559849 C9orf153Q5TBE3 101 aa8.25□□□□□ -1.09
CHRNB4-204ENST00000559849 UQCRQO14949 82 aa8.25□□□□□ -1.09
CHRNB4-204ENST00000559849 TNXBP22105 4242 aa8.25□□□□□ -1.09
CHRNB4-204ENST00000559849 H3BT86 120 aa8.24□□□□□ -1.09
CHRNB4-204ENST00000559849 EIF4EBP3O60516 100 aaPredicted RBP8.24□□□□□ -1.09
CHRNB4-204ENST00000559849 UBE2AP49459 152 aa8.24□□□□□ -1.09
CHRNB4-204ENST00000559849 LINC00308Q8TCZ7 52 aa8.24□□□□□ -1.09
CHRNB4-204ENST00000559849 NCR3O14931 201 aa8.23□□□□□ -1.09
CHRNB4-204ENST00000559849 COPS9Q8WXC6 57 aa8.23□□□□□ -1.09
CHRNB4-204ENST00000559849 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
CHRNB4-204ENST00000559849 TEX49A0A1B0GTD5 131 aa8.22□□□□□ -1.09
CHRNB4-204ENST00000559849 NDUFC2O95298 119 aa8.22□□□□□ -1.09
CHRNB4-204ENST00000559849 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
CHRNB4-204ENST00000559849 SOSTDC1Q6X4U4 206 aa8.22□□□□□ -1.09
CHRNB4-204ENST00000559849 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
CHRNB4-204ENST00000559849 TRBV10-3A0A0K0K1G6 114 aa8.2□□□□□ -1.1
CHRNB4-204ENST00000559849 ACYP1P07311 99 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms