RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 LINC00158P58513 81 aa3.51□□□□□ -1.85
LRRC28-207ENST00000558500 PMVKQ15126 192 aa3.51□□□□□ -1.85
LRRC28-207ENST00000558500 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
LRRC28-207ENST00000558500 SFTA2Q6UW10 78 aa3.51□□□□□ -1.85
LRRC28-207ENST00000558500 HRCT1Q6UXD1 115 aa3.51□□□□□ -1.85
LRRC28-207ENST00000558500 C9JQL5 133 aa3.5□□□□□ -1.85
LRRC28-207ENST00000558500 MT2AP02795 61 aa3.5□□□□□ -1.85
LRRC28-207ENST00000558500 IGLC3P0DOY3 106 aa3.5□□□□□ -1.85
LRRC28-207ENST00000558500 ZNF22P17026 224 aaPredicted RBP3.5□□□□□ -1.85
LRRC28-207ENST00000558500 KIAA1644Q3SXP7 199 aa3.5□□□□□ -1.85
LRRC28-207ENST00000558500 BOD1L2Q8IYS8 172 aa3.5□□□□□ -1.85
LRRC28-207ENST00000558500 LINC01549A6NIU2 74 aa3.49□□□□□ -1.85
LRRC28-207ENST00000558500 S100A12P80511 92 aa3.49□□□□□ -1.85
LRRC28-207ENST00000558500 Q6ZRX8 168 aa3.49□□□□□ -1.85
LRRC28-207ENST00000558500 Q6ZVQ6 151 aa3.49□□□□□ -1.85
LRRC28-207ENST00000558500 TCTE3Q8IZS6 198 aa3.49□□□□□ -1.85
LRRC28-207ENST00000558500 IGKV2-30P06310 120 aa3.48□□□□□ -1.85
LRRC28-207ENST00000558500 FAM218AQ96MZ4 157 aa3.48□□□□□ -1.85
LRRC28-207ENST00000558500 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
LRRC28-207ENST00000558500 MT1FP04733 61 aa3.47□□□□□ -1.85
LRRC28-207ENST00000558500 SMIM13P0DJ93 91 aa3.47□□□□□ -1.85
LRRC28-207ENST00000558500 ST20-AS1Q8NBB2 130 aa3.47□□□□□ -1.85
LRRC28-207ENST00000558500 LINC01546A6NGU7 62 aa3.46□□□□□ -1.86
LRRC28-207ENST00000558500 DDTP30046 118 aa3.46□□□□□ -1.86
LRRC28-207ENST00000558500 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
LRRC28-207ENST00000558500 C1orf195Q5TG92 126 aa3.46□□□□□ -1.86
LRRC28-207ENST00000558500 SMIM29Q86T20 159 aa3.46□□□□□ -1.86
LRRC28-207ENST00000558500 MIR7-3HGQ8N6C7 128 aa3.46□□□□□ -1.86
LRRC28-207ENST00000558500 CHTOPQ9Y3Y2 248 aaKnown RBP3.46□□□□□ -1.86
LRRC28-207ENST00000558500 SPRR1BP22528 89 aa3.45□□□□□ -1.86
LRRC28-207ENST00000558500 NDUFA6P56556 154 aa3.45□□□□□ -1.86
LRRC28-207ENST00000558500 CD164Q04900 197 aa3.45□□□□□ -1.86
LRRC28-207ENST00000558500 JOSD1Q15040 202 aaPredicted RBP3.45□□□□□ -1.86
LRRC28-207ENST00000558500 PEA15Q15121 130 aa3.45□□□□□ -1.86
LRRC28-207ENST00000558500 Q5XG85 94 aa3.45□□□□□ -1.86
LRRC28-207ENST00000558500 FA2HQ7L5A8 372 aa3.45□□□□□ -1.86
LRRC28-207ENST00000558500 TRBV10-2A0A0K0K1G8 114 aa3.44□□□□□ -1.86
LRRC28-207ENST00000558500 C20orf202A1L168 122 aa3.44□□□□□ -1.86
LRRC28-207ENST00000558500 C11orf86A6NJI1 115 aa3.44□□□□□ -1.86
LRRC28-207ENST00000558500 H7C2G1 150 aa3.44□□□□□ -1.86
LRRC28-207ENST00000558500 MEIG1Q5JSS6 88 aa3.44□□□□□ -1.86
LRRC28-207ENST00000558500 TMEM170BQ5T4T1 132 aa3.44□□□□□ -1.86
LRRC28-207ENST00000558500 SLC25A34Q6PIV7 304 aa3.44□□□□□ -1.86
LRRC28-207ENST00000558500 KRTAP10-10P60014 251 aa3.43□□□□□ -1.86
LRRC28-207ENST00000558500 ATP11AUNQ6ZP68 121 aa3.43□□□□□ -1.86
LRRC28-207ENST00000558500 LINC00518Q8N0U6 118 aa3.43□□□□□ -1.86
LRRC28-207ENST00000558500 LOC107984156A0A0G2JMH3 177 aa3.42□□□□□ -1.86
LRRC28-207ENST00000558500 ARL17AQ8IVW1 177 aa3.42□□□□□ -1.86
LRRC28-207ENST00000558500 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
LRRC28-207ENST00000558500 LAMTOR3Q9UHA4 124 aa3.42□□□□□ -1.86
LRRC28-207ENST00000558500 TRAV23DV6A0A075B6W5 121 aa3.41□□□□□ -1.86
LRRC28-207ENST00000558500 A0A096LNJ9 63 aa3.41□□□□□ -1.86
LRRC28-207ENST00000558500 TMEM223A0PJW6 202 aa3.41□□□□□ -1.86
LRRC28-207ENST00000558500 ZNF73O43830 326 aaPredicted RBP3.41□□□□□ -1.86
LRRC28-207ENST00000558500 MT-ND4LP03901 98 aa3.41□□□□□ -1.86
LRRC28-207ENST00000558500 Q8N9P0 234 aaPredicted RBP3.41□□□□□ -1.86
LRRC28-207ENST00000558500 PRO1933Q9H354 126 aa3.41□□□□□ -1.86
LRRC28-207ENST00000558500 SPANXB1Q9NS25 103 aaPredicted RBP3.41□□□□□ -1.86
LRRC28-207ENST00000558500 LINC00587B1AMM8 73 aa3.4□□□□□ -1.87
LRRC28-207ENST00000558500 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
LRRC28-207ENST00000558500 BAGE3Q86Y29 109 aa3.4□□□□□ -1.87
LRRC28-207ENST00000558500 MAP1LC3CQ9BXW4 147 aa3.4□□□□□ -1.87
LRRC28-207ENST00000558500 SMCO4Q9NRQ5 59 aa3.4□□□□□ -1.87
LRRC28-207ENST00000558500 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
LRRC28-207ENST00000558500 Q1RN00 199 aa3.39□□□□□ -1.87
LRRC28-207ENST00000558500 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
LRRC28-207ENST00000558500 C10orf91Q5T1B1 145 aa3.39□□□□□ -1.87
LRRC28-207ENST00000558500 TRBV20-1A0A075B6N2 111 aa3.38□□□□□ -1.87
LRRC28-207ENST00000558500 NDUFC2O95298 119 aa3.38□□□□□ -1.87
LRRC28-207ENST00000558500 HBDP02042 147 aa3.38□□□□□ -1.87
LRRC28-207ENST00000558500 HINT1P49773 126 aaPredicted RBP3.38□□□□□ -1.87
LRRC28-207ENST00000558500 AKR1D1P51857 326 aa3.38□□□□□ -1.87
LRRC28-207ENST00000558500 DHRS4-AS1Q9P1J3 65 aa3.38□□□□□ -1.87
LRRC28-207ENST00000558500 A0A0G2JQZ4 141 aa3.37□□□□□ -1.87
LRRC28-207ENST00000558500 MYMXA0A1B0GTQ4 84 aa3.37□□□□□ -1.87
LRRC28-207ENST00000558500 TCL1BO95988 128 aa3.36□□□□□ -1.87
LRRC28-207ENST00000558500 PMCHL1Q16048 86 aa3.36□□□□□ -1.87
LRRC28-207ENST00000558500 TAL2Q16559 108 aa3.36□□□□□ -1.87
LRRC28-207ENST00000558500 OBSCN-AS1Q96MR7 158 aa3.36□□□□□ -1.87
LRRC28-207ENST00000558500 MIEN1Q9BRT3 115 aa3.36□□□□□ -1.87
LRRC28-207ENST00000558500 TEX49A0A1B0GTD5 131 aa3.35□□□□□ -1.87
LRRC28-207ENST00000558500 ADAMTSL4-AS1Q5T5F5 129 aa3.35□□□□□ -1.87
LRRC28-207ENST00000558500 COMMD7Q86VX2 200 aa3.35□□□□□ -1.87
LRRC28-207ENST00000558500 PCP2Q8IVA1 136 aa3.35□□□□□ -1.87
LRRC28-207ENST00000558500 DEFB105AQ8NG35 78 aa3.35□□□□□ -1.87
LRRC28-207ENST00000558500 C20orf166-AS1Q96NR2 134 aa3.35□□□□□ -1.87
LRRC28-207ENST00000558500 TRAV12-1A0A0B4J245 112 aa3.34□□□□□ -1.87
LRRC28-207ENST00000558500 LINC00614P0C842 121 aa3.34□□□□□ -1.87
LRRC28-207ENST00000558500 LGALS3P17931 250 aaKnown RBP3.34□□□□□ -1.87
LRRC28-207ENST00000558500 TSPEAR-AS2P59090 65 aa3.34□□□□□ -1.87
LRRC28-207ENST00000558500 C6orf99Q4VX62 202 aa3.34□□□□□ -1.87
LRRC28-207ENST00000558500 RPS10P5Q9NQ39 176 aa3.34□□□□□ -1.87
LRRC28-207ENST00000558500 CBY1Q9Y3M2 126 aa3.34□□□□□ -1.87
LRRC28-207ENST00000558500 IGKV2D-30A0A075B6S6 120 aa3.33□□□□□ -1.88
LRRC28-207ENST00000558500 FAM236DA0A1B0GTK5 79 aa3.33□□□□□ -1.88
LRRC28-207ENST00000558500 FAM236CP0DP71 79 aa3.33□□□□□ -1.88
LRRC28-207ENST00000558500 IFITM2Q01629 132 aa3.33□□□□□ -1.88
LRRC28-207ENST00000558500 FABP9Q0Z7S8 132 aa3.33□□□□□ -1.88
LRRC28-207ENST00000558500 SOSTDC1Q6X4U4 206 aa3.33□□□□□ -1.88
LRRC28-207ENST00000558500 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms