RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 FAM210AQ96ND0 272 aa1.77□□□□□ -2.13
CHD8-212ENST00000557329 LIMD2Q9BT23 127 aa1.77□□□□□ -2.13
CHD8-212ENST00000557329 TIMM21Q9BVV7 248 aa1.77□□□□□ -2.13
CHD8-212ENST00000557329 EIF5A2Q9GZV4 153 aaKnown RBP1.77□□□□□ -2.13
CHD8-212ENST00000557329 VCX2Q9H322 139 aa1.77□□□□□ -2.13
CHD8-212ENST00000557329 GEMIN7Q9H840 131 aaKnown RBP1.77□□□□□ -2.13
CHD8-212ENST00000557329 SPANXA1Q9NS26 97 aa1.77□□□□□ -2.13
CHD8-212ENST00000557329 CHTOPQ9Y3Y2 248 aaKnown RBP1.77□□□□□ -2.13
CHD8-212ENST00000557329 KMT2DO14686 5537 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 FXYD6-FXYD2A0A087WZ82 144 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 A8MUU9 505 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 PPP1R2P9O14990 202 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 PPP1R17O96001 155 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 CKS2P33552 79 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 CEBPGP53567 150 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 RPS29P62273 56 aaKnown RBP1.76□□□□□ -2.13
CHD8-212ENST00000557329 SPINT4Q6UDR6 99 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 TMEM141Q96I45 108 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 C20orf166-AS1Q96NR2 134 aa1.76□□□□□ -2.13
CHD8-212ENST00000557329 CCL20P78556 96 aa1.75□□□□□ -2.13
CHD8-212ENST00000557329 S100A12P80511 92 aa1.75□□□□□ -2.13
CHD8-212ENST00000557329 MRPS36P82909 103 aaKnown RBP1.75□□□□□ -2.13
CHD8-212ENST00000557329 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
CHD8-212ENST00000557329 COX7B2Q8TF08 81 aa1.75□□□□□ -2.13
CHD8-212ENST00000557329 ZNF625Q96I27 306 aaPredicted RBP1.75□□□□□ -2.13
CHD8-212ENST00000557329 CDKN2A-AS1Q9UH64 79 aa1.75□□□□□ -2.13
CHD8-212ENST00000557329 A0A1B0GUT8 65 aa1.74□□□□□ -2.13
CHD8-212ENST00000557329 NCR3O14931 201 aa1.74□□□□□ -2.13
CHD8-212ENST00000557329 SPINK8P0C7L1 97 aa1.74□□□□□ -2.13
CHD8-212ENST00000557329 HERVK_113P63121 156 aa1.74□□□□□ -2.13
CHD8-212ENST00000557329 MIR7-3HGQ8N6C7 128 aa1.74□□□□□ -2.13
CHD8-212ENST00000557329 ST20-AS1Q8NBB2 130 aa1.74□□□□□ -2.13
CHD8-212ENST00000557329 SND1-IT1Q9HBX3 110 aa1.74□□□□□ -2.13
CHD8-212ENST00000557329 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
CHD8-212ENST00000557329 HIGD1CA8MV81 97 aa1.73□□□□□ -2.13
CHD8-212ENST00000557329 TEX46H3BTG2 121 aa1.73□□□□□ -2.13
CHD8-212ENST00000557329 K7EN84 100 aa1.73□□□□□ -2.13
CHD8-212ENST00000557329 ERC2-IT1O76042 136 aa1.73□□□□□ -2.13
CHD8-212ENST00000557329 LINC00158P58513 81 aa1.73□□□□□ -2.13
CHD8-212ENST00000557329 MRPL51Q4U2R6 128 aaKnown RBP1.73□□□□□ -2.13
CHD8-212ENST00000557329 CNFNQ9BYD5 112 aa1.73□□□□□ -2.13
CHD8-212ENST00000557329 MANBALQ9NQG1 85 aa1.73□□□□□ -2.13
CHD8-212ENST00000557329 BATF3Q9NR55 127 aa1.73□□□□□ -2.13
CHD8-212ENST00000557329 TRAV9-1A0A075B6T8 112 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 A6NN06 94 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 D6R8Y8 96 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 ARPC5O15511 151 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 PDE6DO43924 150 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 SEC11AP67812 179 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 Q5BKY6 102 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 DEFB105AQ8NG35 78 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 MBD3L1Q8WWY6 194 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 SMIM12Q96EX1 92 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 OBSCN-AS1Q96MR7 158 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 C20orf78Q9BR46 151 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 SMIM2Q9BVW6 85 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 ERG28Q9UKR5 140 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 CBY1Q9Y3M2 126 aa1.72□□□□□ -2.13
CHD8-212ENST00000557329 NDUFA6P56556 154 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 SEC61GP60059 68 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 PMVKQ15126 192 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 PDZD11Q5EBL8 140 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 BOD1L2Q8IYS8 172 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 SPANXA2-OT1Q8N9U9 137 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 Q96NJ1 140 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 RBM12B-AS1Q9P1G2 102 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 LAMTOR3Q9UHA4 124 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 CYSLTR1Q9Y271 337 aa1.71□□□□□ -2.14
CHD8-212ENST00000557329 LINC00862A6NCI5 91 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 UMAD1C9J7I0 102 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 H3BRM9 83 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 NPYP01303 97 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 SPRR2EP22531 72 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 SPRR2BP35325 72 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 SPRR2AP35326 72 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 C6orf99Q4VX62 202 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 C1orf195Q5TG92 126 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 FAM104BQ5XKR9 115 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 Q8NDZ9 215 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 Q9BRP9 147 aa1.7□□□□□ -2.14
CHD8-212ENST00000557329 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 A0A0G2JQZ4 141 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 TRBV10-3A0A0K0K1G6 114 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 HMSDA8MTL9 139 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 F8W036 122 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 RPL23P62829 140 aaKnown RBP1.69□□□□□ -2.14
CHD8-212ENST00000557329 JOSD1Q15040 202 aaPredicted RBP1.69□□□□□ -2.14
CHD8-212ENST00000557329 TAL2Q16559 108 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 MEIG1Q5JSS6 88 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 S100A7L2Q5SY68 101 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 C10orf91Q5T1B1 145 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 MRPL54Q6P161 138 aaKnown RBP1.69□□□□□ -2.14
CHD8-212ENST00000557329 TMEM136Q6ZRR5 245 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 PRELID3AQ96N28 172 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 AMELXQ99217 191 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 MAP1LC3AQ9H492 121 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 NAT8BQ9UHF3 227 aa1.69□□□□□ -2.14
CHD8-212ENST00000557329 TRBV24-1A0A075B6N3 115 aa1.68□□□□□ -2.14
CHD8-212ENST00000557329 LOC107984156A0A0G2JMH3 177 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms