RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 PLEKHB2Q96CS7 222 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 MAP1LC3CQ9BXW4 147 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 TMEM126AQ9H061 195 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 J3QQQ9 107 aa3.57□□□□□ -1.84
CTDSPL2-204ENST00000558966 UBE2AP49459 152 aa3.57□□□□□ -1.84
CTDSPL2-204ENST00000558966 HERVK_113P61574 105 aa3.57□□□□□ -1.84
CTDSPL2-204ENST00000558966 PRLHP81277 87 aa3.57□□□□□ -1.84
CTDSPL2-204ENST00000558966 A0A087X002 238 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 SYS1-DBNDD2H3BUS1 97 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 COA6Q5JTJ3 125 aaKnown RBP3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 BOD1L2Q8IYS8 172 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 DAND5Q8N907 189 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 LPAP08519 4548 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 LINC00587B1AMM8 73 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 NCR3O14931 201 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 ATP6V1G1O75348 118 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 RPL13AP40429 203 aaKnown RBP3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 NMUP48645 174 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 FAM19A1Q7Z5A9 133 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 ANAPC11Q9NYG5 84 aa3.56□□□□□ -1.84
CTDSPL2-204ENST00000558966 LOC107984156A0A0G2JMH3 177 aa3.55□□□□□ -1.84
CTDSPL2-204ENST00000558966 E9PLD3 99 aa3.55□□□□□ -1.84
CTDSPL2-204ENST00000558966 LGALS3P17931 250 aaKnown RBP3.55□□□□□ -1.84
CTDSPL2-204ENST00000558966 ARL17AQ8IVW1 177 aa3.55□□□□□ -1.84
CTDSPL2-204ENST00000558966 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
CTDSPL2-204ENST00000558966 IGKV2D-26A0A0A0MRZ7 120 aa3.54□□□□□ -1.84
CTDSPL2-204ENST00000558966 C3orf79P0CE67 100 aa3.54□□□□□ -1.84
CTDSPL2-204ENST00000558966 KRTAP13-2Q52LG2 175 aa3.54□□□□□ -1.84
CTDSPL2-204ENST00000558966 A0A0J9YXY3 114 aa3.54□□□□□ -1.84
CTDSPL2-204ENST00000558966 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
CTDSPL2-204ENST00000558966 CRYGAP11844 174 aa3.54□□□□□ -1.84
CTDSPL2-204ENST00000558966 SPRR1AP35321 89 aa3.54□□□□□ -1.84
CTDSPL2-204ENST00000558966 SOSTDC1Q6X4U4 206 aa3.54□□□□□ -1.84
CTDSPL2-204ENST00000558966 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
CTDSPL2-204ENST00000558966 FAM229BQ4G0N7 80 aa3.53□□□□□ -1.84
CTDSPL2-204ENST00000558966 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
CTDSPL2-204ENST00000558966 HIGD2AQ9BW72 106 aa3.53□□□□□ -1.84
CTDSPL2-204ENST00000558966 KCNQ1DNQ9H478 68 aa3.53□□□□□ -1.84
CTDSPL2-204ENST00000558966 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 KRTDAPP60985 99 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 LINC00337Q8N6G1 96 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 TYMSOSQ8TAI1 123 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 LITAFQ99732 161 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 TTTY13Q9BZ97 58 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 NDUFC2O95298 119 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 DDTP30046 118 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 NPC2P61916 151 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 MIEN1Q9BRT3 115 aa3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 SPANXB1Q9NS25 103 aaPredicted RBP3.52□□□□□ -1.85
CTDSPL2-204ENST00000558966 ETDCA0A1B0GVM5 59 aa3.51□□□□□ -1.85
CTDSPL2-204ENST00000558966 SMCR5Q8TEV8 140 aa3.51□□□□□ -1.85
CTDSPL2-204ENST00000558966 SPRR4Q96PI1 79 aa3.51□□□□□ -1.85
CTDSPL2-204ENST00000558966 ZNF815PA8K554 130 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 TIMM17BO60830 172 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 TSPAN13O95857 204 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 IGLV6-57P01721 117 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 S100A1P23297 94 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 C3orf22Q8N5N4 141 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 C20orf202A1L168 122 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 ATOH7Q8N100 152 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 HIST3H2BBQ8N257 126 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 LINC00308Q8TCZ7 52 aa3.5□□□□□ -1.85
CTDSPL2-204ENST00000558966 S100A7L2Q5SY68 101 aa3.49□□□□□ -1.85
CTDSPL2-204ENST00000558966 LINC00304Q8N9R0 145 aa3.49□□□□□ -1.85
CTDSPL2-204ENST00000558966 FAM218AQ96MZ4 157 aa3.49□□□□□ -1.85
CTDSPL2-204ENST00000558966 Q9BRP9 147 aa3.49□□□□□ -1.85
CTDSPL2-204ENST00000558966 SPANXCQ9NY87 97 aa3.49□□□□□ -1.85
CTDSPL2-204ENST00000558966 TRAV23DV6A0A075B6W5 121 aa3.48□□□□□ -1.85
CTDSPL2-204ENST00000558966 ERC2-IT1O76042 136 aa3.48□□□□□ -1.85
CTDSPL2-204ENST00000558966 S100A12P80511 92 aa3.48□□□□□ -1.85
CTDSPL2-204ENST00000558966 PRR4Q16378 134 aa3.48□□□□□ -1.85
CTDSPL2-204ENST00000558966 Q6ZRX8 168 aa3.48□□□□□ -1.85
CTDSPL2-204ENST00000558966 HIST1H2BLQ99880 126 aa3.48□□□□□ -1.85
CTDSPL2-204ENST00000558966 ZNF706Q9Y5V0 76 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL2-204ENST00000558966 ZNF73O43830 326 aaPredicted RBP3.47□□□□□ -1.85
CTDSPL2-204ENST00000558966 LINC00483Q53H64 154 aa3.47□□□□□ -1.85
CTDSPL2-204ENST00000558966 PCP2Q8IVA1 136 aa3.47□□□□□ -1.85
CTDSPL2-204ENST00000558966 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
CTDSPL2-204ENST00000558966 SPANXDQ9BXN6 97 aa3.47□□□□□ -1.85
CTDSPL2-204ENST00000558966 AKR1D1P51857 326 aa3.46□□□□□ -1.86
CTDSPL2-204ENST00000558966 SCGB1D4Q6XE38 83 aa3.46□□□□□ -1.86
CTDSPL2-204ENST00000558966 RETNLBQ9BQ08 111 aa3.46□□□□□ -1.86
CTDSPL2-204ENST00000558966 MUC2Q02817 5179 aa3.46□□□□□ -1.86
CTDSPL2-204ENST00000558966 S100A2P29034 98 aa3.45□□□□□ -1.86
CTDSPL2-204ENST00000558966 OR13C6PQ8NH95 151 aa3.45□□□□□ -1.86
CTDSPL2-204ENST00000558966 S100A6P06703 90 aa3.45□□□□□ -1.86
CTDSPL2-204ENST00000558966 CTAG1AP78358 180 aa3.45□□□□□ -1.86
CTDSPL2-204ENST00000558966 JOSD1Q15040 202 aaPredicted RBP3.45□□□□□ -1.86
CTDSPL2-204ENST00000558966 Q6ZVQ6 151 aa3.45□□□□□ -1.86
CTDSPL2-204ENST00000558966 Q8NBF4 154 aa3.45□□□□□ -1.86
CTDSPL2-204ENST00000558966 IFITM1P13164 125 aa3.44□□□□□ -1.86
CTDSPL2-204ENST00000558966 MOBPQ13875 183 aa3.44□□□□□ -1.86
CTDSPL2-204ENST00000558966 LINC00518Q8N0U6 118 aa3.44□□□□□ -1.86
CTDSPL2-204ENST00000558966 ST20-AS1Q8NBB2 130 aa3.44□□□□□ -1.86
CTDSPL2-204ENST00000558966 CBY1Q9Y3M2 126 aa3.44□□□□□ -1.86
CTDSPL2-204ENST00000558966 SPAG11AQ6PDA7 123 aa3.43□□□□□ -1.86
CTDSPL2-204ENST00000558966 Q6ZVH6 145 aa3.43□□□□□ -1.86
CTDSPL2-204ENST00000558966 MUSTN1Q8IVN3 82 aa3.43□□□□□ -1.86
CTDSPL2-204ENST00000558966 CFC1BP0CG36 223 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms