RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 NOTCH2Q04721 2471 aa7.74□□□□□ -1.17
VIPAS39-211ENST00000557658 Q8N377 158 aa7.73□□□□□ -1.17
VIPAS39-211ENST00000557658 IGLV5-48A0A075B6I7 105 aa7.73□□□□□ -1.17
VIPAS39-211ENST00000557658 IGKV2D-24A0A075B6R9 120 aa7.73□□□□□ -1.17
VIPAS39-211ENST00000557658 A0A0U1RQV1 116 aa7.72□□□□□ -1.17
VIPAS39-211ENST00000557658 PRYO14603 147 aa7.72□□□□□ -1.17
VIPAS39-211ENST00000557658 C7orf33Q8WU49 177 aa7.72□□□□□ -1.17
VIPAS39-211ENST00000557658 HIVEP1P15822 2718 aa7.72□□□□□ -1.17
VIPAS39-211ENST00000557658 FUSP35637 526 aaKnown RBP eCLIP7.72□□□□□ -1.17
VIPAS39-211ENST00000557658 ESRGQ1W209 222 aa7.72□□□□□ -1.17
VIPAS39-211ENST00000557658 A0A1B0GW54 56 aa7.71□□□□□ -1.17
VIPAS39-211ENST00000557658 SERTAD4-AS1Q5TG53 156 aa7.71□□□□□ -1.18
VIPAS39-211ENST00000557658 Q6ZTC4 211 aa7.71□□□□□ -1.18
VIPAS39-211ENST00000557658 DHRS4-AS1Q9P1J3 65 aa7.71□□□□□ -1.18
VIPAS39-211ENST00000557658 LINC01556Q5JQF7 62 aa7.7□□□□□ -1.18
VIPAS39-211ENST00000557658 LINC00336Q6ZUF6 198 aa7.7□□□□□ -1.18
VIPAS39-211ENST00000557658 PRO0628Q9UI54 55 aa7.7□□□□□ -1.18
VIPAS39-211ENST00000557658 RETNQ9HD89 108 aa7.69□□□□□ -1.18
VIPAS39-211ENST00000557658 LINC00474Q9P2X8 69 aa7.69□□□□□ -1.18
VIPAS39-211ENST00000557658 UNC79Q9P2D8 2635 aa7.69□□□□□ -1.18
VIPAS39-211ENST00000557658 INAFM1C9JVW0 142 aa7.69□□□□□ -1.18
VIPAS39-211ENST00000557658 FASNP49327 2511 aaKnown RBP7.68□□□□□ -1.18
VIPAS39-211ENST00000557658 TENM1Q9UKZ4 2725 aa7.68□□□□□ -1.18
VIPAS39-211ENST00000557658 Q6ZRX8 168 aa7.68□□□□□ -1.18
VIPAS39-211ENST00000557658 PLA2G2DQ9UNK4 145 aa7.67□□□□□ -1.18
VIPAS39-211ENST00000557658 A0A1W2PNM2 257 aa7.67□□□□□ -1.18
VIPAS39-211ENST00000557658 HIGD2AQ9BW72 106 aa7.67□□□□□ -1.18
VIPAS39-211ENST00000557658 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
VIPAS39-211ENST00000557658 TLX1NBP0CAT3 122 aa7.66□□□□□ -1.18
VIPAS39-211ENST00000557658 C1orf137Q5JT78 98 aa7.66□□□□□ -1.18
VIPAS39-211ENST00000557658 J3QKU1 62 aa7.66□□□□□ -1.18
VIPAS39-211ENST00000557658 SMIM29Q86T20 159 aa7.66□□□□□ -1.18
VIPAS39-211ENST00000557658 RPL37AP8A6NKH3 93 aa7.65□□□□□ -1.18
VIPAS39-211ENST00000557658 Q9BRP9 147 aa7.65□□□□□ -1.18
VIPAS39-211ENST00000557658 TNP2Q05952 138 aa7.65□□□□□ -1.18
VIPAS39-211ENST00000557658 Q8NBF4 154 aa7.65□□□□□ -1.18
VIPAS39-211ENST00000557658 ATRQ13535 2644 aa7.65□□□□□ -1.19
VIPAS39-211ENST00000557658 KRTAP4-16G5E9R7 235 aaPredicted RBP7.65□□□□□ -1.19
VIPAS39-211ENST00000557658 FAM30AQ9NZY2 134 aa7.65□□□□□ -1.19
VIPAS39-211ENST00000557658 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
VIPAS39-211ENST00000557658 IGLV5-37A0A075B6J1 123 aa7.64□□□□□ -1.19
VIPAS39-211ENST00000557658 SPRR1AP35321 89 aa7.64□□□□□ -1.19
VIPAS39-211ENST00000557658 TEP1Q99973 2627 aaKnown RBP7.63□□□□□ -1.19
VIPAS39-211ENST00000557658 DEFB131BA0A096LNP1 70 aa7.63□□□□□ -1.19
VIPAS39-211ENST00000557658 FAM229BQ4G0N7 80 aa7.63□□□□□ -1.19
VIPAS39-211ENST00000557658 ST20-AS1Q8NBB2 130 aa7.63□□□□□ -1.19
VIPAS39-211ENST00000557658 SPRR4Q96PI1 79 aa7.63□□□□□ -1.19
VIPAS39-211ENST00000557658 FAM168BA1KXE4 195 aa7.62□□□□□ -1.19
VIPAS39-211ENST00000557658 DNAH10OSP0CZ25 163 aa7.62□□□□□ -1.19
VIPAS39-211ENST00000557658 HELZ2Q9BYK8 2649 aaKnown RBP7.62□□□□□ -1.19
VIPAS39-211ENST00000557658 LCE6AA0A183 80 aa7.62□□□□□ -1.19
VIPAS39-211ENST00000557658 NSD1Q96L73 2696 aaPredicted RBP7.61□□□□□ -1.19
VIPAS39-211ENST00000557658 TRRAPQ9Y4A5 3859 aa7.61□□□□□ -1.19
VIPAS39-211ENST00000557658 MPLKIPQ8TAP9 179 aa7.61□□□□□ -1.19
VIPAS39-211ENST00000557658 OXLD1Q5BKU9 147 aa7.6□□□□□ -1.19
VIPAS39-211ENST00000557658 DSCR10P59022 87 aa7.6□□□□□ -1.19
VIPAS39-211ENST00000557658 C11orf45Q8TAV5 145 aa7.6□□□□□ -1.19
VIPAS39-211ENST00000557658 KRTAP10-11P60412 298 aa7.59□□□□□ -1.19
VIPAS39-211ENST00000557658 PKD1L1Q8TDX9 2849 aa7.59□□□□□ -1.19
VIPAS39-211ENST00000557658 UBE2BP63146 152 aa7.59□□□□□ -1.2
VIPAS39-211ENST00000557658 K7EQZ3 153 aa7.58□□□□□ -1.2
VIPAS39-211ENST00000557658 MRPL55Q7Z7F7 128 aaKnown RBP7.58□□□□□ -1.2
VIPAS39-211ENST00000557658 BRK1Q8WUW1 75 aa7.58□□□□□ -1.2
VIPAS39-211ENST00000557658 KRTAP7-1Q8IUC3 87 aa7.57□□□□□ -1.2
VIPAS39-211ENST00000557658 ZCCHC13Q8WW36 166 aaKnown RBP7.56□□□□□ -1.2
VIPAS39-211ENST00000557658 hDV103S1A0JD37 113 aa7.55□□□□□ -1.2
VIPAS39-211ENST00000557658 CASC10Q5T4H9 136 aa7.55□□□□□ -1.2
VIPAS39-211ENST00000557658 REG3GQ6UW15 175 aa7.55□□□□□ -1.2
VIPAS39-211ENST00000557658 HCG22E2RYF7 251 aa7.54□□□□□ -1.2
VIPAS39-211ENST00000557658 LINC00476Q8WZB0 136 aa7.54□□□□□ -1.2
VIPAS39-211ENST00000557658 OTOGQ6ZRI0 2925 aa7.54□□□□□ -1.2
VIPAS39-211ENST00000557658 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.53□□□□□ -1.2
VIPAS39-211ENST00000557658 LINC00588Q9Y4M8 146 aa7.53□□□□□ -1.2
VIPAS39-211ENST00000557658 TENM3Q9P273 2699 aa7.52□□□□□ -1.2
VIPAS39-211ENST00000557658 KMT2BQ9UMN6 2715 aaPredicted RBP7.52□□□□□ -1.21
VIPAS39-211ENST00000557658 PSCAO43653 123 aa7.52□□□□□ -1.21
VIPAS39-211ENST00000557658 PKIGQ9Y2B9 76 aa7.52□□□□□ -1.21
VIPAS39-211ENST00000557658 C1orf64Q8NEQ6 169 aa7.51□□□□□ -1.21
VIPAS39-211ENST00000557658 IGFL1Q6UW32 110 aa7.5□□□□□ -1.21
VIPAS39-211ENST00000557658 HECTD1Q9ULT8 2610 aa7.5□□□□□ -1.21
VIPAS39-211ENST00000557658 CYP4F30PQ9H0H9 118 aa7.48□□□□□ -1.21
VIPAS39-211ENST00000557658 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
VIPAS39-211ENST00000557658 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
VIPAS39-211ENST00000557658 NDUFB1O75438 58 aa7.48□□□□□ -1.21
VIPAS39-211ENST00000557658 Q1T7F1 81 aa7.48□□□□□ -1.21
VIPAS39-211ENST00000557658 LRCOL1A6NCL2 159 aa7.47□□□□□ -1.21
VIPAS39-211ENST00000557658 MP68P56378 58 aa7.47□□□□□ -1.21
VIPAS39-211ENST00000557658 IGLV8-61A0A075B6I0 122 aa7.46□□□□□ -1.21
VIPAS39-211ENST00000557658 A0A087WSZ3 146 aa7.46□□□□□ -1.21
VIPAS39-211ENST00000557658 DEFB116Q30KQ4 102 aa7.46□□□□□ -1.21
VIPAS39-211ENST00000557658 WFDC13Q8IUB5 93 aa7.46□□□□□ -1.21
VIPAS39-211ENST00000557658 DNAH1Q9P2D7 4330 aa7.46□□□□□ -1.22
VIPAS39-211ENST00000557658 PRLHP81277 87 aa7.45□□□□□ -1.22
VIPAS39-211ENST00000557658 F8P00451 2351 aa7.44□□□□□ -1.22
VIPAS39-211ENST00000557658 ANK2Q01484 3957 aa7.44□□□□□ -1.22
VIPAS39-211ENST00000557658 PRR4Q16378 134 aa7.44□□□□□ -1.22
VIPAS39-211ENST00000557658 C1orf195Q5TG92 126 aa7.43□□□□□ -1.22
VIPAS39-211ENST00000557658 A0A096LNI7 61 aa7.42□□□□□ -1.22
VIPAS39-211ENST00000557658 C16orf90A8MZG2 172 aa7.42□□□□□ -1.22
VIPAS39-211ENST00000557658 UBE2AP49459 152 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms