RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 TMEM238C9JI98 176 aa2.5□□□□□ -2.01
SPG11-211ENST00000558561 HSBP1O75506 76 aa2.5□□□□□ -2.01
SPG11-211ENST00000558561 ATP5LO75964 103 aa2.5□□□□□ -2.01
SPG11-211ENST00000558561 IGKV2D-28P01615 120 aa2.5□□□□□ -2.01
SPG11-211ENST00000558561 UBE2BP63146 152 aa2.5□□□□□ -2.01
SPG11-211ENST00000558561 SEC11AP67812 179 aa2.5□□□□□ -2.01
SPG11-211ENST00000558561 DAND5Q8N907 189 aa2.5□□□□□ -2.01
SPG11-211ENST00000558561 TTTY13Q9BZ97 58 aa2.5□□□□□ -2.01
SPG11-211ENST00000558561 ERG28Q9UKR5 140 aa2.5□□□□□ -2.01
SPG11-211ENST00000558561 TRAV12-1A0A0B4J245 112 aa2.49□□□□□ -2.01
SPG11-211ENST00000558561 LEPROTL1O95214 131 aa2.49□□□□□ -2.01
SPG11-211ENST00000558561 LINC00158P58513 81 aa2.49□□□□□ -2.01
SPG11-211ENST00000558561 MRPL55Q7Z7F7 128 aaKnown RBP2.49□□□□□ -2.01
SPG11-211ENST00000558561 UBR4Q5T4S7 5183 aa2.49□□□□□ -2.01
SPG11-211ENST00000558561 LRP2P98164 4655 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 IGLV1-50A0A075B6I6 118 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 IGKV2D-26A0A0A0MRZ7 120 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 H0Y9J4 135 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 H3BRM9 83 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 M0R378 163 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 ZNF861PO60384 105 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 NPC2P61916 151 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 PRLHP81277 87 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 KRTAP13-2Q52LG2 175 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 SOSTDC1Q6X4U4 206 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 KRTAP13-1Q8IUC0 172 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 MIR7-3HGQ8N6C7 128 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 PLEKHB2Q96CS7 222 aa2.48□□□□□ -2.01
SPG11-211ENST00000558561 LINC01549A6NIU2 74 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 NCR3O14931 201 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 LEPROTO15243 131 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 ERC2-IT1O76042 136 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 TSPAN13O95857 204 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 C3orf79P0CE67 100 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 CXCL5P42830 114 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 CXCL6P80162 114 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 ATOH7Q8N100 152 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 NDUFA12Q9UI09 145 aa2.47□□□□□ -2.01
SPG11-211ENST00000558561 A8MU10 97 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 SYS1-DBNDD2H3BUS1 97 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 J3QQQ9 107 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 BCE1O60756 84 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 DPM2O94777 84 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 IGKCP01834 107 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 FAM19A1Q7Z5A9 133 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 BOD1L2Q8IYS8 172 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 C3orf22Q8N5N4 141 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 DIRC1Q969H9 104 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 TMEM126AQ9H061 195 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 TP73-AS1Q9UF72 201 aa2.46□□□□□ -2.02
SPG11-211ENST00000558561 A0A0J9YXY3 114 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 TRBV10-3A0A0K0K1G6 114 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 KRTAP4-16G5E9R7 235 aaPredicted RBP2.45□□□□□ -2.02
SPG11-211ENST00000558561 MEIG1Q5JSS6 88 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 COA6Q5JTJ3 125 aaKnown RBP2.45□□□□□ -2.02
SPG11-211ENST00000558561 LINC01545Q5VT33 79 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 NKAPP1Q8N9T2 125 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 SMCR5Q8TEV8 140 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 MAP1LC3CQ9BXW4 147 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 PPDPFQ9H3Y8 114 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 HSPB8Q9UJY1 196 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 PKIGQ9Y2B9 76 aa2.45□□□□□ -2.02
SPG11-211ENST00000558561 MYMXA0A1B0GTQ4 84 aa2.44□□□□□ -2.02
SPG11-211ENST00000558561 E9PLD3 99 aa2.44□□□□□ -2.02
SPG11-211ENST00000558561 UBE2AP49459 152 aa2.44□□□□□ -2.02
SPG11-211ENST00000558561 KRTDAPP60985 99 aa2.44□□□□□ -2.02
SPG11-211ENST00000558561 COX17Q14061 63 aa2.44□□□□□ -2.02
SPG11-211ENST00000558561 PCP2Q8IVA1 136 aa2.44□□□□□ -2.02
SPG11-211ENST00000558561 RETNLBQ9BQ08 111 aa2.44□□□□□ -2.02
SPG11-211ENST00000558561 LOC107984156A0A0G2JMH3 177 aa2.43□□□□□ -2.02
SPG11-211ENST00000558561 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
SPG11-211ENST00000558561 SPRR1AP35321 89 aa2.43□□□□□ -2.02
SPG11-211ENST00000558561 RPL28P46779 137 aaKnown RBP2.43□□□□□ -2.02
SPG11-211ENST00000558561 ARL17AQ8IVW1 177 aa2.43□□□□□ -2.02
SPG11-211ENST00000558561 HIST3H2BBQ8N257 126 aa2.43□□□□□ -2.02
SPG11-211ENST00000558561 ST20-AS1Q8NBB2 130 aa2.43□□□□□ -2.02
SPG11-211ENST00000558561 Q9BRP9 147 aa2.43□□□□□ -2.02
SPG11-211ENST00000558561 HIGD2AQ9BW72 106 aa2.43□□□□□ -2.02
SPG11-211ENST00000558561 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
SPG11-211ENST00000558561 LGALS3P17931 250 aaKnown RBP2.42□□□□□ -2.02
SPG11-211ENST00000558561 PLNP26678 52 aa2.42□□□□□ -2.02
SPG11-211ENST00000558561 LINC00308Q8TCZ7 52 aa2.42□□□□□ -2.02
SPG11-211ENST00000558561 HIST1H2BLQ99880 126 aa2.42□□□□□ -2.02
SPG11-211ENST00000558561 KCNQ1DNQ9H478 68 aa2.42□□□□□ -2.02
SPG11-211ENST00000558561 A0A0G2JQZ4 141 aa2.41□□□□□ -2.02
SPG11-211ENST00000558561 ZNF815PA8K554 130 aa2.41□□□□□ -2.02
SPG11-211ENST00000558561 IGLV6-57P01721 117 aa2.41□□□□□ -2.02
SPG11-211ENST00000558561 CRYGAP11844 174 aa2.41□□□□□ -2.02
SPG11-211ENST00000558561 DDTP30046 118 aa2.41□□□□□ -2.02
SPG11-211ENST00000558561 PRR4Q16378 134 aa2.41□□□□□ -2.02
SPG11-211ENST00000558561 MUSTN1Q8IVN3 82 aa2.41□□□□□ -2.02
SPG11-211ENST00000558561 LINC00337Q8N6G1 96 aa2.41□□□□□ -2.02
SPG11-211ENST00000558561 SPRR4Q96PI1 79 aa2.41□□□□□ -2.02
SPG11-211ENST00000558561 S100A1P23297 94 aa2.4□□□□□ -2.03
SPG11-211ENST00000558561 NMUP48645 174 aa2.4□□□□□ -2.03
SPG11-211ENST00000558561 RNF213Q63HN8 5207 aa2.4□□□□□ -2.03
SPG11-211ENST00000558561 ETDCA0A1B0GVM5 59 aa2.39□□□□□ -2.03
SPG11-211ENST00000558561 NDUFC2O95298 119 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms