RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 B5MCH6 92 aa6.76□□□□□ -1.33
SLIRP-206ENST00000556375 S100A6P06703 90 aa6.76□□□□□ -1.33
SLIRP-206ENST00000556375 SMCR5Q8TEV8 140 aa6.76□□□□□ -1.33
SLIRP-206ENST00000556375 SNRPEP62304 92 aaKnown RBP6.75□□□□□ -1.33
SLIRP-206ENST00000556375 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
SLIRP-206ENST00000556375 Q6ZRX8 168 aa6.75□□□□□ -1.33
SLIRP-206ENST00000556375 SPANXDQ9BXN6 97 aa6.75□□□□□ -1.33
SLIRP-206ENST00000556375 CBY1Q9Y3M2 126 aa6.75□□□□□ -1.33
SLIRP-206ENST00000556375 ZNF73O43830 326 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-206ENST00000556375 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
SLIRP-206ENST00000556375 C3orf22Q8N5N4 141 aa6.73□□□□□ -1.33
SLIRP-206ENST00000556375 LINC00304Q8N9R0 145 aa6.73□□□□□ -1.33
SLIRP-206ENST00000556375 COPS9Q8WXC6 57 aa6.73□□□□□ -1.33
SLIRP-206ENST00000556375 PPDPFQ9H3Y8 114 aa6.73□□□□□ -1.33
SLIRP-206ENST00000556375 TSPAN13O95857 204 aa6.72□□□□□ -1.33
SLIRP-206ENST00000556375 JOSD1Q15040 202 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-206ENST00000556375 Q6ZVH6 145 aa6.72□□□□□ -1.33
SLIRP-206ENST00000556375 Q9BRP9 147 aa6.72□□□□□ -1.33
SLIRP-206ENST00000556375 LPAP08519 4548 aa6.71□□□□□ -1.33
SLIRP-206ENST00000556375 ERC2-IT1O76042 136 aa6.71□□□□□ -1.34
SLIRP-206ENST00000556375 IFITM1P13164 125 aa6.71□□□□□ -1.34
SLIRP-206ENST00000556375 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
SLIRP-206ENST00000556375 LINC00518Q8N0U6 118 aa6.71□□□□□ -1.34
SLIRP-206ENST00000556375 OR13C6PQ8NH95 151 aa6.71□□□□□ -1.34
SLIRP-206ENST00000556375 HSBP1L1C9JCN9 74 aa6.7□□□□□ -1.34
SLIRP-206ENST00000556375 CTAG1AP78358 180 aa6.7□□□□□ -1.34
SLIRP-206ENST00000556375 PRR4Q16378 134 aa6.7□□□□□ -1.34
SLIRP-206ENST00000556375 C5orf52A6NGY3 159 aa6.69□□□□□ -1.34
SLIRP-206ENST00000556375 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
SLIRP-206ENST00000556375 GAGE2AQ6NT46 116 aa6.68□□□□□ -1.34
SLIRP-206ENST00000556375 SPAG11AQ6PDA7 123 aa6.67□□□□□ -1.34
SLIRP-206ENST00000556375 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
SLIRP-206ENST00000556375 MUSTN1Q8IVN3 82 aa6.66□□□□□ -1.34
SLIRP-206ENST00000556375 SCGB1D1O95968 90 aa6.65□□□□□ -1.34
SLIRP-206ENST00000556375 ELOF1P60002 83 aaKnown RBP6.65□□□□□ -1.34
SLIRP-206ENST00000556375 C6orf99Q4VX62 202 aa6.65□□□□□ -1.34
SLIRP-206ENST00000556375 Q8NBF4 154 aa6.65□□□□□ -1.34
SLIRP-206ENST00000556375 DHRS4-AS1Q9P1J3 65 aa6.65□□□□□ -1.34
SLIRP-206ENST00000556375 COX7BP24311 80 aa6.64□□□□□ -1.35
SLIRP-206ENST00000556375 IGLV9-49A0A0B4J1Y8 123 aa6.63□□□□□ -1.35
SLIRP-206ENST00000556375 TRBV7-6A0A0J9YX20 115 aa6.63□□□□□ -1.35
SLIRP-206ENST00000556375 A6NDN8 102 aa6.63□□□□□ -1.35
SLIRP-206ENST00000556375 MOBPQ13875 183 aa6.63□□□□□ -1.35
SLIRP-206ENST00000556375 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
SLIRP-206ENST00000556375 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
SLIRP-206ENST00000556375 RETNLBQ9BQ08 111 aa6.63□□□□□ -1.35
SLIRP-206ENST00000556375 TRAV13-2A0A0B4J235 113 aa6.62□□□□□ -1.35
SLIRP-206ENST00000556375 SSBP3-AS1Q7Z2R9 100 aa6.62□□□□□ -1.35
SLIRP-206ENST00000556375 A0A1B0GWB2 263 aa6.61□□□□□ -1.35
SLIRP-206ENST00000556375 SPRR1BP22528 89 aa6.61□□□□□ -1.35
SLIRP-206ENST00000556375 SPINK1P00995 79 aa6.6□□□□□ -1.35
SLIRP-206ENST00000556375 COX8AP10176 69 aa6.6□□□□□ -1.35
SLIRP-206ENST00000556375 C9orf153Q5TBE3 101 aa6.6□□□□□ -1.35
SLIRP-206ENST00000556375 SLC25A34Q6PIV7 304 aa6.59□□□□□ -1.35
SLIRP-206ENST00000556375 A4D1N5 150 aa6.58□□□□□ -1.36
SLIRP-206ENST00000556375 DLEU1O43261 78 aa6.58□□□□□ -1.36
SLIRP-206ENST00000556375 RPS29P62273 56 aaKnown RBP6.58□□□□□ -1.36
SLIRP-206ENST00000556375 SMIM11BQ8TCY0 68 aa6.58□□□□□ -1.36
SLIRP-206ENST00000556375 IGLV7-46A0A075B6I9 117 aa6.57□□□□□ -1.36
SLIRP-206ENST00000556375 TPRXLQ17RH7 258 aa6.57□□□□□ -1.36
SLIRP-206ENST00000556375 FP248Q71RG6 208 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-206ENST00000556375 SPATA45Q537H7 98 aa6.56□□□□□ -1.36
SLIRP-206ENST00000556375 HIST1H4GQ99525 98 aa6.56□□□□□ -1.36
SLIRP-206ENST00000556375 VAMP8Q9BV40 100 aa6.56□□□□□ -1.36
SLIRP-206ENST00000556375 NHP2Q9NX24 153 aaKnown RBP6.56□□□□□ -1.36
SLIRP-206ENST00000556375 LAMTOR3Q9UHA4 124 aa6.56□□□□□ -1.36
SLIRP-206ENST00000556375 PAM16Q9Y3D7 125 aa6.56□□□□□ -1.36
SLIRP-206ENST00000556375 TAL2Q16559 108 aa6.55□□□□□ -1.36
SLIRP-206ENST00000556375 IGLV5-48A0A075B6I7 105 aa6.54□□□□□ -1.36
SLIRP-206ENST00000556375 TEX49A0A1B0GTD5 131 aa6.54□□□□□ -1.36
SLIRP-206ENST00000556375 C14orf144Q96I85 54 aa6.54□□□□□ -1.36
SLIRP-206ENST00000556375 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-206ENST00000556375 VAMP3Q15836 100 aa6.53□□□□□ -1.36
SLIRP-206ENST00000556375 Q8N377 158 aa6.53□□□□□ -1.36
SLIRP-206ENST00000556375 DEFB105AQ8NG35 78 aa6.53□□□□□ -1.36
SLIRP-206ENST00000556375 HIGD1BQ9P298 99 aa6.53□□□□□ -1.36
SLIRP-206ENST00000556375 SLC25A20O43772 301 aa6.52□□□□□ -1.37
SLIRP-206ENST00000556375 Q1RN00 199 aa6.52□□□□□ -1.37
SLIRP-206ENST00000556375 C12orf57Q99622 126 aa6.52□□□□□ -1.37
SLIRP-206ENST00000556375 C2orf91Q6ZV80 131 aa6.51□□□□□ -1.37
SLIRP-206ENST00000556375 SMIM29Q86T20 159 aa6.51□□□□□ -1.37
SLIRP-206ENST00000556375 CDIP1Q9H305 208 aa6.51□□□□□ -1.37
SLIRP-206ENST00000556375 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
SLIRP-206ENST00000556375 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
SLIRP-206ENST00000556375 PYY3Q5JQD4 70 aa6.49□□□□□ -1.37
SLIRP-206ENST00000556375 LIMD2Q9BT23 127 aa6.49□□□□□ -1.37
SLIRP-206ENST00000556375 PRO1933Q9H354 126 aa6.49□□□□□ -1.37
SLIRP-206ENST00000556375 KRTAP13-3Q3SY46 172 aa6.48□□□□□ -1.37
SLIRP-206ENST00000556375 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
SLIRP-206ENST00000556375 TMA7Q9Y2S6 64 aaKnown RBP6.48□□□□□ -1.37
SLIRP-206ENST00000556375 MUC2Q02817 5179 aa6.48□□□□□ -1.37
SLIRP-206ENST00000556375 A0A0B4J2C4 111 aa6.47□□□□□ -1.37
SLIRP-206ENST00000556375 hADV29S1A0JD25 119 aa6.47□□□□□ -1.37
SLIRP-206ENST00000556375 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
SLIRP-206ENST00000556375 CFC1P0CG37 223 aa6.47□□□□□ -1.37
SLIRP-206ENST00000556375 CD164Q04900 197 aa6.47□□□□□ -1.37
SLIRP-206ENST00000556375 Q6ZQY7 126 aa6.47□□□□□ -1.37
SLIRP-206ENST00000556375 RAB37Q96AX2 223 aa6.47□□□□□ -1.37
SLIRP-206ENST00000556375 HRCT1Q6UXD1 115 aa6.46□□□□□ -1.38
SLIRP-206ENST00000556375 TMEM238LA0A1B0GVL6 79 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms