RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 GLI2P10070 1586 aa0.78□□□□□ -2.29
SPG11-218ENST00000559754 PDE4DIPQ5VU43 2346 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 DOPEY1Q5JWR5 2465 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 FLNAP21333 2647 aaKnown RBP0.77□□□□□ -2.29
SPG11-218ENST00000559754 PDCD5O14737 125 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 SMIM13P0DJ93 91 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 COX6B1P14854 86 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 COX7BP24311 80 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 CRIPTQ9P021 101 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 CPS1P31327 1500 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 PREX1Q8TCU6 1659 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 USF3Q68DE3 2245 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 GOLGB1Q14789 3259 aaKnown RBP0.77□□□□□ -2.29
SPG11-218ENST00000559754 MUC3AQ02505 3323 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 SZT2Q5T011 3432 aa0.77□□□□□ -2.29
SPG11-218ENST00000559754 C2CD3Q4AC94 2353 aa0.76□□□□□ -2.29
SPG11-218ENST00000559754 PARP4Q9UKK3 1724 aaKnown RBP0.76□□□□□ -2.29
SPG11-218ENST00000559754 PLCH1Q4KWH8 1693 aa0.76□□□□□ -2.29
SPG11-218ENST00000559754 FANCD2Q9BXW9 1451 aa0.76□□□□□ -2.29
SPG11-218ENST00000559754 SPTY2D1-AS1A0A0U1RR47 76 aa0.76□□□□□ -2.29
SPG11-218ENST00000559754 COX8AP10176 69 aa0.76□□□□□ -2.29
SPG11-218ENST00000559754 WFDC9Q8NEX5 89 aa0.76□□□□□ -2.29
SPG11-218ENST00000559754 FBN2P35556 2912 aa0.76□□□□□ -2.29
SPG11-218ENST00000559754 EP400Q96L91 3159 aa0.75□□□□□ -2.29
SPG11-218ENST00000559754 KALRNO60229 2985 aa0.75□□□□□ -2.29
SPG11-218ENST00000559754 CICQ96RK0 1608 aaPredicted RBP0.75□□□□□ -2.29
SPG11-218ENST00000559754 ADAMTS12P58397 1594 aa0.75□□□□□ -2.29
SPG11-218ENST00000559754 CD163L1Q9NR16 1453 aa0.75□□□□□ -2.29
SPG11-218ENST00000559754 VCANP13611 3396 aa0.75□□□□□ -2.29
SPG11-218ENST00000559754 A0A087WXM4 84 aa0.75□□□□□ -2.29
SPG11-218ENST00000559754 UMAD1C9J7I0 102 aa0.75□□□□□ -2.29
SPG11-218ENST00000559754 IFI27P40305 119 aaPredicted RBP0.75□□□□□ -2.29
SPG11-218ENST00000559754 HIVEP3Q5T1R4 2406 aa0.75□□□□□ -2.29
SPG11-218ENST00000559754 ITSN1Q15811 1721 aa0.75□□□□□ -2.29
SPG11-218ENST00000559754 EIF2AK4Q9P2K8 1649 aaKnown RBP0.75□□□□□ -2.29
SPG11-218ENST00000559754 ZANQ9Y493 2812 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 RALGAPBQ86X10 1494 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 BDP1A6H8Y1 2624 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 BIRC6Q9NR09 4857 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 LAMA2P24043 3122 aaKnown RBP0.74□□□□□ -2.29
SPG11-218ENST00000559754 LRRK2Q5S007 2527 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 I3L3M4 83 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 RPL38P63173 70 aaKnown RBP0.74□□□□□ -2.29
SPG11-218ENST00000559754 SPINK6Q6UWN8 80 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 POLQO75417 2590 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 NWD1Q149M9 1564 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 CENPFP49454 3210 aa0.74□□□□□ -2.29
SPG11-218ENST00000559754 MKI67P46013 3256 aaKnown RBP0.73□□□□□ -2.29
SPG11-218ENST00000559754 CEP290O15078 2479 aa0.73□□□□□ -2.29
SPG11-218ENST00000559754 DEFA5Q01523 94 aa0.73□□□□□ -2.29
SPG11-218ENST00000559754 ANKRD11Q6UB99 2663 aaPredicted RBP0.73□□□□□ -2.29
SPG11-218ENST00000559754 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
SPG11-218ENST00000559754 DUOX2Q9NRD8 1548 aa0.73□□□□□ -2.29
SPG11-218ENST00000559754 PTPRZ1P23471 2315 aaPredicted RBP0.72□□□□□ -2.29
SPG11-218ENST00000559754 CACNA1EQ15878 2313 aa0.72□□□□□ -2.29
SPG11-218ENST00000559754 WIZO95785 1651 aa0.72□□□□□ -2.29
SPG11-218ENST00000559754 IFI6P09912 130 aa0.72□□□□□ -2.29
SPG11-218ENST00000559754 KRTAP20-1Q3LI63 56 aa0.72□□□□□ -2.29
SPG11-218ENST00000559754 SPTBN2O15020 2390 aa0.72□□□□□ -2.29
SPG11-218ENST00000559754 CELSR2Q9HCU4 2923 aa0.72□□□□□ -2.29
SPG11-218ENST00000559754 AGLP35573 1532 aa0.72□□□□□ -2.29
SPG11-218ENST00000559754 TNCP24821 2201 aa0.72□□□□□ -2.29
SPG11-218ENST00000559754 CLIP1P30622 1438 aa0.72□□□□□ -2.29
SPG11-218ENST00000559754 LAMA3Q16787 3333 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 COL12A1Q99715 3063 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 PTPRQQ9UMZ3 2332 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 UNC80Q8N2C7 3258 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 FASNP49327 2511 aaKnown RBP0.71□□□□□ -2.3
SPG11-218ENST00000559754 LCE6AA0A183 80 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 CPSF4LA6NMK7 179 aaKnown RBP0.71□□□□□ -2.3
SPG11-218ENST00000559754 SPRR1AP35321 89 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 SPTA1P02549 2419 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 RICTORQ6R327 1708 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 CNOT1A5YKK6 2376 aaKnown RBP0.71□□□□□ -2.3
SPG11-218ENST00000559754 TPRP12270 2363 aaKnown RBP0.71□□□□□ -2.3
SPG11-218ENST00000559754 AKAP13Q12802 2813 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 STAB2Q8WWQ8 2551 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 RANBP2P49792 3224 aaKnown RBP0.71□□□□□ -2.3
SPG11-218ENST00000559754 ITPR1Q14643 2758 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 PIEZO2Q9H5I5 2752 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 ANKRD50Q9ULJ7 1429 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 MROH1Q8NDA8 1641 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 HMCN2Q8NDA2 5059 aa0.71□□□□□ -2.3
SPG11-218ENST00000559754 GCN1Q92616 2671 aaKnown RBP0.71□□□□□ -2.3
SPG11-218ENST00000559754 BOD1L1Q8NFC6 3051 aa0.7□□□□□ -2.3
SPG11-218ENST00000559754 F8P00451 2351 aa0.7□□□□□ -2.3
SPG11-218ENST00000559754 EFCAB5A4FU69 1503 aa0.7□□□□□ -2.3
SPG11-218ENST00000559754 TNRC6CQ9HCJ0 1690 aaKnown RBP0.7□□□□□ -2.3
SPG11-218ENST00000559754 PRH1P02810 166 aa0.7□□□□□ -2.3
SPG11-218ENST00000559754 HMGA1P17096 107 aaKnown RBP0.7□□□□□ -2.3
SPG11-218ENST00000559754 MRPL34Q9BQ48 92 aaKnown RBP0.7□□□□□ -2.3
SPG11-218ENST00000559754 DNHD1Q96M86 4753 aa0.7□□□□□ -2.3
SPG11-218ENST00000559754 MROH2BQ7Z745 1585 aa0.7□□□□□ -2.3
SPG11-218ENST00000559754 ZFHX4Q86UP3 3567 aa0.7□□□□□ -2.3
SPG11-218ENST00000559754 DDX60LQ5H9U9 1706 aaKnown RBP0.69□□□□□ -2.3
SPG11-218ENST00000559754 EYSQ5T1H1 3165 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 C5orf42Q9H799 3197 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 ERICH3Q5RHP9 1530 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 REV3LO60673 3130 aa0.69□□□□□ -2.3
SPG11-218ENST00000559754 CCL22O00626 93 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms