RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
TPM1-217ENST00000559108 B5MCH6 92 aa6.52□□□□□ -1.37
TPM1-217ENST00000559108 S100A7L2Q5SY68 101 aa6.52□□□□□ -1.37
TPM1-217ENST00000559108 SMCR5Q8TEV8 140 aa6.52□□□□□ -1.37
TPM1-217ENST00000559108 HIST1H4GQ99525 98 aa6.52□□□□□ -1.37
TPM1-217ENST00000559108 Q9BRP9 147 aa6.52□□□□□ -1.37
TPM1-217ENST00000559108 PRO1933Q9H354 126 aa6.52□□□□□ -1.37
TPM1-217ENST00000559108 ERC2-IT1O76042 136 aa6.51□□□□□ -1.37
TPM1-217ENST00000559108 SMIM6P0DI80 62 aa6.51□□□□□ -1.37
TPM1-217ENST00000559108 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
TPM1-217ENST00000559108 UBE2AP49459 152 aa6.51□□□□□ -1.37
TPM1-217ENST00000559108 OR13C6PQ8NH95 151 aa6.51□□□□□ -1.37
TPM1-217ENST00000559108 DIRC1Q969H9 104 aa6.51□□□□□ -1.37
TPM1-217ENST00000559108 LINC01600Q96MT4 127 aa6.51□□□□□ -1.37
TPM1-217ENST00000559108 ANAPC11Q9NYG5 84 aa6.51□□□□□ -1.37
TPM1-217ENST00000559108 ZNF73O43830 326 aaPredicted RBP6.5□□□□□ -1.37
TPM1-217ENST00000559108 FXYD2P54710 66 aa6.5□□□□□ -1.37
TPM1-217ENST00000559108 Q6ZRX8 168 aa6.49□□□□□ -1.37
TPM1-217ENST00000559108 LINC00518Q8N0U6 118 aa6.49□□□□□ -1.37
TPM1-217ENST00000559108 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
TPM1-217ENST00000559108 HIGD2AQ9BW72 106 aa6.49□□□□□ -1.37
TPM1-217ENST00000559108 DMBT1Q9UGM3 2413 aaPredicted RBP6.49□□□□□ -1.37
TPM1-217ENST00000559108 A0A087X002 238 aa6.48□□□□□ -1.37
TPM1-217ENST00000559108 ETDCA0A1B0GVM5 59 aa6.48□□□□□ -1.37
TPM1-217ENST00000559108 A6NDN8 102 aa6.48□□□□□ -1.37
TPM1-217ENST00000559108 OXTP01178 125 aa6.48□□□□□ -1.37
TPM1-217ENST00000559108 KRTAP10-8P60410 259 aa6.48□□□□□ -1.37
TPM1-217ENST00000559108 UQCR10Q9UDW1 63 aa6.48□□□□□ -1.37
TPM1-217ENST00000559108 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
TPM1-217ENST00000559108 CFC1P0CG37 223 aa6.47□□□□□ -1.37
TPM1-217ENST00000559108 S100A12P80511 92 aa6.47□□□□□ -1.37
TPM1-217ENST00000559108 C6orf99Q4VX62 202 aa6.47□□□□□ -1.37
TPM1-217ENST00000559108 CEND1Q8N111 149 aa6.47□□□□□ -1.37
TPM1-217ENST00000559108 SMIM11BQ8TCY0 68 aa6.47□□□□□ -1.37
TPM1-217ENST00000559108 TAL2Q16559 108 aa6.46□□□□□ -1.38
TPM1-217ENST00000559108 KRTAP13-2Q52LG2 175 aa6.46□□□□□ -1.38
TPM1-217ENST00000559108 COPS9Q8WXC6 57 aa6.46□□□□□ -1.38
TPM1-217ENST00000559108 RPL13AP40429 203 aaKnown RBP6.45□□□□□ -1.38
TPM1-217ENST00000559108 ELOF1P60002 83 aaKnown RBP6.45□□□□□ -1.38
TPM1-217ENST00000559108 ST20-AS1Q8NBB2 130 aa6.45□□□□□ -1.38
TPM1-217ENST00000559108 SPRR4Q96PI1 79 aa6.45□□□□□ -1.38
TPM1-217ENST00000559108 TRAV13-2A0A0B4J235 113 aa6.44□□□□□ -1.38
TPM1-217ENST00000559108 K7ERJ3 54 aa6.44□□□□□ -1.38
TPM1-217ENST00000559108 HSD52Q0P140 79 aa6.44□□□□□ -1.38
TPM1-217ENST00000559108 HERC1Q15751 4861 aa6.43□□□□□ -1.38
TPM1-217ENST00000559108 J3QL48 77 aa6.43□□□□□ -1.38
TPM1-217ENST00000559108 A0A0B4J2C4 111 aa6.42□□□□□ -1.38
TPM1-217ENST00000559108 COX7BP24311 80 aa6.42□□□□□ -1.38
TPM1-217ENST00000559108 H7C2G1 150 aa6.41□□□□□ -1.38
TPM1-217ENST00000559108 C3orf22Q8N5N4 141 aa6.41□□□□□ -1.38
TPM1-217ENST00000559108 TRBV7-6A0A0J9YX20 115 aa6.4□□□□□ -1.38
TPM1-217ENST00000559108 A0A1B0GWB2 263 aa6.4□□□□□ -1.38
TPM1-217ENST00000559108 LINC00483Q53H64 154 aa6.4□□□□□ -1.38
TPM1-217ENST00000559108 BVES-AS1Q5T3Y7 98 aa6.4□□□□□ -1.38
TPM1-217ENST00000559108 NHP2Q9NX24 153 aaKnown RBP6.4□□□□□ -1.38
TPM1-217ENST00000559108 LINC01547P58512 204 aaPredicted RBP6.39□□□□□ -1.39
TPM1-217ENST00000559108 CTAG1AP78358 180 aa6.39□□□□□ -1.39
TPM1-217ENST00000559108 FAM229BQ4G0N7 80 aa6.39□□□□□ -1.39
TPM1-217ENST00000559108 GAGE2AQ6NT46 116 aa6.39□□□□□ -1.39
TPM1-217ENST00000559108 RAB37Q96AX2 223 aa6.38□□□□□ -1.39
TPM1-217ENST00000559108 FAM218AQ96MZ4 157 aa6.38□□□□□ -1.39
TPM1-217ENST00000559108 PRO1854Q9UHT4 67 aa6.37□□□□□ -1.39
TPM1-217ENST00000559108 CBY1Q9Y3M2 126 aa6.37□□□□□ -1.39
TPM1-217ENST00000559108 CRYGAP11844 174 aa6.36□□□□□ -1.39
TPM1-217ENST00000559108 HINT1P49773 126 aaPredicted RBP6.36□□□□□ -1.39
TPM1-217ENST00000559108 LINC00575Q6W349 94 aa6.36□□□□□ -1.39
TPM1-217ENST00000559108 DHRS4-AS1Q9P1J3 65 aa6.36□□□□□ -1.39
TPM1-217ENST00000559108 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
TPM1-217ENST00000559108 A6NJY4 79 aa6.35□□□□□ -1.39
TPM1-217ENST00000559108 TRIAP1O43715 76 aa6.35□□□□□ -1.39
TPM1-217ENST00000559108 TSPAN13O95857 204 aa6.35□□□□□ -1.39
TPM1-217ENST00000559108 SPRR1BP22528 89 aa6.35□□□□□ -1.39
TPM1-217ENST00000559108 ZNF706Q9Y5V0 76 aaPredicted RBP6.35□□□□□ -1.39
TPM1-217ENST00000559108 IGLV5-48A0A075B6I7 105 aa6.34□□□□□ -1.39
TPM1-217ENST00000559108 TSTD3H0UI37 97 aa6.34□□□□□ -1.39
TPM1-217ENST00000559108 SMIM29Q86T20 159 aa6.34□□□□□ -1.39
TPM1-217ENST00000559108 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
TPM1-217ENST00000559108 Q1RN00 199 aa6.32□□□□□ -1.4
TPM1-217ENST00000559108 Q8N377 158 aa6.32□□□□□ -1.4
TPM1-217ENST00000559108 DEFB105AQ8NG35 78 aa6.32□□□□□ -1.4
TPM1-217ENST00000559108 IGLV9-49A0A0B4J1Y8 123 aa6.31□□□□□ -1.4
TPM1-217ENST00000559108 MOBPQ13875 183 aa6.31□□□□□ -1.4
TPM1-217ENST00000559108 Q6ZQY7 126 aa6.31□□□□□ -1.4
TPM1-217ENST00000559108 CLEC2BQ92478 149 aa6.31□□□□□ -1.4
TPM1-217ENST00000559108 A0A0G2JQZ4 141 aa6.3□□□□□ -1.4
TPM1-217ENST00000559108 Q8NBF4 154 aa6.3□□□□□ -1.4
TPM1-217ENST00000559108 NAA38Q9BRA0 125 aaKnown RBP6.3□□□□□ -1.4
TPM1-217ENST00000559108 HMCN2Q8NDA2 5059 aa6.29□□□□□ -1.4
TPM1-217ENST00000559108 hADV29S1A0JD25 119 aa6.29□□□□□ -1.4
TPM1-217ENST00000559108 VAMP3Q15836 100 aa6.29□□□□□ -1.4
TPM1-217ENST00000559108 TEX49A0A1B0GTD5 131 aa6.28□□□□□ -1.4
TPM1-217ENST00000559108 M0R143 59 aa6.28□□□□□ -1.4
TPM1-217ENST00000559108 LINC00304Q8N9R0 145 aa6.28□□□□□ -1.4
TPM1-217ENST00000559108 BATFQ16520 125 aa6.27□□□□□ -1.41
TPM1-217ENST00000559108 H0YGX0 51 aa6.26□□□□□ -1.41
TPM1-217ENST00000559108 SLC25A20O43772 301 aa6.25□□□□□ -1.41
TPM1-217ENST00000559108 PSMB2P49721 201 aa6.25□□□□□ -1.41
TPM1-217ENST00000559108 C9orf153Q5TBE3 101 aa6.25□□□□□ -1.41
TPM1-217ENST00000559108 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.25□□□□□ -1.41
TPM1-217ENST00000559108 SNHG12Q9BXW3 62 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms