RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 WFDC9Q8NEX5 89 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 TMEM263Q8WUH6 116 aaKnown RBP2.47□□□□□ -2.01
PRPF39-212ENST00000557477 TENM3Q9P273 2699 aa2.47□□□□□ -2.01
PRPF39-212ENST00000557477 TRBV10-3A0A0K0K1G6 114 aa2.46□□□□□ -2.02
PRPF39-212ENST00000557477 A0A1B0GUT8 65 aa2.46□□□□□ -2.02
PRPF39-212ENST00000557477 A6NN06 94 aa2.46□□□□□ -2.02
PRPF39-212ENST00000557477 F8VRH5 84 aa2.46□□□□□ -2.02
PRPF39-212ENST00000557477 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
PRPF39-212ENST00000557477 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
PRPF39-212ENST00000557477 PRR9Q5T870 116 aa2.46□□□□□ -2.02
PRPF39-212ENST00000557477 PRNTQ86SH4 94 aa2.46□□□□□ -2.02
PRPF39-212ENST00000557477 ICOSQ9Y6W8 199 aa2.46□□□□□ -2.02
PRPF39-212ENST00000557477 CMYA5Q8N3K9 4069 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 IGKV3D-7A0A0C4DH55 119 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 A0A0J9YY99 117 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 DNAL4O96015 105 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 MIFP14174 115 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 RNASE4P34096 147 aaKnown RBP2.45□□□□□ -2.02
PRPF39-212ENST00000557477 FAM229BQ4G0N7 80 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 MINOS1Q5TGZ0 78 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 HCP5Q6MZN7 132 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 LINC00269Q8N2A0 174 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 CLEC2BQ92478 149 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 PHLDA3Q9Y5J5 127 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 MINOS1-NBL1R4GNA1 71 aa2.45□□□□□ -2.02
PRPF39-212ENST00000557477 A0A087WVE0 104 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 ODF3BA8MYP8 253 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 D6R8Y8 96 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 SH2D1AO60880 128 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 ERC2-IT1O76042 136 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 DEFA4P12838 97 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 SPANXN1Q5VSR9 72 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 SPINT4Q6UDR6 99 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 LYPD1Q8N2G4 141 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 Q8N6K4 173 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 TMEM141Q96I45 108 aa2.44□□□□□ -2.02
PRPF39-212ENST00000557477 ZNF706Q9Y5V0 76 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-212ENST00000557477 H7C2G1 150 aa2.43□□□□□ -2.02
PRPF39-212ENST00000557477 COX7A2P2O60397 106 aa2.43□□□□□ -2.02
PRPF39-212ENST00000557477 NDUFA3O95167 84 aa2.43□□□□□ -2.02
PRPF39-212ENST00000557477 IGKV1-17P01599 117 aa2.43□□□□□ -2.02
PRPF39-212ENST00000557477 PRM2P04554 102 aa2.43□□□□□ -2.02
PRPF39-212ENST00000557477 SAA1P0DJI8 122 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-212ENST00000557477 C4orf3Q8WVX3 66 aa2.43□□□□□ -2.02
PRPF39-212ENST00000557477 NDUFA12Q9UI09 145 aa2.43□□□□□ -2.02
PRPF39-212ENST00000557477 TENM2Q9NT68 2774 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 TRAV23DV6A0A075B6W5 121 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 C17orf98A8MV24 154 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 IGKV1-16P04430 117 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 RPL28P46779 137 aaKnown RBP2.42□□□□□ -2.02
PRPF39-212ENST00000557477 PATE2Q6UY27 113 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 MIR17HGQ75NE6 70 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 C5orf56Q8N8D9 126 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 LEAP2Q969E1 77 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 CYP4F30PQ9H0H9 118 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 COL7A1Q02388 2944 aa2.42□□□□□ -2.02
PRPF39-212ENST00000557477 TRAV22A0A0B4J277 110 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 TRBV6-1A0A0K0K1D8 114 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 hDV103S1A0JD37 113 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 NUPR2A6NF83 97 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 HCG22E2RYF7 251 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 GNRH2O43555 120 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 ARMS2P0C7Q2 107 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 FXYD7P58549 80 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 ASB16-AS1Q495Z4 193 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 SCXQ7RTU7 201 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 Q8IYB0 196 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 SPTSSBQ8NFR3 76 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 FAM167A-AS1Q96KT0 104 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 SNURFQ9Y675 71 aa2.41□□□□□ -2.02
PRPF39-212ENST00000557477 BIRC6Q9NR09 4857 aa2.4□□□□□ -2.03
PRPF39-212ENST00000557477 A0A0J9YX75 114 aa2.4□□□□□ -2.03
PRPF39-212ENST00000557477 TRBV7-4A0A0J9YYF1 115 aa2.4□□□□□ -2.03
PRPF39-212ENST00000557477 SDHAF1A6NFY7 115 aa2.4□□□□□ -2.03
PRPF39-212ENST00000557477 C11orf86A6NJI1 115 aa2.4□□□□□ -2.03
PRPF39-212ENST00000557477 M0R3E3 92 aa2.4□□□□□ -2.03
PRPF39-212ENST00000557477 BAALC-AS2P0C853 105 aa2.4□□□□□ -2.03
PRPF39-212ENST00000557477 MUSTN1Q8IVN3 82 aa2.4□□□□□ -2.03
PRPF39-212ENST00000557477 EPPK1P58107 5090 aaKnown RBP2.4□□□□□ -2.03
PRPF39-212ENST00000557477 IGHV3-43A0A0B4J1X8 118 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 G3V318 75 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 I3L3M4 83 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 Q5VV11 94 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-212ENST00000557477 TMEM254Q8TBM7 123 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 SCGB3A1Q96QR1 104 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 CDC42SE1Q9NRR8 79 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 LINC00846Q9NV44 126 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 STAB2Q8WWQ8 2551 aa2.39□□□□□ -2.03
PRPF39-212ENST00000557477 IGIPA6NJ69 53 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 CHKB-CPT1BH3BT56 60 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 LEPROTO15243 131 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 TRGV3P03979 118 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 IGLV7-43P04211 117 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 C9orf116Q5BN46 136 aaPredicted RBP2.38□□□□□ -2.03
PRPF39-212ENST00000557477 LINC00322Q6ZN03 302 aaPredicted RBP2.38□□□□□ -2.03
PRPF39-212ENST00000557477 Q86TA4 180 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 C1orf64Q8NEQ6 169 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 LIMD2Q9BT23 127 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms