RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 MUC7Q8TAX7 377 aa10.1□□□□□ -0.79
TMEM55B-207ENST00000557041 C2orf48Q96LS8 159 aa10.1□□□□□ -0.79
TMEM55B-207ENST00000557041 UQCRQO14949 82 aa10.09□□□□□ -0.79
TMEM55B-207ENST00000557041 Q6ZVQ6 151 aa10.08□□□□□ -0.8
TMEM55B-207ENST00000557041 GVQW2A0A096LPI5 108 aaPredicted RBP10.08□□□□□ -0.8
TMEM55B-207ENST00000557041 WIPF1O43516 503 aa10.08□□□□□ -0.8
TMEM55B-207ENST00000557041 COX7CP15954 63 aa10.06□□□□□ -0.8
TMEM55B-207ENST00000557041 Q6ZQT0 140 aa10.06□□□□□ -0.8
TMEM55B-207ENST00000557041 ELOF1P60002 83 aaKnown RBP10.06□□□□□ -0.8
TMEM55B-207ENST00000557041 CSMD3Q7Z407 3707 aa10.06□□□□□ -0.8
TMEM55B-207ENST00000557041 ST20-AS1Q8NBB2 130 aa10.06□□□□□ -0.8
TMEM55B-207ENST00000557041 LINC00167Q96N53 147 aa10.05□□□□□ -0.8
TMEM55B-207ENST00000557041 F8WEM9 126 aa10.05□□□□□ -0.8
TMEM55B-207ENST00000557041 DNAH10OSP0CZ25 163 aa10.04□□□□□ -0.8
TMEM55B-207ENST00000557041 LINC01547P58512 204 aaPredicted RBP10.04□□□□□ -0.8
TMEM55B-207ENST00000557041 PRLHP81277 87 aa10.04□□□□□ -0.8
TMEM55B-207ENST00000557041 SNURFQ9Y675 71 aa10.03□□□□□ -0.8
TMEM55B-207ENST00000557041 FUSP35637 526 aaKnown RBP eCLIP10.03□□□□□ -0.8
TMEM55B-207ENST00000557041 A0A0G2JQZ4 141 aa10.03□□□□□ -0.8
TMEM55B-207ENST00000557041 A0A1W2PNN7 141 aa10.03□□□□□ -0.8
TMEM55B-207ENST00000557041 SERP2Q8N6R1 65 aa10.02□□□□□ -0.8
TMEM55B-207ENST00000557041 CHTF8P0CG12 524 aa10.02□□□□□ -0.81
TMEM55B-207ENST00000557041 BPY2O14599 106 aa10.01□□□□□ -0.81
TMEM55B-207ENST00000557041 PDE6GP18545 87 aa10.01□□□□□ -0.81
TMEM55B-207ENST00000557041 DEFB116Q30KQ4 102 aa10.01□□□□□ -0.81
TMEM55B-207ENST00000557041 KRTAP26-1Q6PEX3 210 aa10.01□□□□□ -0.81
TMEM55B-207ENST00000557041 MRPL55Q7Z7F7 128 aaKnown RBP10.01□□□□□ -0.81
TMEM55B-207ENST00000557041 OBSCN-AS1Q96MR7 158 aa10□□□□□ -0.81
TMEM55B-207ENST00000557041 LOC107984640A0A0U1RRK4 108 aa9.99□□□□□ -0.81
TMEM55B-207ENST00000557041 LINC00528Q8N1L1 170 aa9.99□□□□□ -0.81
TMEM55B-207ENST00000557041 MDFIQ99750 246 aa9.98□□□□□ -0.81
TMEM55B-207ENST00000557041 C1orf137Q5JT78 98 aa9.96□□□□□ -0.82
TMEM55B-207ENST00000557041 ATP5EP2Q5VTU8 51 aa9.96□□□□□ -0.82
TMEM55B-207ENST00000557041 TM2D3Q9BRN9 247 aa9.95□□□□□ -0.82
TMEM55B-207ENST00000557041 UBE2AP49459 152 aa9.95□□□□□ -0.82
TMEM55B-207ENST00000557041 SRRM2Q9UQ35 2752 aaKnown RBP9.94□□□□□ -0.82
TMEM55B-207ENST00000557041 ERC2-IT1O76042 136 aa9.94□□□□□ -0.82
TMEM55B-207ENST00000557041 DHRS4-AS1Q9P1J3 65 aa9.94□□□□□ -0.82
TMEM55B-207ENST00000557041 H3BQ85 93 aa9.93□□□□□ -0.82
TMEM55B-207ENST00000557041 REG3GQ6UW15 175 aa9.93□□□□□ -0.82
TMEM55B-207ENST00000557041 Q8N377 158 aa9.92□□□□□ -0.82
TMEM55B-207ENST00000557041 Q6ZRX8 168 aa9.92□□□□□ -0.82
TMEM55B-207ENST00000557041 LOC110117498A0A087WWA1 95 aa9.91□□□□□ -0.82
TMEM55B-207ENST00000557041 PHF5AQ7RTV0 110 aaKnown RBP9.91□□□□□ -0.82
TMEM55B-207ENST00000557041 KRTAP1-5Q9BYS1 174 aa9.91□□□□□ -0.82
TMEM55B-207ENST00000557041 CYSTM1Q9H1C7 97 aa9.91□□□□□ -0.82
TMEM55B-207ENST00000557041 TGP01266 2768 aa9.91□□□□□ -0.82
TMEM55B-207ENST00000557041 KCNQ1DNQ9H478 68 aa9.9□□□□□ -0.82
TMEM55B-207ENST00000557041 ANK2Q01484 3957 aa9.89□□□□□ -0.83
TMEM55B-207ENST00000557041 IGLV1-50A0A075B6I6 118 aa9.88□□□□□ -0.83
TMEM55B-207ENST00000557041 Q9BRP9 147 aa9.88□□□□□ -0.83
TMEM55B-207ENST00000557041 TRBV7-4A0A0J9YYF1 115 aa9.87□□□□□ -0.83
TMEM55B-207ENST00000557041 PRYO14603 147 aa9.86□□□□□ -0.83
TMEM55B-207ENST00000557041 FAM30AQ9NZY2 134 aa9.86□□□□□ -0.83
TMEM55B-207ENST00000557041 COL7A1Q02388 2944 aa9.85□□□□□ -0.83
TMEM55B-207ENST00000557041 HRCT1Q6UXD1 115 aa9.85□□□□□ -0.83
TMEM55B-207ENST00000557041 TRBV7-6A0A0J9YX20 115 aa9.85□□□□□ -0.83
TMEM55B-207ENST00000557041 A0A087WSZ3 146 aa9.84□□□□□ -0.83
TMEM55B-207ENST00000557041 WFDC13Q8IUB5 93 aa9.84□□□□□ -0.83
TMEM55B-207ENST00000557041 CRYGAP11844 174 aa9.82□□□□□ -0.84
TMEM55B-207ENST00000557041 IGLV9-49A0A0B4J1Y8 123 aa9.81□□□□□ -0.84
TMEM55B-207ENST00000557041 F8WDY8 70 aa9.81□□□□□ -0.84
TMEM55B-207ENST00000557041 J3KT08 172 aa9.81□□□□□ -0.84
TMEM55B-207ENST00000557041 C14orf177Q52M58 125 aa9.8□□□□□ -0.84
TMEM55B-207ENST00000557041 TRAV7A0A075B6U4 112 aa9.8□□□□□ -0.84
TMEM55B-207ENST00000557041 CXCL6P80162 114 aa9.79□□□□□ -0.84
TMEM55B-207ENST00000557041 PRR4Q16378 134 aa9.79□□□□□ -0.84
TMEM55B-207ENST00000557041 LINC00476Q8WZB0 136 aa9.79□□□□□ -0.84
TMEM55B-207ENST00000557041 C16orf90A8MZG2 172 aa9.78□□□□□ -0.84
TMEM55B-207ENST00000557041 LY6G6CO95867 125 aa9.78□□□□□ -0.84
TMEM55B-207ENST00000557041 A0A1W2PNM2 257 aa9.77□□□□□ -0.84
TMEM55B-207ENST00000557041 TLX1NBP0CAT3 122 aa9.77□□□□□ -0.85
TMEM55B-207ENST00000557041 H0Y9J4 135 aa9.76□□□□□ -0.85
TMEM55B-207ENST00000557041 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
TMEM55B-207ENST00000557041 EPM2AB3EWF7 344 aa9.76□□□□□ -0.85
TMEM55B-207ENST00000557041 FAM236DA0A1B0GTK5 79 aa9.76□□□□□ -0.85
TMEM55B-207ENST00000557041 FAM236CP0DP71 79 aa9.76□□□□□ -0.85
TMEM55B-207ENST00000557041 TMEM258P61165 79 aa9.76□□□□□ -0.85
TMEM55B-207ENST00000557041 SMIM29Q86T20 159 aa9.76□□□□□ -0.85
TMEM55B-207ENST00000557041 B9D2Q9BPU9 175 aa9.76□□□□□ -0.85
TMEM55B-207ENST00000557041 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
TMEM55B-207ENST00000557041 KRTAP7-1Q8IUC3 87 aa9.75□□□□□ -0.85
TMEM55B-207ENST00000557041 RPL37AP61513 92 aaKnown RBP9.75□□□□□ -0.85
TMEM55B-207ENST00000557041 Q8NBF4 154 aa9.74□□□□□ -0.85
TMEM55B-207ENST00000557041 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
TMEM55B-207ENST00000557041 K7EQZ3 153 aa9.7□□□□□ -0.86
TMEM55B-207ENST00000557041 TMEM254Q8TBM7 123 aa9.7□□□□□ -0.86
TMEM55B-207ENST00000557041 LRCOL1A6NCL2 159 aa9.7□□□□□ -0.86
TMEM55B-207ENST00000557041 IGFL1Q6UW32 110 aa9.69□□□□□ -0.86
TMEM55B-207ENST00000557041 IGKV4-1P06312 121 aa9.69□□□□□ -0.86
TMEM55B-207ENST00000557041 ANAPC11Q9NYG5 84 aa9.68□□□□□ -0.86
TMEM55B-207ENST00000557041 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
TMEM55B-207ENST00000557041 NDUFS5O43920 106 aa9.67□□□□□ -0.86
TMEM55B-207ENST00000557041 IGLV5-48A0A075B6I7 105 aa9.66□□□□□ -0.86
TMEM55B-207ENST00000557041 PANO1I0J062 215 aa9.66□□□□□ -0.86
TMEM55B-207ENST00000557041 SPINK6Q6UWN8 80 aa9.65□□□□□ -0.86
TMEM55B-207ENST00000557041 KRTAP11-1Q8IUC1 163 aa9.65□□□□□ -0.87
TMEM55B-207ENST00000557041 C9orf163Q8N9P6 203 aa9.65□□□□□ -0.87
TMEM55B-207ENST00000557041 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.87
TMEM55B-207ENST00000557041 KRTAP4-16G5E9R7 235 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms