RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.58□□□□□ -1.04
SMAD6-203ENST00000558937 FP248Q71RG6 208 aaPredicted RBP8.58□□□□□ -1.04
SMAD6-203ENST00000558937 HIST1H2BHQ93079 126 aa8.58□□□□□ -1.04
SMAD6-203ENST00000558937 HIST1H2BNQ99877 126 aa8.58□□□□□ -1.04
SMAD6-203ENST00000558937 HIST1H2BMQ99879 126 aa8.58□□□□□ -1.04
SMAD6-203ENST00000558937 IGLV9-49A0A0B4J1Y8 123 aa8.57□□□□□ -1.04
SMAD6-203ENST00000558937 MOBPQ13875 183 aa8.57□□□□□ -1.04
SMAD6-203ENST00000558937 SPINK1P00995 79 aa8.56□□□□□ -1.04
SMAD6-203ENST00000558937 MUC17Q685J3 4493 aa8.55□□□□□ -1.04
SMAD6-203ENST00000558937 MUC2Q02817 5179 aa8.55□□□□□ -1.04
SMAD6-203ENST00000558937 ZNF73O43830 326 aaPredicted RBP8.55□□□□□ -1.04
SMAD6-203ENST00000558937 LINC01545Q5VT33 79 aa8.55□□□□□ -1.04
SMAD6-203ENST00000558937 JOSD1Q15040 202 aaPredicted RBP8.54□□□□□ -1.04
SMAD6-203ENST00000558937 SSBP3-AS1Q7Z2R9 100 aa8.54□□□□□ -1.04
SMAD6-203ENST00000558937 LITAFQ99732 161 aa8.54□□□□□ -1.04
SMAD6-203ENST00000558937 PET117Q6UWS5 81 aa8.53□□□□□ -1.04
SMAD6-203ENST00000558937 LINC00308Q8TCZ7 52 aa8.53□□□□□ -1.04
SMAD6-203ENST00000558937 TIMM17BO60830 172 aa8.52□□□□□ -1.05
SMAD6-203ENST00000558937 KRTAP13-3Q3SY46 172 aa8.52□□□□□ -1.05
SMAD6-203ENST00000558937 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
SMAD6-203ENST00000558937 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
SMAD6-203ENST00000558937 TTTY13Q9BZ97 58 aa8.51□□□□□ -1.05
SMAD6-203ENST00000558937 ZNF815PA8K554 130 aa8.5□□□□□ -1.05
SMAD6-203ENST00000558937 ST20-AS1Q8NBB2 130 aa8.5□□□□□ -1.05
SMAD6-203ENST00000558937 CBY1Q9Y3M2 126 aa8.5□□□□□ -1.05
SMAD6-203ENST00000558937 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
SMAD6-203ENST00000558937 C9orf153Q5TBE3 101 aa8.49□□□□□ -1.05
SMAD6-203ENST00000558937 Q8N377 158 aa8.49□□□□□ -1.05
SMAD6-203ENST00000558937 OR13C6PQ8NH95 151 aa8.49□□□□□ -1.05
SMAD6-203ENST00000558937 HINT1P49773 126 aaPredicted RBP8.48□□□□□ -1.05
SMAD6-203ENST00000558937 LCE2AQ5TA79 106 aaPredicted RBP8.47□□□□□ -1.05
SMAD6-203ENST00000558937 SPANXDQ9BXN6 97 aa8.47□□□□□ -1.05
SMAD6-203ENST00000558937 C5orf52A6NGY3 159 aa8.46□□□□□ -1.06
SMAD6-203ENST00000558937 COA6Q5JTJ3 125 aaKnown RBP8.46□□□□□ -1.06
SMAD6-203ENST00000558937 SLC25A20O43772 301 aa8.45□□□□□ -1.06
SMAD6-203ENST00000558937 KRTDAPP60985 99 aa8.45□□□□□ -1.06
SMAD6-203ENST00000558937 SPRR1BP22528 89 aa8.44□□□□□ -1.06
SMAD6-203ENST00000558937 ASB16-AS1Q495Z4 193 aa8.43□□□□□ -1.06
SMAD6-203ENST00000558937 DHRS4-AS1Q9P1J3 65 aa8.43□□□□□ -1.06
SMAD6-203ENST00000558937 FAT4Q6V0I7 4981 aa8.43□□□□□ -1.06
SMAD6-203ENST00000558937 COX7BP24311 80 aa8.42□□□□□ -1.06
SMAD6-203ENST00000558937 ELOF1P60002 83 aaKnown RBP8.42□□□□□ -1.06
SMAD6-203ENST00000558937 ANKRD39Q53RE8 183 aa8.42□□□□□ -1.06
SMAD6-203ENST00000558937 LINC00518Q8N0U6 118 aa8.42□□□□□ -1.06
SMAD6-203ENST00000558937 C20orf202A1L168 122 aa8.41□□□□□ -1.06
SMAD6-203ENST00000558937 C6orf99Q4VX62 202 aa8.41□□□□□ -1.06
SMAD6-203ENST00000558937 SCGB1D4Q6XE38 83 aa8.41□□□□□ -1.06
SMAD6-203ENST00000558937 SLC25A34Q6PIV7 304 aa8.4□□□□□ -1.06
SMAD6-203ENST00000558937 ATOH7Q8N100 152 aa8.39□□□□□ -1.07
SMAD6-203ENST00000558937 SEC61BP60468 96 aaKnown RBP8.38□□□□□ -1.07
SMAD6-203ENST00000558937 LAMTOR3Q9UHA4 124 aa8.38□□□□□ -1.07
SMAD6-203ENST00000558937 IFITM1P13164 125 aa8.36□□□□□ -1.07
SMAD6-203ENST00000558937 HRCT1Q6UXD1 115 aa8.36□□□□□ -1.07
SMAD6-203ENST00000558937 PCP2Q8IVA1 136 aa8.36□□□□□ -1.07
SMAD6-203ENST00000558937 COPS9Q8WXC6 57 aa8.36□□□□□ -1.07
SMAD6-203ENST00000558937 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
SMAD6-203ENST00000558937 TRBV7-6A0A0J9YX20 115 aa8.35□□□□□ -1.07
SMAD6-203ENST00000558937 TAL2Q16559 108 aa8.35□□□□□ -1.07
SMAD6-203ENST00000558937 Q1RN00 199 aa8.35□□□□□ -1.07
SMAD6-203ENST00000558937 XP32Q5T750 250 aa8.35□□□□□ -1.07
SMAD6-203ENST00000558937 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
SMAD6-203ENST00000558937 Q6ZVH6 145 aa8.34□□□□□ -1.07
SMAD6-203ENST00000558937 DEFB105AQ8NG35 78 aa8.34□□□□□ -1.07
SMAD6-203ENST00000558937 KRTAP9-2Q9BYQ4 174 aa8.34□□□□□ -1.07
SMAD6-203ENST00000558937 A0A1B0GWB2 263 aa8.33□□□□□ -1.08
SMAD6-203ENST00000558937 A6NDN8 102 aa8.33□□□□□ -1.08
SMAD6-203ENST00000558937 MUSTN1Q8IVN3 82 aa8.33□□□□□ -1.08
SMAD6-203ENST00000558937 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
SMAD6-203ENST00000558937 AKR1D1P51857 326 aa8.32□□□□□ -1.08
SMAD6-203ENST00000558937 LINC01547P58512 204 aaPredicted RBP8.3□□□□□ -1.08
SMAD6-203ENST00000558937 SMIM29Q86T20 159 aa8.3□□□□□ -1.08
SMAD6-203ENST00000558937 PRO1933Q9H354 126 aa8.3□□□□□ -1.08
SMAD6-203ENST00000558937 IGLV5-48A0A075B6I7 105 aa8.29□□□□□ -1.08
SMAD6-203ENST00000558937 CD164Q04900 197 aa8.29□□□□□ -1.08
SMAD6-203ENST00000558937 SNRPEP62304 92 aaKnown RBP8.28□□□□□ -1.08
SMAD6-203ENST00000558937 TRAV13-2A0A0B4J235 113 aa8.27□□□□□ -1.09
SMAD6-203ENST00000558937 H7C2G1 150 aa8.27□□□□□ -1.09
SMAD6-203ENST00000558937 HIST3H2BBQ8N257 126 aa8.27□□□□□ -1.09
SMAD6-203ENST00000558937 SMIM11BQ8TCY0 68 aa8.27□□□□□ -1.09
SMAD6-203ENST00000558937 A4D1N5 150 aa8.26□□□□□ -1.09
SMAD6-203ENST00000558937 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
SMAD6-203ENST00000558937 HIST1H2BLQ99880 126 aa8.25□□□□□ -1.09
SMAD6-203ENST00000558937 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
SMAD6-203ENST00000558937 A0A0G2JQZ4 141 aa8.24□□□□□ -1.09
SMAD6-203ENST00000558937 S100A2P29034 98 aa8.24□□□□□ -1.09
SMAD6-203ENST00000558937 Q5XG85 94 aa8.23□□□□□ -1.09
SMAD6-203ENST00000558937 HSBP1L1C9JCN9 74 aa8.21□□□□□ -1.1
SMAD6-203ENST00000558937 PCOTHQ58A44 107 aa8.21□□□□□ -1.1
SMAD6-203ENST00000558937 C1orf195Q5TG92 126 aa8.2□□□□□ -1.1
SMAD6-203ENST00000558937 VAMP3Q15836 100 aa8.18□□□□□ -1.1
SMAD6-203ENST00000558937 LINC00575Q6W349 94 aa8.18□□□□□ -1.1
SMAD6-203ENST00000558937 IGLV8-61A0A075B6I0 122 aa8.16□□□□□ -1.1
SMAD6-203ENST00000558937 F8WEM9 126 aa8.16□□□□□ -1.1
SMAD6-203ENST00000558937 S100A6P06703 90 aa8.16□□□□□ -1.1
SMAD6-203ENST00000558937 S100A1P23297 94 aa8.16□□□□□ -1.1
SMAD6-203ENST00000558937 Q6ZQY7 126 aa8.16□□□□□ -1.1
SMAD6-203ENST00000558937 hADV29S1A0JD25 119 aa8.15□□□□□ -1.1
SMAD6-203ENST00000558937 LCE2CQ5TA81 110 aa8.15□□□□□ -1.1
SMAD6-203ENST00000558937 KRTAP19-2Q3LHN2 52 aa8.14□□□□□ -1.11
SMAD6-203ENST00000558937 TCL1BO95988 128 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms