RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TMEM223A0PJW6 202 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 LINC01546A6NGU7 62 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 D6R8Y8 96 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 F8VRH5 84 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 H7C2G1 150 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 IGKV1-5P01602 117 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 IGHV3-30P01768 117 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 IGHV3-30-5P0DP03 117 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 HTN1P15515 57 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 HAMPP81172 84 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 SPINK13Q1W4C9 94 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 MRPL51Q4U2R6 128 aaKnown RBP3.26□□□□□ -1.89
ATXN3-247ENST00000557311 C2orf83Q53S99 150 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 LINC00612Q8N6U2 182 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 TMEM263Q8WUH6 116 aaKnown RBP3.26□□□□□ -1.89
ATXN3-247ENST00000557311 C16orf74Q96GX8 76 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 ICOSQ9Y6W8 199 aa3.26□□□□□ -1.89
ATXN3-247ENST00000557311 A0A096LPF7 62 aa3.25□□□□□ -1.89
ATXN3-247ENST00000557311 IGKV3D-7A0A0C4DH55 119 aa3.25□□□□□ -1.89
ATXN3-247ENST00000557311 A0A0G2JRQ6 117 aa3.25□□□□□ -1.89
ATXN3-247ENST00000557311 PMS2P5A8MQ11 134 aa3.25□□□□□ -1.89
ATXN3-247ENST00000557311 DNAH10OSP0CZ25 163 aa3.25□□□□□ -1.89
ATXN3-247ENST00000557311 ATP11AUNQ6ZP68 121 aa3.25□□□□□ -1.89
ATXN3-247ENST00000557311 UBE2D4Q9Y2X8 147 aa3.25□□□□□ -1.89
ATXN3-247ENST00000557311 PHLDA3Q9Y5J5 127 aa3.25□□□□□ -1.89
ATXN3-247ENST00000557311 TRBV10-3A0A0K0K1G6 114 aa3.24□□□□□ -1.89
ATXN3-247ENST00000557311 H0Y9J4 135 aa3.24□□□□□ -1.89
ATXN3-247ENST00000557311 LINC00313P59037 77 aa3.24□□□□□ -1.89
ATXN3-247ENST00000557311 DIRC1Q969H9 104 aa3.24□□□□□ -1.89
ATXN3-247ENST00000557311 LYZP61626 148 aa3.23□□□□□ -1.89
ATXN3-247ENST00000557311 LINC00269Q8N2A0 174 aa3.23□□□□□ -1.89
ATXN3-247ENST00000557311 TRGV2A0A075B6R0 118 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 IGKV1D-37A0A075B6S9 117 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 LRCOL1A6NCL2 159 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 M0R3E3 92 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 SH2D1AO60880 128 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 ARMS2P0C7Q2 107 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 LINC01554Q52M75 96 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 MIR17HGQ75NE6 70 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 CLEC2BQ92478 149 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 Q9HAA7 133 aa3.22□□□□□ -1.89
ATXN3-247ENST00000557311 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
ATXN3-247ENST00000557311 TRAV23DV6A0A075B6W5 121 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 A0A087WVE0 104 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 IGHV3OR16-9A0A0B4J2B5 98 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 LOC100131303A0A0U1RQF7 123 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 PSCAO43653 123 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 COX7A2P2O60397 106 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 FAM229BQ4G0N7 80 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 C6orf99Q4VX62 202 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 SPANXN1Q5VSR9 72 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 Q6ZTI0 123 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 SMIM29Q86T20 159 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 LINC00337Q8N6G1 96 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 Q8N814 137 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 SPTSSBQ8NFR3 76 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 RMI2Q96E14 147 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 TMEM141Q96I45 108 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 LINC00467Q9BRT7 94 aa3.21□□□□□ -1.9
ATXN3-247ENST00000557311 ZNF706Q9Y5V0 76 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-247ENST00000557311 DNAH8Q96JB1 4490 aa3.2□□□□□ -1.9
ATXN3-247ENST00000557311 A0A087WZ39 114 aa3.2□□□□□ -1.9
ATXN3-247ENST00000557311 A6NN06 94 aa3.2□□□□□ -1.9
ATXN3-247ENST00000557311 ERC2-IT1O76042 136 aa3.2□□□□□ -1.9
ATXN3-247ENST00000557311 BAALC-AS2P0C853 105 aa3.2□□□□□ -1.9
ATXN3-247ENST00000557311 RNASE4P34096 147 aaKnown RBP3.2□□□□□ -1.9
ATXN3-247ENST00000557311 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-247ENST00000557311 KIAA0087Q14695 138 aa3.2□□□□□ -1.9
ATXN3-247ENST00000557311 Q6ZSA8 131 aa3.2□□□□□ -1.9
ATXN3-247ENST00000557311 PRNTQ86SH4 94 aa3.2□□□□□ -1.9
ATXN3-247ENST00000557311 PRO0255Q9UI72 69 aa3.2□□□□□ -1.9
ATXN3-247ENST00000557311 TRGV1A0A0A0MS02 117 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 TRBV6-1A0A0K0K1D8 114 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 SDHAF1A6NFY7 115 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 KLLNB2CW77 178 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 I3L3M4 83 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 PSPHP1O15172 72 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 LINC01547P58512 204 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-247ENST00000557311 SYCNQ0VAF6 134 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 MUSTN1Q8IVN3 82 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 C11orf72Q8NBR9 251 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 SCGB3A1Q96QR1 104 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 CYP4F30PQ9H0H9 118 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 NDUFA12Q9UI09 145 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 SNURFQ9Y675 71 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
ATXN3-247ENST00000557311 IGKV1OR2-108A0A075B7D4 117 aa3.18□□□□□ -1.9
ATXN3-247ENST00000557311 TRAV12-3A0A0B4J271 114 aa3.18□□□□□ -1.9
ATXN3-247ENST00000557311 RPL28P46779 137 aaKnown RBP3.18□□□□□ -1.9
ATXN3-247ENST00000557311 SCXQ7RTU7 201 aa3.18□□□□□ -1.9
ATXN3-247ENST00000557311 WFDC10BQ8IUB3 73 aa3.18□□□□□ -1.9
ATXN3-247ENST00000557311 TRAV22A0A0B4J277 110 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 A0A0J9YXV3 536 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 hDV103S1A0JD37 113 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 C11orf86A6NJI1 115 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 H3BRN7 92 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 K7EQD1 137 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 LEPROTO15243 131 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms