RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 LINC00337Q8N6G1 96 aa15.42■□□□□ 0.06
SMAD6-202ENST00000557916 LINC01600Q96MT4 127 aa15.42■□□□□ 0.06
SMAD6-202ENST00000557916 DMBT1Q9UGM3 2413 aaPredicted RBP15.41■□□□□ 0.06
SMAD6-202ENST00000557916 TRAV23DV6A0A075B6W5 121 aa15.4■□□□□ 0.06
SMAD6-202ENST00000557916 ETDCA0A1B0GVM5 59 aa15.4■□□□□ 0.06
SMAD6-202ENST00000557916 KRTAP4-16G5E9R7 235 aaPredicted RBP15.39■□□□□ 0.05
SMAD6-202ENST00000557916 HIST1H4GQ99525 98 aa15.38■□□□□ 0.05
SMAD6-202ENST00000557916 CBY1Q9Y3M2 126 aa15.38■□□□□ 0.05
SMAD6-202ENST00000557916 HIGD1BQ9P298 99 aa15.35■□□□□ 0.05
SMAD6-202ENST00000557916 ZNF73O43830 326 aaPredicted RBP15.34■□□□□ 0.05
SMAD6-202ENST00000557916 KRTAP1-4P0C5Y4 121 aa15.34■□□□□ 0.05
SMAD6-202ENST00000557916 HIGD2AQ9BW72 106 aa15.34■□□□□ 0.05
SMAD6-202ENST00000557916 B5MCH6 92 aa15.34■□□□□ 0.05
SMAD6-202ENST00000557916 MT1HL1P0DM35 61 aa15.34■□□□□ 0.05
SMAD6-202ENST00000557916 A6NDN8 102 aa15.33■□□□□ 0.04
SMAD6-202ENST00000557916 C2orf91Q6ZV80 131 aa15.33■□□□□ 0.04
SMAD6-202ENST00000557916 A4D1N5 150 aa15.32■□□□□ 0.04
SMAD6-202ENST00000557916 TRAV13-2A0A0B4J235 113 aa15.3■□□□□ 0.04
SMAD6-202ENST00000557916 Q6ZRX8 168 aa15.28■□□□□ 0.04
SMAD6-202ENST00000557916 HINT1P49773 126 aaPredicted RBP15.27■□□□□ 0.04
SMAD6-202ENST00000557916 KRTAP10-8P60410 259 aa15.27■□□□□ 0.04
SMAD6-202ENST00000557916 PRR26Q8N8Z3 221 aa15.26■□□□□ 0.03
SMAD6-202ENST00000557916 SMCR5Q8TEV8 140 aa15.26■□□□□ 0.03
SMAD6-202ENST00000557916 HERC1Q15751 4861 aa15.26■□□□□ 0.03
SMAD6-202ENST00000557916 TNXBP22105 4242 aa15.24■□□□□ 0.03
SMAD6-202ENST00000557916 C6orf99Q4VX62 202 aa15.23■□□□□ 0.03
SMAD6-202ENST00000557916 Q9BRP9 147 aa15.23■□□□□ 0.03
SMAD6-202ENST00000557916 ANAPC11Q9NYG5 84 aa15.23■□□□□ 0.03
SMAD6-202ENST00000557916 TAL2Q16559 108 aa15.22■□□□□ 0.03
SMAD6-202ENST00000557916 C12orf57Q99622 126 aa15.22■□□□□ 0.03
SMAD6-202ENST00000557916 UQCR10Q9UDW1 63 aa15.21■□□□□ 0.03
SMAD6-202ENST00000557916 SMIM6P0DI80 62 aa15.19■□□□□ 0.02
SMAD6-202ENST00000557916 SPRR4Q96PI1 79 aa15.19■□□□□ 0.02
SMAD6-202ENST00000557916 ZNF706Q9Y5V0 76 aaPredicted RBP15.19■□□□□ 0.02
SMAD6-202ENST00000557916 ERC2-IT1O76042 136 aa15.18■□□□□ 0.02
SMAD6-202ENST00000557916 COX7BP24311 80 aa15.18■□□□□ 0.02
SMAD6-202ENST00000557916 RPL13AP40429 203 aaKnown RBP15.18■□□□□ 0.02
SMAD6-202ENST00000557916 CEND1Q8N111 149 aa15.18■□□□□ 0.02
SMAD6-202ENST00000557916 LOC105371267A0A1B0GV96 52 aa15.17■□□□□ 0.02
SMAD6-202ENST00000557916 CRYGAP11844 174 aa15.17■□□□□ 0.02
SMAD6-202ENST00000557916 SMIM11BQ8TCY0 68 aa15.17■□□□□ 0.02
SMAD6-202ENST00000557916 TRBV7-6A0A0J9YX20 115 aa15.17■□□□□ 0.02
SMAD6-202ENST00000557916 ELOF1P60002 83 aaKnown RBP15.17■□□□□ 0.02
SMAD6-202ENST00000557916 FAM229BQ4G0N7 80 aa15.17■□□□□ 0.02
SMAD6-202ENST00000557916 A0A087X002 238 aa15.16■□□□□ 0.02
SMAD6-202ENST00000557916 CFC1BP0CG36 223 aa15.14■□□□□ 0.01
SMAD6-202ENST00000557916 CFC1P0CG37 223 aa15.14■□□□□ 0.01
SMAD6-202ENST00000557916 DHRS4-AS1Q9P1J3 65 aa15.14■□□□□ 0.01
SMAD6-202ENST00000557916 A0A1B0GWB2 263 aa15.12■□□□□ 0.01
SMAD6-202ENST00000557916 HSD52Q0P140 79 aa15.12■□□□□ 0.01
SMAD6-202ENST00000557916 RAB37Q96AX2 223 aa15.12■□□□□ 0.01
SMAD6-202ENST00000557916 TMEM238LA0A1B0GVL6 79 aa15.11■□□□□ 0.01
SMAD6-202ENST00000557916 A6NJY4 79 aa15.11■□□□□ 0.01
SMAD6-202ENST00000557916 PRO1933Q9H354 126 aa15.11■□□□□ 0.01
SMAD6-202ENST00000557916 FXYD2P54710 66 aa15.1■□□□□ 0.01
SMAD6-202ENST00000557916 A0A0B4J2C4 111 aa15.09■□□□□ 0.01
SMAD6-202ENST00000557916 GAGE2AQ6NT46 116 aa15.09■□□□□ 0.01
SMAD6-202ENST00000557916 KRTAP13-2Q52LG2 175 aa15.09■□□□□ 0.01
SMAD6-202ENST00000557916 TYMSOSQ8TAI1 123 aa15.08■□□□□ 0
SMAD6-202ENST00000557916 VAMP3Q15836 100 aa15.07■□□□□ 0
SMAD6-202ENST00000557916 LINC00483Q53H64 154 aa15.06■□□□□ 0
SMAD6-202ENST00000557916 ST20-AS1Q8NBB2 130 aa15.06■□□□□ 0
SMAD6-202ENST00000557916 H7C2G1 150 aa15.05■□□□□ -0
SMAD6-202ENST00000557916 C3orf22Q8N5N4 141 aa15.01□□□□□ -0.01
SMAD6-202ENST00000557916 PRO1854Q9UHT4 67 aa15.01□□□□□ -0.01
SMAD6-202ENST00000557916 NHP2Q9NX24 153 aaKnown RBP15□□□□□ -0.01
SMAD6-202ENST00000557916 BVES-AS1Q5T3Y7 98 aa14.98□□□□□ -0.01
SMAD6-202ENST00000557916 Q1RN00 199 aa14.97□□□□□ -0.01
SMAD6-202ENST00000557916 SLC25A20O43772 301 aa14.96□□□□□ -0.01
SMAD6-202ENST00000557916 LINC00575Q6W349 94 aa14.96□□□□□ -0.01
SMAD6-202ENST00000557916 SPRR1BP22528 89 aa14.93□□□□□ -0.02
SMAD6-202ENST00000557916 DEFB105AQ8NG35 78 aa14.93□□□□□ -0.02
SMAD6-202ENST00000557916 TSTD3H0UI37 97 aa14.92□□□□□ -0.02
SMAD6-202ENST00000557916 K7ERJ3 54 aa14.92□□□□□ -0.02
SMAD6-202ENST00000557916 CTAG1AP78358 180 aa14.92□□□□□ -0.02
SMAD6-202ENST00000557916 IGLV9-49A0A0B4J1Y8 123 aa14.92□□□□□ -0.02
SMAD6-202ENST00000557916 hADV29S1A0JD25 119 aa14.91□□□□□ -0.02
SMAD6-202ENST00000557916 LINC00304Q8N9R0 145 aa14.91□□□□□ -0.02
SMAD6-202ENST00000557916 TEX49A0A1B0GTD5 131 aa14.89□□□□□ -0.03
SMAD6-202ENST00000557916 MOBPQ13875 183 aa14.88□□□□□ -0.03
SMAD6-202ENST00000557916 IGLV5-48A0A075B6I7 105 aa14.87□□□□□ -0.03
SMAD6-202ENST00000557916 H0YGX0 51 aa14.87□□□□□ -0.03
SMAD6-202ENST00000557916 LINC01547P58512 204 aaPredicted RBP14.87□□□□□ -0.03
SMAD6-202ENST00000557916 HMCN2Q8NDA2 5059 aa14.86□□□□□ -0.03
SMAD6-202ENST00000557916 TSPAN13O95857 204 aa14.86□□□□□ -0.03
SMAD6-202ENST00000557916 Q8NBF4 154 aa14.85□□□□□ -0.03
SMAD6-202ENST00000557916 LAMTOR3Q9UHA4 124 aa14.85□□□□□ -0.03
SMAD6-202ENST00000557916 C9orf153Q5TBE3 101 aa14.84□□□□□ -0.03
SMAD6-202ENST00000557916 SSBP3-AS1Q7Z2R9 100 aa14.84□□□□□ -0.03
SMAD6-202ENST00000557916 M0R143 59 aa14.83□□□□□ -0.03
SMAD6-202ENST00000557916 Q6ZQY7 126 aa14.83□□□□□ -0.03
SMAD6-202ENST00000557916 TRIAP1O43715 76 aa14.83□□□□□ -0.04
SMAD6-202ENST00000557916 Q8N377 158 aa14.81□□□□□ -0.04
SMAD6-202ENST00000557916 SNCGO76070 127 aa14.8□□□□□ -0.04
SMAD6-202ENST00000557916 PSMB2P49721 201 aa14.8□□□□□ -0.04
SMAD6-202ENST00000557916 C4orf48Q5BLP8 95 aa14.8□□□□□ -0.04
SMAD6-202ENST00000557916 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.8□□□□□ -0.04
SMAD6-202ENST00000557916 SPAG11AQ6PDA7 123 aa14.79□□□□□ -0.04
SMAD6-202ENST00000557916 SMIM29Q86T20 159 aa14.79□□□□□ -0.04
SMAD6-202ENST00000557916 FAM218AQ96MZ4 157 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms