RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 FXYD2P54710 66 aa6.06□□□□□ -1.44
TMEM260-213ENST00000556929 PRYO14603 147 aa6.05□□□□□ -1.44
TMEM260-213ENST00000556929 IGLV6-57P01721 117 aa6.05□□□□□ -1.44
TMEM260-213ENST00000556929 LINC00337Q8N6G1 96 aa6.05□□□□□ -1.44
TMEM260-213ENST00000556929 BIRC6Q9NR09 4857 aa6.05□□□□□ -1.44
TMEM260-213ENST00000556929 RYR1P21817 5038 aa6.05□□□□□ -1.44
TMEM260-213ENST00000556929 TRAV23DV6A0A075B6W5 121 aa6.04□□□□□ -1.44
TMEM260-213ENST00000556929 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
TMEM260-213ENST00000556929 CFC1BP0CG36 223 aa6.04□□□□□ -1.44
TMEM260-213ENST00000556929 CFC1P0CG37 223 aa6.04□□□□□ -1.44
TMEM260-213ENST00000556929 HINT1P49773 126 aaPredicted RBP6.04□□□□□ -1.44
TMEM260-213ENST00000556929 RPL37AP61513 92 aaKnown RBP6.04□□□□□ -1.44
TMEM260-213ENST00000556929 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
TMEM260-213ENST00000556929 BVES-AS1Q5T3Y7 98 aa6.04□□□□□ -1.44
TMEM260-213ENST00000556929 REG3GQ6UW15 175 aa6.04□□□□□ -1.44
TMEM260-213ENST00000556929 NHP2Q9NX24 153 aaKnown RBP6.04□□□□□ -1.44
TMEM260-213ENST00000556929 PSORS1C2Q9UIG4 136 aa6.04□□□□□ -1.44
TMEM260-213ENST00000556929 PLA2G1BP04054 148 aaKnown RBP6.03□□□□□ -1.44
TMEM260-213ENST00000556929 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
TMEM260-213ENST00000556929 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
TMEM260-213ENST00000556929 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
TMEM260-213ENST00000556929 PRO1854Q9UHT4 67 aa6.02□□□□□ -1.45
TMEM260-213ENST00000556929 ETDCA0A1B0GVM5 59 aa6.01□□□□□ -1.45
TMEM260-213ENST00000556929 ZNF73O43830 326 aaPredicted RBP6.01□□□□□ -1.45
TMEM260-213ENST00000556929 BCE1O60756 84 aa6.01□□□□□ -1.45
TMEM260-213ENST00000556929 Q8N1X5 172 aa6.01□□□□□ -1.45
TMEM260-213ENST00000556929 KIAA1109Q2LD37 5005 aa6□□□□□ -1.45
TMEM260-213ENST00000556929 A0A1B0GWB2 263 aa6□□□□□ -1.45
TMEM260-213ENST00000556929 PCP4L1A6NKN8 68 aa6□□□□□ -1.45
TMEM260-213ENST00000556929 SPRR1AP35321 89 aa6□□□□□ -1.45
TMEM260-213ENST00000556929 BATFQ16520 125 aa6□□□□□ -1.45
TMEM260-213ENST00000556929 Q1RN00 199 aa6□□□□□ -1.45
TMEM260-213ENST00000556929 Q5VSD8 79 aa6□□□□□ -1.45
TMEM260-213ENST00000556929 FAM19A1Q7Z5A9 133 aa6□□□□□ -1.45
TMEM260-213ENST00000556929 DIRC1Q969H9 104 aa6□□□□□ -1.45
TMEM260-213ENST00000556929 HSPG2P98160 4391 aa5.99□□□□□ -1.45
TMEM260-213ENST00000556929 H3BS24 57 aa5.99□□□□□ -1.45
TMEM260-213ENST00000556929 H7C2G1 150 aa5.99□□□□□ -1.45
TMEM260-213ENST00000556929 IGLV7-43P04211 117 aa5.99□□□□□ -1.45
TMEM260-213ENST00000556929 UBE2AP49459 152 aa5.99□□□□□ -1.45
TMEM260-213ENST00000556929 C6orf99Q4VX62 202 aa5.99□□□□□ -1.45
TMEM260-213ENST00000556929 SMIM11BQ8TCY0 68 aa5.99□□□□□ -1.45
TMEM260-213ENST00000556929 TRBV7-6A0A0J9YX20 115 aa5.98□□□□□ -1.45
TMEM260-213ENST00000556929 RPL28P46779 137 aaKnown RBP5.98□□□□□ -1.45
TMEM260-213ENST00000556929 VAMP3Q15836 100 aa5.98□□□□□ -1.45
TMEM260-213ENST00000556929 B5MCH6 92 aa5.97□□□□□ -1.45
TMEM260-213ENST00000556929 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
TMEM260-213ENST00000556929 H0Y9J4 135 aa5.97□□□□□ -1.45
TMEM260-213ENST00000556929 K7ERJ3 54 aa5.97□□□□□ -1.45
TMEM260-213ENST00000556929 ZNF861PO60384 105 aa5.97□□□□□ -1.45
TMEM260-213ENST00000556929 COX7BP24311 80 aa5.97□□□□□ -1.45
TMEM260-213ENST00000556929 PRLHP81277 87 aa5.96□□□□□ -1.46
TMEM260-213ENST00000556929 Q6ZRX8 168 aa5.96□□□□□ -1.46
TMEM260-213ENST00000556929 FAT1Q14517 4588 aa5.96□□□□□ -1.46
TMEM260-213ENST00000556929 TSPAN13O95857 204 aa5.95□□□□□ -1.46
TMEM260-213ENST00000556929 PSMB2P49721 201 aa5.95□□□□□ -1.46
TMEM260-213ENST00000556929 ELOF1P60002 83 aaKnown RBP5.95□□□□□ -1.46
TMEM260-213ENST00000556929 H0YGX0 51 aa5.94□□□□□ -1.46
TMEM260-213ENST00000556929 COX6CP09669 75 aa5.94□□□□□ -1.46
TMEM260-213ENST00000556929 INAFM2P0DMQ5 153 aa5.94□□□□□ -1.46
TMEM260-213ENST00000556929 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
TMEM260-213ENST00000556929 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
TMEM260-213ENST00000556929 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
TMEM260-213ENST00000556929 KRTAP13-1Q8IUC0 172 aa5.94□□□□□ -1.46
TMEM260-213ENST00000556929 HIGD2AQ9BW72 106 aa5.94□□□□□ -1.46
TMEM260-213ENST00000556929 SNHG12Q9BXW3 62 aa5.94□□□□□ -1.46
TMEM260-213ENST00000556929 VPS13BQ7Z7G8 4022 aa5.94□□□□□ -1.46
TMEM260-213ENST00000556929 SLC25A20O43772 301 aa5.93□□□□□ -1.46
TMEM260-213ENST00000556929 DHRS4-AS1Q9P1J3 65 aa5.93□□□□□ -1.46
TMEM260-213ENST00000556929 SNCGO76070 127 aa5.92□□□□□ -1.46
TMEM260-213ENST00000556929 SMCR5Q8TEV8 140 aa5.92□□□□□ -1.46
TMEM260-213ENST00000556929 TRIAP1O43715 76 aa5.91□□□□□ -1.46
TMEM260-213ENST00000556929 SCGB1C2P0DMR2 95 aa5.91□□□□□ -1.46
TMEM260-213ENST00000556929 COL5A1-AS1Q5SY13 56 aa5.91□□□□□ -1.46
TMEM260-213ENST00000556929 Q9BRP9 147 aa5.91□□□□□ -1.46
TMEM260-213ENST00000556929 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
TMEM260-213ENST00000556929 HERC2O95714 4834 aa5.91□□□□□ -1.46
TMEM260-213ENST00000556929 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.46
TMEM260-213ENST00000556929 LINC00575Q6W349 94 aa5.9□□□□□ -1.46
TMEM260-213ENST00000556929 ZNF706Q9Y5V0 76 aaPredicted RBP5.9□□□□□ -1.46
TMEM260-213ENST00000556929 A0A1B0GX51 115 aa5.89□□□□□ -1.47
TMEM260-213ENST00000556929 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
TMEM260-213ENST00000556929 C9orf118A6NHY6 69 aa5.89□□□□□ -1.47
TMEM260-213ENST00000556929 LYRM7Q5U5X0 104 aa5.89□□□□□ -1.47
TMEM260-213ENST00000556929 H3BUT2 72 aa5.88□□□□□ -1.47
TMEM260-213ENST00000556929 TAX1BP3O14907 124 aa5.88□□□□□ -1.47
TMEM260-213ENST00000556929 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
TMEM260-213ENST00000556929 ERC2-IT1O76042 136 aa5.87□□□□□ -1.47
TMEM260-213ENST00000556929 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
TMEM260-213ENST00000556929 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
TMEM260-213ENST00000556929 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
TMEM260-213ENST00000556929 SPRR4Q96PI1 79 aa5.86□□□□□ -1.47
TMEM260-213ENST00000556929 DNAL4O96015 105 aa5.85□□□□□ -1.47
TMEM260-213ENST00000556929 OCIAD2Q56VL3 154 aa5.85□□□□□ -1.47
TMEM260-213ENST00000556929 GAGE2AQ6NT46 116 aa5.85□□□□□ -1.47
TMEM260-213ENST00000556929 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
TMEM260-213ENST00000556929 FAM218AQ96MZ4 157 aa5.85□□□□□ -1.47
TMEM260-213ENST00000556929 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
TMEM260-213ENST00000556929 TRBV20-1A0A075B6N2 111 aa5.84□□□□□ -1.47
TMEM260-213ENST00000556929 A0A1W2PPM0 123 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms