RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 LRP1BQ9NZR2 4599 aa10.87□□□□□ -0.67
CHRNA3-206ENST00000559658 DYNC1H1Q14204 4646 aaKnown RBP10.87□□□□□ -0.67
CHRNA3-206ENST00000559658 K7EP34 96 aa10.85□□□□□ -0.67
CHRNA3-206ENST00000559658 ZNF73O43830 326 aaPredicted RBP10.85□□□□□ -0.67
CHRNA3-206ENST00000559658 EPM2AB3EWF7 344 aa10.84□□□□□ -0.67
CHRNA3-206ENST00000559658 MTURNQ8N3F0 131 aa10.84□□□□□ -0.67
CHRNA3-206ENST00000559658 KCNQ1DNQ9H478 68 aa10.84□□□□□ -0.67
CHRNA3-206ENST00000559658 H3BMG7 143 aa10.83□□□□□ -0.68
CHRNA3-206ENST00000559658 Q6ZSA8 131 aa10.83□□□□□ -0.68
CHRNA3-206ENST00000559658 PLAC8Q9NZF1 115 aa10.83□□□□□ -0.68
CHRNA3-206ENST00000559658 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
CHRNA3-206ENST00000559658 COX6CP09669 75 aa10.81□□□□□ -0.68
CHRNA3-206ENST00000559658 SCXQ7RTU7 201 aa10.81□□□□□ -0.68
CHRNA3-206ENST00000559658 CIRBP-AS1Q8TBR5 109 aa10.81□□□□□ -0.68
CHRNA3-206ENST00000559658 KRTAP4-16G5E9R7 235 aaPredicted RBP10.8□□□□□ -0.68
CHRNA3-206ENST00000559658 LST1O00453 97 aa10.79□□□□□ -0.68
CHRNA3-206ENST00000559658 UBE2BP63146 152 aa10.79□□□□□ -0.68
CHRNA3-206ENST00000559658 PRYO14603 147 aa10.78□□□□□ -0.68
CHRNA3-206ENST00000559658 SPRR1AP35321 89 aa10.78□□□□□ -0.68
CHRNA3-206ENST00000559658 LYRM7Q5U5X0 104 aa10.78□□□□□ -0.68
CHRNA3-206ENST00000559658 ELOF1P60002 83 aaKnown RBP10.77□□□□□ -0.69
CHRNA3-206ENST00000559658 UBE2V1Q13404 147 aa10.77□□□□□ -0.69
CHRNA3-206ENST00000559658 REG3GQ6UW15 175 aa10.76□□□□□ -0.69
CHRNA3-206ENST00000559658 ATXN8Q156A1 80 aa10.76□□□□□ -0.69
CHRNA3-206ENST00000559658 GTF2H5Q6ZYL4 71 aa10.76□□□□□ -0.69
CHRNA3-206ENST00000559658 TRBV20-1A0A075B6N2 111 aa10.75□□□□□ -0.69
CHRNA3-206ENST00000559658 COX7BP24311 80 aa10.75□□□□□ -0.69
CHRNA3-206ENST00000559658 APOBP04114 4563 aaKnown RBP10.75□□□□□ -0.69
CHRNA3-206ENST00000559658 LINC00528Q8N1L1 170 aa10.74□□□□□ -0.69
CHRNA3-206ENST00000559658 B5MCH6 92 aa10.74□□□□□ -0.69
CHRNA3-206ENST00000559658 H0YGX0 51 aa10.74□□□□□ -0.69
CHRNA3-206ENST00000559658 LINC00575Q6W349 94 aa10.74□□□□□ -0.69
CHRNA3-206ENST00000559658 SRRM2Q9UQ35 2752 aaKnown RBP10.74□□□□□ -0.69
CHRNA3-206ENST00000559658 PRLHP81277 87 aa10.73□□□□□ -0.69
CHRNA3-206ENST00000559658 PRO0461Q9UI25 63 aa10.73□□□□□ -0.69
CHRNA3-206ENST00000559658 Q9BRP9 147 aa10.72□□□□□ -0.69
CHRNA3-206ENST00000559658 C9JAW5 83 aa10.72□□□□□ -0.69
CHRNA3-206ENST00000559658 Q6ZRX8 168 aa10.72□□□□□ -0.69
CHRNA3-206ENST00000559658 ETDCA0A1B0GVM5 59 aa10.71□□□□□ -0.69
CHRNA3-206ENST00000559658 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
CHRNA3-206ENST00000559658 TRBV7-6A0A0J9YX20 115 aa10.7□□□□□ -0.7
CHRNA3-206ENST00000559658 FAM19A1Q7Z5A9 133 aa10.7□□□□□ -0.7
CHRNA3-206ENST00000559658 PSORS1C2Q9UIG4 136 aa10.7□□□□□ -0.7
CHRNA3-206ENST00000559658 EPPK1P58107 5090 aaKnown RBP10.7□□□□□ -0.7
CHRNA3-206ENST00000559658 CBY1Q9Y3M2 126 aa10.7□□□□□ -0.7
CHRNA3-206ENST00000559658 TRACP01848 142 aa10.69□□□□□ -0.7
CHRNA3-206ENST00000559658 hADV29S1A0JD25 119 aa10.68□□□□□ -0.7
CHRNA3-206ENST00000559658 ERC2-IT1O76042 136 aa10.68□□□□□ -0.7
CHRNA3-206ENST00000559658 SMCR5Q8TEV8 140 aa10.68□□□□□ -0.7
CHRNA3-206ENST00000559658 XGP55808 180 aa10.66□□□□□ -0.7
CHRNA3-206ENST00000559658 Q6ZQY7 126 aa10.66□□□□□ -0.7
CHRNA3-206ENST00000559658 SLC25A20O43772 301 aa10.65□□□□□ -0.7
CHRNA3-206ENST00000559658 BCE1O60756 84 aa10.65□□□□□ -0.7
CHRNA3-206ENST00000559658 KRTAP13-1Q8IUC0 172 aa10.64□□□□□ -0.71
CHRNA3-206ENST00000559658 DNAL4O96015 105 aa10.64□□□□□ -0.71
CHRNA3-206ENST00000559658 C1orf137Q5JT78 98 aa10.64□□□□□ -0.71
CHRNA3-206ENST00000559658 ST20-AS1Q8NBB2 130 aa10.64□□□□□ -0.71
CHRNA3-206ENST00000559658 HIGD2AQ9BW72 106 aa10.63□□□□□ -0.71
CHRNA3-206ENST00000559658 A0A1B0GX51 115 aa10.61□□□□□ -0.71
CHRNA3-206ENST00000559658 UBE2AP49459 152 aa10.61□□□□□ -0.71
CHRNA3-206ENST00000559658 VPS13BQ7Z7G8 4022 aa10.61□□□□□ -0.71
CHRNA3-206ENST00000559658 FAT1Q14517 4588 aa10.6□□□□□ -0.71
CHRNA3-206ENST00000559658 F8W1H4 67 aa10.59□□□□□ -0.71
CHRNA3-206ENST00000559658 BAALC-AS2P0C853 105 aa10.59□□□□□ -0.71
CHRNA3-206ENST00000559658 ANKRD29Q8N6D5 301 aa10.59□□□□□ -0.71
CHRNA3-206ENST00000559658 DHRS4-AS1Q9P1J3 65 aa10.59□□□□□ -0.71
CHRNA3-206ENST00000559658 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
CHRNA3-206ENST00000559658 ORMDL1Q9P0S3 153 aa10.59□□□□□ -0.71
CHRNA3-206ENST00000559658 A0A1B0GV72 72 aa10.57□□□□□ -0.72
CHRNA3-206ENST00000559658 LINC01547P58512 204 aaPredicted RBP10.57□□□□□ -0.72
CHRNA3-206ENST00000559658 ETDBQ3ZM63 59 aa10.57□□□□□ -0.72
CHRNA3-206ENST00000559658 H0Y9J4 135 aa10.57□□□□□ -0.72
CHRNA3-206ENST00000559658 INAFM2P0DMQ5 153 aa10.57□□□□□ -0.72
CHRNA3-206ENST00000559658 DEFB105AQ8NG35 78 aa10.57□□□□□ -0.72
CHRNA3-206ENST00000559658 H3BT86 120 aa10.56□□□□□ -0.72
CHRNA3-206ENST00000559658 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.56□□□□□ -0.72
CHRNA3-206ENST00000559658 IGLV7-43P04211 117 aa10.55□□□□□ -0.72
CHRNA3-206ENST00000559658 HSPG2P98160 4391 aa10.54□□□□□ -0.72
CHRNA3-206ENST00000559658 C3orf22Q8N5N4 141 aa10.54□□□□□ -0.72
CHRNA3-206ENST00000559658 LINC01600Q96MT4 127 aa10.53□□□□□ -0.72
CHRNA3-206ENST00000559658 KIAA1109Q2LD37 5005 aa10.53□□□□□ -0.72
CHRNA3-206ENST00000559658 SNCGO76070 127 aa10.53□□□□□ -0.72
CHRNA3-206ENST00000559658 Q8N377 158 aa10.53□□□□□ -0.72
CHRNA3-206ENST00000559658 ZNF861PO60384 105 aa10.51□□□□□ -0.73
CHRNA3-206ENST00000559658 TEX49A0A1B0GTD5 131 aa10.51□□□□□ -0.73
CHRNA3-206ENST00000559658 IGLV5-48A0A075B6I7 105 aa10.5□□□□□ -0.73
CHRNA3-206ENST00000559658 RYR1P21817 5038 aa10.5□□□□□ -0.73
CHRNA3-206ENST00000559658 TEN1Q86WV5 123 aa10.49□□□□□ -0.73
CHRNA3-206ENST00000559658 TMEM256-PLSCR3K7ERE1 68 aa10.48□□□□□ -0.73
CHRNA3-206ENST00000559658 KRTAP17-1Q9BYP8 105 aa10.47□□□□□ -0.73
CHRNA3-206ENST00000559658 RPL37AP61513 92 aaKnown RBP10.47□□□□□ -0.73
CHRNA3-206ENST00000559658 GAGE2AQ6NT46 116 aa10.47□□□□□ -0.73
CHRNA3-206ENST00000559658 KRTAP10-4P60372 401 aaPredicted RBP10.46□□□□□ -0.74
CHRNA3-206ENST00000559658 OCIAD2Q56VL3 154 aa10.45□□□□□ -0.74
CHRNA3-206ENST00000559658 SMIM29Q86T20 159 aa10.45□□□□□ -0.74
CHRNA3-206ENST00000559658 ANAPC11Q9NYG5 84 aa10.45□□□□□ -0.74
CHRNA3-206ENST00000559658 SPRR4Q96PI1 79 aa10.44□□□□□ -0.74
CHRNA3-206ENST00000559658 LAMTOR3Q9UHA4 124 aa10.44□□□□□ -0.74
CHRNA3-206ENST00000559658 OBSCN-AS1Q96MR7 158 aa10.43□□□□□ -0.74
CHRNA3-206ENST00000559658 C14orf132Q9NPU4 83 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms