RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
IFT43-212ENST00000556742 SNRPEP62304 92 aaKnown RBP6.34□□□□□ -1.39
IFT43-212ENST00000556742 HIGD2AQ9BW72 106 aa6.34□□□□□ -1.39
IFT43-212ENST00000556742 SPANXCQ9NY87 97 aa6.34□□□□□ -1.39
IFT43-212ENST00000556742 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
IFT43-212ENST00000556742 EIF4EBP3O60516 100 aaPredicted RBP6.33□□□□□ -1.4
IFT43-212ENST00000556742 S100A6P06703 90 aa6.33□□□□□ -1.4
IFT43-212ENST00000556742 S100A2P29034 98 aa6.33□□□□□ -1.4
IFT43-212ENST00000556742 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
IFT43-212ENST00000556742 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
IFT43-212ENST00000556742 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
IFT43-212ENST00000556742 HIST1H2BLQ99880 126 aa6.33□□□□□ -1.4
IFT43-212ENST00000556742 NPC2P61916 151 aa6.32□□□□□ -1.4
IFT43-212ENST00000556742 KRTAP13-2Q52LG2 175 aa6.32□□□□□ -1.4
IFT43-212ENST00000556742 ANKRD39Q53RE8 183 aa6.32□□□□□ -1.4
IFT43-212ENST00000556742 TTTY13Q9BZ97 58 aa6.32□□□□□ -1.4
IFT43-212ENST00000556742 ANAPC11Q9NYG5 84 aa6.32□□□□□ -1.4
IFT43-212ENST00000556742 CBY1Q9Y3M2 126 aa6.32□□□□□ -1.4
IFT43-212ENST00000556742 ZNF706Q9Y5V0 76 aaPredicted RBP6.32□□□□□ -1.4
IFT43-212ENST00000556742 B5MCH6 92 aa6.31□□□□□ -1.4
IFT43-212ENST00000556742 ATOH7Q8N100 152 aa6.31□□□□□ -1.4
IFT43-212ENST00000556742 SPRR4Q96PI1 79 aa6.31□□□□□ -1.4
IFT43-212ENST00000556742 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
IFT43-212ENST00000556742 PPDPFQ9H3Y8 114 aa6.31□□□□□ -1.4
IFT43-212ENST00000556742 TRAV23DV6A0A075B6W5 121 aa6.3□□□□□ -1.4
IFT43-212ENST00000556742 SCGB1D4Q6XE38 83 aa6.3□□□□□ -1.4
IFT43-212ENST00000556742 Q6ZRX8 168 aa6.3□□□□□ -1.4
IFT43-212ENST00000556742 Q6ZVH6 145 aa6.3□□□□□ -1.4
IFT43-212ENST00000556742 COPS9Q8WXC6 57 aa6.3□□□□□ -1.4
IFT43-212ENST00000556742 KRTAP4-12Q9BQ66 201 aa6.3□□□□□ -1.4
IFT43-212ENST00000556742 CTAG1AP78358 180 aa6.29□□□□□ -1.4
IFT43-212ENST00000556742 LINC00518Q8N0U6 118 aa6.29□□□□□ -1.4
IFT43-212ENST00000556742 SMCR5Q8TEV8 140 aa6.29□□□□□ -1.4
IFT43-212ENST00000556742 ZNF73O43830 326 aaPredicted RBP6.28□□□□□ -1.4
IFT43-212ENST00000556742 IFITM1P13164 125 aa6.28□□□□□ -1.4
IFT43-212ENST00000556742 JOSD1Q15040 202 aaPredicted RBP6.28□□□□□ -1.4
IFT43-212ENST00000556742 C5orf52A6NGY3 159 aa6.27□□□□□ -1.41
IFT43-212ENST00000556742 PCP2Q8IVA1 136 aa6.27□□□□□ -1.41
IFT43-212ENST00000556742 Q9BRP9 147 aa6.27□□□□□ -1.41
IFT43-212ENST00000556742 HINT1P49773 126 aaPredicted RBP6.26□□□□□ -1.41
IFT43-212ENST00000556742 LINC00483Q53H64 154 aa6.26□□□□□ -1.41
IFT43-212ENST00000556742 LINC00304Q8N9R0 145 aa6.26□□□□□ -1.41
IFT43-212ENST00000556742 HSBP1L1C9JCN9 74 aa6.25□□□□□ -1.41
IFT43-212ENST00000556742 OR13C6PQ8NH95 151 aa6.25□□□□□ -1.41
IFT43-212ENST00000556742 LPAP08519 4548 aa6.25□□□□□ -1.41
IFT43-212ENST00000556742 ERC2-IT1O76042 136 aa6.24□□□□□ -1.41
IFT43-212ENST00000556742 TSPAN13O95857 204 aa6.24□□□□□ -1.41
IFT43-212ENST00000556742 C3orf22Q8N5N4 141 aa6.24□□□□□ -1.41
IFT43-212ENST00000556742 RNF213Q63HN8 5207 aa6.23□□□□□ -1.41
IFT43-212ENST00000556742 SPAG11AQ6PDA7 123 aa6.23□□□□□ -1.41
IFT43-212ENST00000556742 PRR4Q16378 134 aa6.22□□□□□ -1.41
IFT43-212ENST00000556742 GAGE2AQ6NT46 116 aa6.22□□□□□ -1.41
IFT43-212ENST00000556742 MUSTN1Q8IVN3 82 aa6.22□□□□□ -1.41
IFT43-212ENST00000556742 TRBV7-6A0A0J9YX20 115 aa6.21□□□□□ -1.42
IFT43-212ENST00000556742 SCGB1D1O95968 90 aa6.21□□□□□ -1.42
IFT43-212ENST00000556742 ELOF1P60002 83 aaKnown RBP6.21□□□□□ -1.42
IFT43-212ENST00000556742 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.42
IFT43-212ENST00000556742 C6orf99Q4VX62 202 aa6.2□□□□□ -1.42
IFT43-212ENST00000556742 TRAV13-2A0A0B4J235 113 aa6.19□□□□□ -1.42
IFT43-212ENST00000556742 COX7BP24311 80 aa6.19□□□□□ -1.42
IFT43-212ENST00000556742 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
IFT43-212ENST00000556742 A6NDN8 102 aa6.18□□□□□ -1.42
IFT43-212ENST00000556742 Q8NBF4 154 aa6.18□□□□□ -1.42
IFT43-212ENST00000556742 A0A1B0GWB2 263 aa6.17□□□□□ -1.42
IFT43-212ENST00000556742 DLEU1O43261 78 aa6.17□□□□□ -1.42
IFT43-212ENST00000556742 SPINK1P00995 79 aa6.17□□□□□ -1.42
IFT43-212ENST00000556742 COX8AP10176 69 aa6.17□□□□□ -1.42
IFT43-212ENST00000556742 SPRR1BP22528 89 aa6.17□□□□□ -1.42
IFT43-212ENST00000556742 IGLV9-49A0A0B4J1Y8 123 aa6.16□□□□□ -1.42
IFT43-212ENST00000556742 A4D1N5 150 aa6.16□□□□□ -1.42
IFT43-212ENST00000556742 RPS29P62273 56 aaKnown RBP6.16□□□□□ -1.42
IFT43-212ENST00000556742 MOBPQ13875 183 aa6.16□□□□□ -1.42
IFT43-212ENST00000556742 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
IFT43-212ENST00000556742 ST20-AS1Q8NBB2 130 aa6.16□□□□□ -1.42
IFT43-212ENST00000556742 SMIM11BQ8TCY0 68 aa6.14□□□□□ -1.43
IFT43-212ENST00000556742 RETNLBQ9BQ08 111 aa6.14□□□□□ -1.43
IFT43-212ENST00000556742 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
IFT43-212ENST00000556742 HIST1H4GQ99525 98 aa6.13□□□□□ -1.43
IFT43-212ENST00000556742 NHP2Q9NX24 153 aaKnown RBP6.13□□□□□ -1.43
IFT43-212ENST00000556742 TPRXLQ17RH7 258 aa6.12□□□□□ -1.43
IFT43-212ENST00000556742 SPATA45Q537H7 98 aa6.12□□□□□ -1.43
IFT43-212ENST00000556742 C9orf153Q5TBE3 101 aa6.12□□□□□ -1.43
IFT43-212ENST00000556742 FP248Q71RG6 208 aaPredicted RBP6.12□□□□□ -1.43
IFT43-212ENST00000556742 VAMP8Q9BV40 100 aa6.12□□□□□ -1.43
IFT43-212ENST00000556742 HIGD1BQ9P298 99 aa6.12□□□□□ -1.43
IFT43-212ENST00000556742 PAM16Q9Y3D7 125 aa6.12□□□□□ -1.43
IFT43-212ENST00000556742 IGLV5-48A0A075B6I7 105 aa6.11□□□□□ -1.43
IFT43-212ENST00000556742 TEX49A0A1B0GTD5 131 aa6.11□□□□□ -1.43
IFT43-212ENST00000556742 VAMP3Q15836 100 aa6.11□□□□□ -1.43
IFT43-212ENST00000556742 TAL2Q16559 108 aa6.11□□□□□ -1.43
IFT43-212ENST00000556742 C14orf144Q96I85 54 aa6.11□□□□□ -1.43
IFT43-212ENST00000556742 LAMTOR3Q9UHA4 124 aa6.11□□□□□ -1.43
IFT43-212ENST00000556742 IGLV7-46A0A075B6I9 117 aa6.1□□□□□ -1.43
IFT43-212ENST00000556742 SLC25A20O43772 301 aa6.09□□□□□ -1.43
IFT43-212ENST00000556742 LINC01547P58512 204 aaPredicted RBP6.09□□□□□ -1.43
IFT43-212ENST00000556742 Q8N377 158 aa6.09□□□□□ -1.43
IFT43-212ENST00000556742 C2orf91Q6ZV80 131 aa6.08□□□□□ -1.44
IFT43-212ENST00000556742 DEFB105AQ8NG35 78 aa6.08□□□□□ -1.44
IFT43-212ENST00000556742 MUC2Q02817 5179 aa6.08□□□□□ -1.44
IFT43-212ENST00000556742 BVES-AS1Q5T3Y7 98 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms