RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 IGLV5-48A0A075B6I7 105 aa-3.95□□□□□ -3.04
LINC00648-203ENST00000556923 SEC11AP67812 179 aa-3.95□□□□□ -3.04
LINC00648-203ENST00000556923 LINC00474Q9P2X8 69 aa-3.95□□□□□ -3.04
LINC00648-203ENST00000556923 PLXNC1O60486 1568 aa-3.96□□□□□ -3.04
LINC00648-203ENST00000556923 TOGARAM1Q9Y4F4 1720 aa-3.96□□□□□ -3.04
LINC00648-203ENST00000556923 SCN7AQ01118 1682 aa-3.97□□□□□ -3.04
LINC00648-203ENST00000556923 MT-ATP8P03928 68 aa-3.97□□□□□ -3.04
LINC00648-203ENST00000556923 ANP32BQ92688 251 aaKnown RBP-3.97□□□□□ -3.04
LINC00648-203ENST00000556923 UQCR10Q9UDW1 63 aa-3.97□□□□□ -3.04
LINC00648-203ENST00000556923 CEP152O94986 1710 aa-3.98□□□□□ -3.05
LINC00648-203ENST00000556923 NMSQ5H8A3 153 aa-3.98□□□□□ -3.05
LINC00648-203ENST00000556923 PYDC1Q8WXC3 89 aa-3.98□□□□□ -3.05
LINC00648-203ENST00000556923 LY75O60449 1722 aa-3.98□□□□□ -3.05
LINC00648-203ENST00000556923 PLEKHH2Q8IVE3 1493 aa-3.98□□□□□ -3.05
LINC00648-203ENST00000556923 SPART-AS1P0CW21 52 aa-3.99□□□□□ -3.05
LINC00648-203ENST00000556923 COMMD6Q7Z4G1 85 aa-3.99□□□□□ -3.05
LINC00648-203ENST00000556923 C5orf38Q86SI9 138 aa-3.99□□□□□ -3.05
LINC00648-203ENST00000556923 LRRC37AA6NMS7 1700 aa-3.99□□□□□ -3.05
LINC00648-203ENST00000556923 NUP188Q5SRE5 1749 aa-3.99□□□□□ -3.05
LINC00648-203ENST00000556923 USP34Q70CQ2 3546 aa-3.99□□□□□ -3.05
LINC00648-203ENST00000556923 NLRP1Q9C000 1473 aa-3.99□□□□□ -3.05
LINC00648-203ENST00000556923 SPTY2D1-AS1A0A0U1RR47 76 aa-4□□□□□ -3.05
LINC00648-203ENST00000556923 M0QZ58 72 aa-4□□□□□ -3.05
LINC00648-203ENST00000556923 SMIM21Q3B7S5 101 aa-4□□□□□ -3.05
LINC00648-203ENST00000556923 TIMM8BQ9Y5J9 83 aaPredicted RBP-4□□□□□ -3.05
LINC00648-203ENST00000556923 TNRC6CQ9HCJ0 1690 aaKnown RBP-4□□□□□ -3.05
LINC00648-203ENST00000556923 EHBP1L1Q8N3D4 1523 aa-4□□□□□ -3.05
LINC00648-203ENST00000556923 PKD1L3Q7Z443 1732 aa-4.01□□□□□ -3.05
LINC00648-203ENST00000556923 RGPD3A6NKT7 1758 aaPredicted RBP-4.02□□□□□ -3.05
LINC00648-203ENST00000556923 RGPD4Q7Z3J3 1758 aa-4.02□□□□□ -3.05
LINC00648-203ENST00000556923 A0A1B0GU69 56 aa-4.02□□□□□ -3.05
LINC00648-203ENST00000556923 SNCAP37840 140 aa-4.02□□□□□ -3.05
LINC00648-203ENST00000556923 SNRNP25Q9BV90 132 aaKnown RBP-4.02□□□□□ -3.05
LINC00648-203ENST00000556923 CRYBG1Q9Y4K1 1723 aa-4.02□□□□□ -3.05
LINC00648-203ENST00000556923 UNC80Q8N2C7 3258 aa-4.02□□□□□ -3.05
LINC00648-203ENST00000556923 ADGRL2O95490 1459 aa-4.03□□□□□ -3.05
LINC00648-203ENST00000556923 DEFB130BP0DP73 79 aa-4.03□□□□□ -3.05
LINC00648-203ENST00000556923 DEFB130AP0DP74 79 aa-4.03□□□□□ -3.05
LINC00648-203ENST00000556923 ARPC4P59998 168 aa-4.03□□□□□ -3.05
LINC00648-203ENST00000556923 LEAP2Q969E1 77 aa-4.03□□□□□ -3.05
LINC00648-203ENST00000556923 CUL7Q14999 1698 aa-4.03□□□□□ -3.06
LINC00648-203ENST00000556923 PREX1Q8TCU6 1659 aa-4.03□□□□□ -3.06
LINC00648-203ENST00000556923 A0A1B0GWA3 101 aa-4.04□□□□□ -3.06
LINC00648-203ENST00000556923 MIF4GDA9UHW6 222 aaKnown RBP-4.04□□□□□ -3.06
LINC00648-203ENST00000556923 DR1Q01658 176 aa-4.04□□□□□ -3.06
LINC00648-203ENST00000556923 EDC4Q6P2E9 1401 aaKnown RBP-4.04□□□□□ -3.06
LINC00648-203ENST00000556923 USP32Q8NFA0 1604 aa-4.05□□□□□ -3.06
LINC00648-203ENST00000556923 ROBO1Q9Y6N7 1651 aa-4.05□□□□□ -3.06
LINC00648-203ENST00000556923 LINC00158P58513 81 aa-4.05□□□□□ -3.06
LINC00648-203ENST00000556923 COX6B2Q6YFQ2 88 aa-4.05□□□□□ -3.06
LINC00648-203ENST00000556923 PDCD11Q14690 1871 aaKnown RBP-4.05□□□□□ -3.06
LINC00648-203ENST00000556923 F8WEM9 126 aa-4.06□□□□□ -3.06
LINC00648-203ENST00000556923 C8orf59Q8N0T1 100 aaPredicted RBP-4.06□□□□□ -3.06
LINC00648-203ENST00000556923 ARL11Q969Q4 196 aa-4.06□□□□□ -3.06
LINC00648-203ENST00000556923 DNMBPQ6XZF7 1577 aa-4.06□□□□□ -3.06
LINC00648-203ENST00000556923 PARP4Q9UKK3 1724 aaKnown RBP-4.07□□□□□ -3.06
LINC00648-203ENST00000556923 Q56UQ5 140 aa-4.07□□□□□ -3.06
LINC00648-203ENST00000556923 PFDN5Q99471 154 aa-4.07□□□□□ -3.06
LINC00648-203ENST00000556923 PHLPP1O60346 1717 aa-4.07□□□□□ -3.06
LINC00648-203ENST00000556923 MAPKBP1O60336 1514 aa-4.08□□□□□ -3.06
LINC00648-203ENST00000556923 PIK3C2BO00750 1634 aa-4.09□□□□□ -3.06
LINC00648-203ENST00000556923 UBE2L3P68036 154 aaKnown RBP-4.09□□□□□ -3.06
LINC00648-203ENST00000556923 CATR1Q13166 79 aa-4.09□□□□□ -3.06
LINC00648-203ENST00000556923 MEIG1Q5JSS6 88 aa-4.09□□□□□ -3.06
LINC00648-203ENST00000556923 C9orf153Q5TBE3 101 aa-4.09□□□□□ -3.06
LINC00648-203ENST00000556923 PSENENQ9NZ42 101 aa-4.09□□□□□ -3.06
LINC00648-203ENST00000556923 A0A1B0GUL6 1792 aa-4.09□□□□□ -3.06
LINC00648-203ENST00000556923 POLR1AO95602 1720 aaPredicted RBP-4.09□□□□□ -3.06
LINC00648-203ENST00000556923 MAGI3Q5TCQ9 1506 aa-4.1□□□□□ -3.07
LINC00648-203ENST00000556923 C3orf79P0CE67 100 aa-4.1□□□□□ -3.07
LINC00648-203ENST00000556923 IAPPP10997 89 aa-4.11□□□□□ -3.07
LINC00648-203ENST00000556923 WIZO95785 1651 aa-4.12□□□□□ -3.07
LINC00648-203ENST00000556923 TMEM131LA2VDJ0 1609 aa-4.12□□□□□ -3.07
LINC00648-203ENST00000556923 TRBV7-7A0A0K0K1E9 115 aa-4.12□□□□□ -3.07
LINC00648-203ENST00000556923 C6orf201Q7Z4U5 140 aa-4.12□□□□□ -3.07
LINC00648-203ENST00000556923 FOCADQ5VW36 1801 aa-4.13□□□□□ -3.07
LINC00648-203ENST00000556923 RGPD8O14715 1765 aaPredicted RBP-4.13□□□□□ -3.07
LINC00648-203ENST00000556923 RGPD5Q99666 1765 aa-4.13□□□□□ -3.07
LINC00648-203ENST00000556923 SAA2P0DJI9 122 aaPredicted RBP-4.14□□□□□ -3.07
LINC00648-203ENST00000556923 SFTA2Q6UW10 78 aa-4.14□□□□□ -3.07
LINC00648-203ENST00000556923 DEPDC5O75140 1603 aa-4.14□□□□□ -3.07
LINC00648-203ENST00000556923 APOC2P02655 101 aa-4.15□□□□□ -3.07
LINC00648-203ENST00000556923 KRTAP19-2Q3LHN2 52 aa-4.15□□□□□ -3.07
LINC00648-203ENST00000556923 PLCH1Q4KWH8 1693 aa-4.16□□□□□ -3.07
LINC00648-203ENST00000556923 ATP10BO94823 1461 aa-4.16□□□□□ -3.08
LINC00648-203ENST00000556923 DNAH12Q6ZR08 3092 aa-4.16□□□□□ -3.08
LINC00648-203ENST00000556923 COX7BP24311 80 aa-4.16□□□□□ -3.08
LINC00648-203ENST00000556923 SERP2Q8N6R1 65 aa-4.16□□□□□ -3.08
LINC00648-203ENST00000556923 TRGV9Q99603 122 aa-4.17□□□□□ -3.08
LINC00648-203ENST00000556923 TTTY10Q9BZA0 68 aa-4.17□□□□□ -3.08
LINC00648-203ENST00000556923 LYNX1G3V0Z9 82 aa-4.18□□□□□ -3.08
LINC00648-203ENST00000556923 MANBALQ9NQG1 85 aa-4.18□□□□□ -3.08
LINC00648-203ENST00000556923 TEX14Q8IWB6 1497 aa-4.18□□□□□ -3.08
LINC00648-203ENST00000556923 KIF21BO75037 1637 aa-4.19□□□□□ -3.08
LINC00648-203ENST00000556923 KIF20BQ96Q89 1820 aa-4.19□□□□□ -3.08
LINC00648-203ENST00000556923 TRAPPC2P0DI81 140 aa-4.2□□□□□ -3.08
LINC00648-203ENST00000556923 TRAPPC2BP0DI82 140 aa-4.2□□□□□ -3.08
LINC00648-203ENST00000556923 Q0VG73 95 aa-4.2□□□□□ -3.08
LINC00648-203ENST00000556923 NOP10Q9NPE3 64 aaKnown RBP-4.2□□□□□ -3.08
LINC00648-203ENST00000556923 ERVK-7P63135 1459 aa-4.2□□□□□ -3.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms