RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 VCX2Q9H322 139 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.82□□□□□ -1.96
ATXN3-239ENST00000556315 IGKV2-29A2NJV5 120 aaPredicted RBP2.82□□□□□ -1.96
ATXN3-239ENST00000556315 E9PLD3 99 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 F8VRH5 84 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 H0Y8G0 127 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 H3BUT2 72 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 NMUP48645 174 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 RPL18AQ02543 176 aaKnown RBP2.82□□□□□ -1.96
ATXN3-239ENST00000556315 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 CEND1Q8N111 149 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 TOMM6Q96B49 74 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 TMEM141Q96I45 108 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 SMIM2Q9BVW6 85 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
ATXN3-239ENST00000556315 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
ATXN3-239ENST00000556315 MYMXA0A1B0GTQ4 84 aa2.81□□□□□ -1.96
ATXN3-239ENST00000556315 COX7A2LO14548 114 aa2.81□□□□□ -1.96
ATXN3-239ENST00000556315 ZNF861PO60384 105 aa2.81□□□□□ -1.96
ATXN3-239ENST00000556315 HERVK_113P61574 105 aa2.81□□□□□ -1.96
ATXN3-239ENST00000556315 HERV-K104P63124 156 aa2.81□□□□□ -1.96
ATXN3-239ENST00000556315 TP73-AS1Q9UF72 201 aa2.81□□□□□ -1.96
ATXN3-239ENST00000556315 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 TRBV20-1A0A075B6N2 111 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 TRBV6-5A0A0K0K1A5 114 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 FAM168BA1KXE4 195 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 RPL37AP8A6NKH3 93 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 F8WDY8 70 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 SMKR1H3BMG3 65 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 M0QXV9 152 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 CRYGAP11844 174 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 DSCR10P59022 87 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 UBE2BP63146 152 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 Q6ZVH6 145 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 MTURNQ8N3F0 131 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 TYMSOSQ8TAI1 123 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 TIMM17AQ99595 171 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 CDC42SE2Q9NRR3 84 aa2.8□□□□□ -1.96
ATXN3-239ENST00000556315 SPANXB1Q9NS25 103 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-239ENST00000556315 MRPL35Q9NZE8 188 aaKnown RBP2.8□□□□□ -1.96
ATXN3-239ENST00000556315 CHTOPQ9Y3Y2 248 aaKnown RBP2.8□□□□□ -1.96
ATXN3-239ENST00000556315 SDHAF1A6NFY7 115 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 I3L3M4 83 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 TLX1NBP0CAT3 122 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 FXYD2P54710 66 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-239ENST00000556315 HIST1H4GQ99525 98 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 KIR2DL4Q99706 377 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 RETNLBQ9BQ08 111 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 CYSLTR1Q9Y271 337 aa2.79□□□□□ -1.96
ATXN3-239ENST00000556315 IGKV2D-26A0A0A0MRZ7 120 aa2.78□□□□□ -1.96
ATXN3-239ENST00000556315 TRBV27A0A0K0K1C4 114 aa2.78□□□□□ -1.96
ATXN3-239ENST00000556315 H3BMG7 143 aa2.78□□□□□ -1.96
ATXN3-239ENST00000556315 POLR2KP53803 58 aaKnown RBP2.78□□□□□ -1.96
ATXN3-239ENST00000556315 SPAG11BQ08648 103 aa2.78□□□□□ -1.96
ATXN3-239ENST00000556315 PMVKQ15126 192 aa2.78□□□□□ -1.96
ATXN3-239ENST00000556315 C2orf66Q6UXQ4 117 aa2.78□□□□□ -1.96
ATXN3-239ENST00000556315 C5orf38Q86SI9 138 aa2.78□□□□□ -1.96
ATXN3-239ENST00000556315 RPL39LQ96EH5 51 aaKnown RBP2.78□□□□□ -1.96
ATXN3-239ENST00000556315 SPANXA1Q9NS26 97 aa2.78□□□□□ -1.96
ATXN3-239ENST00000556315 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
ATXN3-239ENST00000556315 IGIPA6NJ69 53 aa2.77□□□□□ -1.97
ATXN3-239ENST00000556315 NDUFA1O15239 70 aa2.77□□□□□ -1.97
ATXN3-239ENST00000556315 SMAGPQ0VAQ4 97 aa2.77□□□□□ -1.97
ATXN3-239ENST00000556315 ASB16-AS1Q495Z4 193 aa2.77□□□□□ -1.97
ATXN3-239ENST00000556315 LINC00337Q8N6G1 96 aa2.77□□□□□ -1.97
ATXN3-239ENST00000556315 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
ATXN3-239ENST00000556315 PLEKHB2Q96CS7 222 aa2.77□□□□□ -1.97
ATXN3-239ENST00000556315 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
ATXN3-239ENST00000556315 PPDPFQ9H3Y8 114 aa2.77□□□□□ -1.97
ATXN3-239ENST00000556315 CSDC2Q9Y534 153 aaKnown RBP2.77□□□□□ -1.97
ATXN3-239ENST00000556315 TRAV13-1A0A0B4J241 112 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 A0A1B0GV72 72 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 ZNF815PA8K554 130 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 TMEM238C9JI98 176 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 LEPROTO15243 131 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 RPL28P46779 137 aaKnown RBP2.76□□□□□ -1.97
ATXN3-239ENST00000556315 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 SCGB1D4Q6XE38 83 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 LINC00304Q8N9R0 145 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 C6orf48Q9UBA6 75 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 PRO0461Q9UI25 63 aa2.76□□□□□ -1.97
ATXN3-239ENST00000556315 A0A0B4J2C4 111 aa2.75□□□□□ -1.97
ATXN3-239ENST00000556315 LINC00242Q5T6M2 205 aa2.75□□□□□ -1.97
ATXN3-239ENST00000556315 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
ATXN3-239ENST00000556315 COPS9Q8WXC6 57 aa2.75□□□□□ -1.97
ATXN3-239ENST00000556315 ANAPC11Q9NYG5 84 aa2.75□□□□□ -1.97
ATXN3-239ENST00000556315 C22orf24Q9Y442 160 aa2.75□□□□□ -1.97
ATXN3-239ENST00000556315 IGHV3OR16-9A0A0B4J2B5 98 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 A0A0J9YXY3 114 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 TRBV30A0A0K0K1B3 111 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
ATXN3-239ENST00000556315 NDUFC2-KCTD14E9PQ53 114 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms