RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.38
LRRC28-204ENST00000558172 A6NDN8 102 aa6.4□□□□□ -1.38
LRRC28-204ENST00000558172 UBE2AP49459 152 aa6.4□□□□□ -1.38
LRRC28-204ENST00000558172 FAM19A1Q7Z5A9 133 aa6.4□□□□□ -1.38
LRRC28-204ENST00000558172 CEND1Q8N111 149 aa6.4□□□□□ -1.38
LRRC28-204ENST00000558172 TMEM238LA0A1B0GVL6 79 aa6.39□□□□□ -1.39
LRRC28-204ENST00000558172 ETDCA0A1B0GVM5 59 aa6.39□□□□□ -1.39
LRRC28-204ENST00000558172 A6NJY4 79 aa6.39□□□□□ -1.39
LRRC28-204ENST00000558172 H0Y9J4 135 aa6.39□□□□□ -1.39
LRRC28-204ENST00000558172 HINT1P49773 126 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-204ENST00000558172 HNRNPA3P51991 378 aaKnown RBP6.39□□□□□ -1.39
LRRC28-204ENST00000558172 HSD52Q0P140 79 aa6.39□□□□□ -1.39
LRRC28-204ENST00000558172 DIRC1Q969H9 104 aa6.39□□□□□ -1.39
LRRC28-204ENST00000558172 PRO1933Q9H354 126 aa6.39□□□□□ -1.39
LRRC28-204ENST00000558172 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-204ENST00000558172 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-204ENST00000558172 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-204ENST00000558172 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
LRRC28-204ENST00000558172 TSTD3H0UI37 97 aa6.37□□□□□ -1.39
LRRC28-204ENST00000558172 B5MCH6 92 aa6.36□□□□□ -1.39
LRRC28-204ENST00000558172 PRLHP81277 87 aa6.36□□□□□ -1.39
LRRC28-204ENST00000558172 RAB37Q96AX2 223 aa6.36□□□□□ -1.39
LRRC28-204ENST00000558172 A0A0B4J2C4 111 aa6.35□□□□□ -1.39
LRRC28-204ENST00000558172 CFC1BP0CG36 223 aa6.35□□□□□ -1.39
LRRC28-204ENST00000558172 CFC1P0CG37 223 aa6.35□□□□□ -1.39
LRRC28-204ENST00000558172 FAT3Q8TDW7 4589 aa6.34□□□□□ -1.39
LRRC28-204ENST00000558172 TRBV7-6A0A0J9YX20 115 aa6.34□□□□□ -1.39
LRRC28-204ENST00000558172 FXYD2P54710 66 aa6.34□□□□□ -1.39
LRRC28-204ENST00000558172 C6orf99Q4VX62 202 aa6.34□□□□□ -1.39
LRRC28-204ENST00000558172 Q6ZRX8 168 aa6.34□□□□□ -1.39
LRRC28-204ENST00000558172 OXTP01178 125 aa6.33□□□□□ -1.4
LRRC28-204ENST00000558172 RPL13AP40429 203 aaKnown RBP6.33□□□□□ -1.4
LRRC28-204ENST00000558172 SMIM11BQ8TCY0 68 aa6.33□□□□□ -1.4
LRRC28-204ENST00000558172 HIGD2AQ9BW72 106 aa6.33□□□□□ -1.4
LRRC28-204ENST00000558172 A0A1B0GWB2 263 aa6.32□□□□□ -1.4
LRRC28-204ENST00000558172 COX7BP24311 80 aa6.32□□□□□ -1.4
LRRC28-204ENST00000558172 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
LRRC28-204ENST00000558172 VAMP3Q15836 100 aa6.32□□□□□ -1.4
LRRC28-204ENST00000558172 PRO1854Q9UHT4 67 aa6.32□□□□□ -1.4
LRRC28-204ENST00000558172 LRP1Q07954 4544 aaKnown RBP6.31□□□□□ -1.4
LRRC28-204ENST00000558172 M0R143 59 aa6.31□□□□□ -1.4
LRRC28-204ENST00000558172 CTAG1AP78358 180 aa6.31□□□□□ -1.4
LRRC28-204ENST00000558172 BVES-AS1Q5T3Y7 98 aa6.31□□□□□ -1.4
LRRC28-204ENST00000558172 SMCR5Q8TEV8 140 aa6.31□□□□□ -1.4
LRRC28-204ENST00000558172 NHP2Q9NX24 153 aaKnown RBP6.31□□□□□ -1.4
LRRC28-204ENST00000558172 DHRS4-AS1Q9P1J3 65 aa6.31□□□□□ -1.4
LRRC28-204ENST00000558172 ZNF706Q9Y5V0 76 aaPredicted RBP6.31□□□□□ -1.4
LRRC28-204ENST00000558172 MYCBP2O75592 4640 aa6.3□□□□□ -1.4
LRRC28-204ENST00000558172 KRTAP29-1A8MX34 341 aaPredicted RBP6.3□□□□□ -1.4
LRRC28-204ENST00000558172 LINC01600Q96MT4 127 aa6.3□□□□□ -1.4
LRRC28-204ENST00000558172 PCLOQ9Y6V0 5065 aa6.3□□□□□ -1.4
LRRC28-204ENST00000558172 Q9BRP9 147 aa6.29□□□□□ -1.4
LRRC28-204ENST00000558172 H7C2G1 150 aa6.28□□□□□ -1.4
LRRC28-204ENST00000558172 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
LRRC28-204ENST00000558172 Q1RN00 199 aa6.28□□□□□ -1.4
LRRC28-204ENST00000558172 SLC25A20O43772 301 aa6.27□□□□□ -1.41
LRRC28-204ENST00000558172 FAM229BQ4G0N7 80 aa6.27□□□□□ -1.41
LRRC28-204ENST00000558172 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
LRRC28-204ENST00000558172 H0YGX0 51 aa6.26□□□□□ -1.41
LRRC28-204ENST00000558172 ERC2-IT1O76042 136 aa6.26□□□□□ -1.41
LRRC28-204ENST00000558172 J3QL48 77 aa6.25□□□□□ -1.41
LRRC28-204ENST00000558172 CRYGAP11844 174 aa6.25□□□□□ -1.41
LRRC28-204ENST00000558172 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-204ENST00000558172 K7ERJ3 54 aa6.24□□□□□ -1.41
LRRC28-204ENST00000558172 SNCGO76070 127 aa6.24□□□□□ -1.41
LRRC28-204ENST00000558172 COX6CP09669 75 aa6.24□□□□□ -1.41
LRRC28-204ENST00000558172 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
LRRC28-204ENST00000558172 LINC00575Q6W349 94 aa6.24□□□□□ -1.41
LRRC28-204ENST00000558172 TNXBP22105 4242 aa6.23□□□□□ -1.41
LRRC28-204ENST00000558172 hADV29S1A0JD25 119 aa6.23□□□□□ -1.41
LRRC28-204ENST00000558172 PSMB2P49721 201 aa6.23□□□□□ -1.41
LRRC28-204ENST00000558172 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
LRRC28-204ENST00000558172 GAGE2AQ6NT46 116 aa6.23□□□□□ -1.41
LRRC28-204ENST00000558172 A0A1B0GX51 115 aa6.22□□□□□ -1.41
LRRC28-204ENST00000558172 TSPAN13O95857 204 aa6.22□□□□□ -1.41
LRRC28-204ENST00000558172 PRR26Q8N8Z3 221 aa6.22□□□□□ -1.41
LRRC28-204ENST00000558172 ANAPC11Q9NYG5 84 aa6.22□□□□□ -1.41
LRRC28-204ENST00000558172 TRIAP1O43715 76 aa6.21□□□□□ -1.42
LRRC28-204ENST00000558172 MT1HL1P0DM35 61 aa6.21□□□□□ -1.42
LRRC28-204ENST00000558172 SPRR1BP22528 89 aa6.21□□□□□ -1.42
LRRC28-204ENST00000558172 ST20-AS1Q8NBB2 130 aa6.21□□□□□ -1.42
LRRC28-204ENST00000558172 A0A087X002 238 aa6.2□□□□□ -1.42
LRRC28-204ENST00000558172 TEX49A0A1B0GTD5 131 aa6.2□□□□□ -1.42
LRRC28-204ENST00000558172 BATFQ16520 125 aa6.2□□□□□ -1.42
LRRC28-204ENST00000558172 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-204ENST00000558172 TYMSOSQ8TAI1 123 aa6.2□□□□□ -1.42
LRRC28-204ENST00000558172 IGLV5-48A0A075B6I7 105 aa6.19□□□□□ -1.42
LRRC28-204ENST00000558172 GHRHP01286 108 aa6.18□□□□□ -1.42
LRRC28-204ENST00000558172 SCGB1C2P0DMR2 95 aa6.18□□□□□ -1.42
LRRC28-204ENST00000558172 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
LRRC28-204ENST00000558172 OCIAD2Q56VL3 154 aa6.18□□□□□ -1.42
LRRC28-204ENST00000558172 Q6ZQY7 126 aa6.18□□□□□ -1.42
LRRC28-204ENST00000558172 DEFB105AQ8NG35 78 aa6.18□□□□□ -1.42
LRRC28-204ENST00000558172 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
LRRC28-204ENST00000558172 LINC01547P58512 204 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-204ENST00000558172 PPDPFLQ8WWR9 84 aa6.17□□□□□ -1.42
LRRC28-204ENST00000558172 FAM218AQ96MZ4 157 aa6.17□□□□□ -1.42
LRRC28-204ENST00000558172 SSBP3-AS1Q7Z2R9 100 aa6.16□□□□□ -1.42
LRRC28-204ENST00000558172 Q8N377 158 aa6.16□□□□□ -1.42
LRRC28-204ENST00000558172 C3orf22Q8N5N4 141 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms