RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 TLX1NBP0CAT3 122 aa5.64□□□□□ -1.51
SYNE2-224ENST00000557024 MIR7-3HGQ8N6C7 128 aa5.64□□□□□ -1.51
SYNE2-224ENST00000557024 COPS9Q8WXC6 57 aa5.64□□□□□ -1.51
SYNE2-224ENST00000557024 NPC2P61916 151 aa5.63□□□□□ -1.51
SYNE2-224ENST00000557024 DAND5Q8N907 189 aa5.63□□□□□ -1.51
SYNE2-224ENST00000557024 HIST1H4GQ99525 98 aa5.63□□□□□ -1.51
SYNE2-224ENST00000557024 C1orf137Q5JT78 98 aa5.62□□□□□ -1.51
SYNE2-224ENST00000557024 Q6ZVH6 145 aa5.62□□□□□ -1.51
SYNE2-224ENST00000557024 XAGE1AQ9HD64 81 aa5.62□□□□□ -1.51
SYNE2-224ENST00000557024 TP73-AS1Q9UF72 201 aa5.62□□□□□ -1.51
SYNE2-224ENST00000557024 IFITM1P13164 125 aa5.61□□□□□ -1.51
SYNE2-224ENST00000557024 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
SYNE2-224ENST00000557024 SPANXDQ9BXN6 97 aa5.61□□□□□ -1.51
SYNE2-224ENST00000557024 SND1-IT1Q9HBX3 110 aa5.61□□□□□ -1.51
SYNE2-224ENST00000557024 SPANXB1Q9NS25 103 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-224ENST00000557024 SPANXCQ9NY87 97 aa5.61□□□□□ -1.51
SYNE2-224ENST00000557024 HIGD1BQ9P298 99 aa5.61□□□□□ -1.51
SYNE2-224ENST00000557024 A0A1W2PNN7 141 aa5.6□□□□□ -1.51
SYNE2-224ENST00000557024 RPL24P83731 157 aaKnown RBP5.6□□□□□ -1.51
SYNE2-224ENST00000557024 ADAMTSL4-AS1Q5T5F5 129 aa5.6□□□□□ -1.51
SYNE2-224ENST00000557024 TAL2Q16559 108 aa5.59□□□□□ -1.51
SYNE2-224ENST00000557024 MUSTN1Q8IVN3 82 aa5.59□□□□□ -1.51
SYNE2-224ENST00000557024 NKAPP1Q8N9T2 125 aa5.59□□□□□ -1.51
SYNE2-224ENST00000557024 LINC00308Q8TCZ7 52 aa5.59□□□□□ -1.51
SYNE2-224ENST00000557024 LITAFQ99732 161 aa5.59□□□□□ -1.51
SYNE2-224ENST00000557024 IGLV1-50A0A075B6I6 118 aa5.58□□□□□ -1.52
SYNE2-224ENST00000557024 H0Y9J4 135 aa5.58□□□□□ -1.52
SYNE2-224ENST00000557024 IGLV7-43P04211 117 aa5.58□□□□□ -1.52
SYNE2-224ENST00000557024 C9orf129Q5T035 196 aaKnown RBP5.58□□□□□ -1.52
SYNE2-224ENST00000557024 C2orf91Q6ZV80 131 aa5.58□□□□□ -1.52
SYNE2-224ENST00000557024 PHF5AQ7RTV0 110 aaKnown RBP5.58□□□□□ -1.52
SYNE2-224ENST00000557024 FAM19A5Q7Z5A7 132 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-224ENST00000557024 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
SYNE2-224ENST00000557024 HSD52Q0P140 79 aa5.57□□□□□ -1.52
SYNE2-224ENST00000557024 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
SYNE2-224ENST00000557024 LOC107984156A0A0G2JMH3 177 aa5.56□□□□□ -1.52
SYNE2-224ENST00000557024 TSPAN13O95857 204 aa5.56□□□□□ -1.52
SYNE2-224ENST00000557024 KRTAP1-4P0C5Y4 121 aa5.56□□□□□ -1.52
SYNE2-224ENST00000557024 CTAG1AP78358 180 aa5.56□□□□□ -1.52
SYNE2-224ENST00000557024 SOSTDC1Q6X4U4 206 aa5.56□□□□□ -1.52
SYNE2-224ENST00000557024 ARL17AQ8IVW1 177 aa5.56□□□□□ -1.52
SYNE2-224ENST00000557024 CEND1Q8N111 149 aa5.56□□□□□ -1.52
SYNE2-224ENST00000557024 FAM168BA1KXE4 195 aa5.55□□□□□ -1.52
SYNE2-224ENST00000557024 GAGE10A6NGK3 116 aa5.55□□□□□ -1.52
SYNE2-224ENST00000557024 M0QXV9 152 aa5.55□□□□□ -1.52
SYNE2-224ENST00000557024 M0R143 59 aa5.55□□□□□ -1.52
SYNE2-224ENST00000557024 NCR3O14931 201 aa5.55□□□□□ -1.52
SYNE2-224ENST00000557024 NDUFC2O95298 119 aa5.55□□□□□ -1.52
SYNE2-224ENST00000557024 DDTP30046 118 aa5.55□□□□□ -1.52
SYNE2-224ENST00000557024 LBHQ53QV2 105 aaPredicted RBP5.55□□□□□ -1.52
SYNE2-224ENST00000557024 S100A7L2Q5SY68 101 aa5.55□□□□□ -1.52
SYNE2-224ENST00000557024 OR13C6PQ8NH95 151 aa5.55□□□□□ -1.52
SYNE2-224ENST00000557024 A4D1N5 150 aa5.54□□□□□ -1.52
SYNE2-224ENST00000557024 PCP4L1A6NKN8 68 aa5.54□□□□□ -1.52
SYNE2-224ENST00000557024 VPREB1P12018 145 aa5.54□□□□□ -1.52
SYNE2-224ENST00000557024 RPL13AP40429 203 aaKnown RBP5.54□□□□□ -1.52
SYNE2-224ENST00000557024 UBE2BP63146 152 aa5.54□□□□□ -1.52
SYNE2-224ENST00000557024 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
SYNE2-224ENST00000557024 RAB37Q96AX2 223 aa5.54□□□□□ -1.52
SYNE2-224ENST00000557024 PPDPFQ9H3Y8 114 aa5.54□□□□□ -1.52
SYNE2-224ENST00000557024 C22orf24Q9Y442 160 aa5.54□□□□□ -1.52
SYNE2-224ENST00000557024 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
SYNE2-224ENST00000557024 M0R378 163 aa5.53□□□□□ -1.52
SYNE2-224ENST00000557024 HINT1P49773 126 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-224ENST00000557024 MRPL55Q7Z7F7 128 aaKnown RBP5.53□□□□□ -1.52
SYNE2-224ENST00000557024 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
SYNE2-224ENST00000557024 TRAV13-2A0A0B4J235 113 aa5.52□□□□□ -1.53
SYNE2-224ENST00000557024 TRBV10-2A0A0K0K1G8 114 aa5.52□□□□□ -1.53
SYNE2-224ENST00000557024 A6NDN8 102 aa5.52□□□□□ -1.53
SYNE2-224ENST00000557024 BATFQ16520 125 aa5.52□□□□□ -1.53
SYNE2-224ENST00000557024 CBY1Q9Y3M2 126 aa5.52□□□□□ -1.53
SYNE2-224ENST00000557024 FXYD2P54710 66 aa5.51□□□□□ -1.53
SYNE2-224ENST00000557024 BVES-AS1Q5T3Y7 98 aa5.51□□□□□ -1.53
SYNE2-224ENST00000557024 LINC00167Q96N53 147 aa5.51□□□□□ -1.53
SYNE2-224ENST00000557024 TMEM126AQ9H061 195 aa5.51□□□□□ -1.53
SYNE2-224ENST00000557024 NHP2Q9NX24 153 aaKnown RBP5.51□□□□□ -1.53
SYNE2-224ENST00000557024 RPL37AP8A6NKH3 93 aa5.5□□□□□ -1.53
SYNE2-224ENST00000557024 IGKV2-28A0A075B6P5 120 aa5.49□□□□□ -1.53
SYNE2-224ENST00000557024 A0A0B4J2C4 111 aa5.49□□□□□ -1.53
SYNE2-224ENST00000557024 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
SYNE2-224ENST00000557024 IGKV2D-28P01615 120 aa5.49□□□□□ -1.53
SYNE2-224ENST00000557024 CFC1BP0CG36 223 aa5.49□□□□□ -1.53
SYNE2-224ENST00000557024 CFC1P0CG37 223 aa5.49□□□□□ -1.53
SYNE2-224ENST00000557024 Q1RN00 199 aa5.49□□□□□ -1.53
SYNE2-224ENST00000557024 Q8NDZ9 215 aa5.49□□□□□ -1.53
SYNE2-224ENST00000557024 H7C2G1 150 aa5.48□□□□□ -1.53
SYNE2-224ENST00000557024 KRTAP7-1Q8IUC3 87 aa5.48□□□□□ -1.53
SYNE2-224ENST00000557024 LINC00337Q8N6G1 96 aa5.48□□□□□ -1.53
SYNE2-224ENST00000557024 TRAV23DV6A0A075B6W5 121 aa5.47□□□□□ -1.53
SYNE2-224ENST00000557024 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
SYNE2-224ENST00000557024 PRO1854Q9UHT4 67 aa5.47□□□□□ -1.53
SYNE2-224ENST00000557024 ETDCA0A1B0GVM5 59 aa5.45□□□□□ -1.54
SYNE2-224ENST00000557024 IGLV6-57P01721 117 aa5.45□□□□□ -1.54
SYNE2-224ENST00000557024 VAMP3Q15836 100 aa5.45□□□□□ -1.54
SYNE2-224ENST00000557024 KCNQ1DNQ9H478 68 aa5.45□□□□□ -1.54
SYNE2-224ENST00000557024 A0A087X002 238 aa5.44□□□□□ -1.54
SYNE2-224ENST00000557024 A0A1B0GWB2 263 aa5.44□□□□□ -1.54
SYNE2-224ENST00000557024 K7ERJ3 54 aa5.44□□□□□ -1.54
SYNE2-224ENST00000557024 ZNF73O43830 326 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-224ENST00000557024 UBE2AP49459 152 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms