RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 RPL37AP8A6NKH3 93 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 K7ERU9 68 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 M0QXV9 152 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 TAX1BP3O14907 124 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 DPM2O94777 84 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 CXCL5P42830 114 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 HINT1P49773 126 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-237ENST00000556274 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 HSD52Q0P140 79 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 CIRBPQ14011 172 aaKnown RBP2.89□□□□□ -1.95
ATXN3-237ENST00000556274 VAMP3Q15836 100 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 MEIG1Q5JSS6 88 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 NKAPP1Q8N9T2 125 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 HIGD1BQ9P298 99 aa2.89□□□□□ -1.95
ATXN3-237ENST00000556274 SRRM2Q9UQ35 2752 aaKnown RBP2.89□□□□□ -1.95
ATXN3-237ENST00000556274 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
ATXN3-237ENST00000556274 IGKCP01834 107 aa2.88□□□□□ -1.95
ATXN3-237ENST00000556274 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
ATXN3-237ENST00000556274 LGALS3P17931 250 aaKnown RBP2.88□□□□□ -1.95
ATXN3-237ENST00000556274 HERVK_113P61574 105 aa2.88□□□□□ -1.95
ATXN3-237ENST00000556274 TAL2Q16559 108 aa2.88□□□□□ -1.95
ATXN3-237ENST00000556274 C9orf129Q5T035 196 aaKnown RBP2.88□□□□□ -1.95
ATXN3-237ENST00000556274 ERG28Q9UKR5 140 aa2.88□□□□□ -1.95
ATXN3-237ENST00000556274 C22orf24Q9Y442 160 aa2.88□□□□□ -1.95
ATXN3-237ENST00000556274 MYMXA0A1B0GTQ4 84 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 LEPROTO15243 131 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 SMIM13P0DJ93 91 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 PLNP26678 52 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
ATXN3-237ENST00000556274 SRSF9Q13242 221 aaKnown RBP eCLIP2.87□□□□□ -1.95
ATXN3-237ENST00000556274 ATOH7Q8N100 152 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 NDUFA12Q9UI09 145 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 PSORS1C2Q9UIG4 136 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
ATXN3-237ENST00000556274 NPC2P61916 151 aa2.86□□□□□ -1.95
ATXN3-237ENST00000556274 OCIAD2Q56VL3 154 aa2.86□□□□□ -1.95
ATXN3-237ENST00000556274 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
ATXN3-237ENST00000556274 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
ATXN3-237ENST00000556274 LINC00167Q96N53 147 aa2.86□□□□□ -1.95
ATXN3-237ENST00000556274 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
ATXN3-237ENST00000556274 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 DYNC1H1Q14204 4646 aaKnown RBP2.85□□□□□ -1.95
ATXN3-237ENST00000556274 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 J3QQQ9 107 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 J3QR89 54 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 K7EP34 96 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 FABP2P12104 132 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 DSCR10P59022 87 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 HERV-K104P63124 156 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 COX17Q14061 63 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 SFTA2Q6UW10 78 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 REG3GQ6UW15 175 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 SPINK6Q6UWN8 80 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 MRPL55Q7Z7F7 128 aaKnown RBP2.85□□□□□ -1.95
ATXN3-237ENST00000556274 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 MIR7-3HGQ8N6C7 128 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 DAND5Q8N907 189 aa2.85□□□□□ -1.95
ATXN3-237ENST00000556274 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
ATXN3-237ENST00000556274 F8W1H4 67 aa2.84□□□□□ -1.95
ATXN3-237ENST00000556274 NCR3O14931 201 aa2.84□□□□□ -1.95
ATXN3-237ENST00000556274 OXTP01178 125 aa2.84□□□□□ -1.95
ATXN3-237ENST00000556274 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
ATXN3-237ENST00000556274 UBE2AP49459 152 aa2.84□□□□□ -1.95
ATXN3-237ENST00000556274 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.95
ATXN3-237ENST00000556274 Q8N377 158 aa2.84□□□□□ -1.95
ATXN3-237ENST00000556274 DIRC1Q969H9 104 aa2.84□□□□□ -1.95
ATXN3-237ENST00000556274 DNAH5Q8TE73 4624 aa2.83□□□□□ -1.96
ATXN3-237ENST00000556274 A0A1B0GWB2 263 aa2.83□□□□□ -1.96
ATXN3-237ENST00000556274 ZNF815PA8K554 130 aa2.83□□□□□ -1.96
ATXN3-237ENST00000556274 NMUP48645 174 aa2.83□□□□□ -1.96
ATXN3-237ENST00000556274 TSPEAR-AS2P59090 65 aa2.83□□□□□ -1.96
ATXN3-237ENST00000556274 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
ATXN3-237ENST00000556274 FAM19A1Q7Z5A9 133 aa2.83□□□□□ -1.96
ATXN3-237ENST00000556274 OR13C6PQ8NH95 151 aa2.83□□□□□ -1.96
ATXN3-237ENST00000556274 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
ATXN3-237ENST00000556274 TMEM238C9JI98 176 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 E9PLD3 99 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 H3BUT2 72 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 M0R378 163 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 RPL28P46779 137 aaKnown RBP2.82□□□□□ -1.96
ATXN3-237ENST00000556274 S100A7L2Q5SY68 101 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 SCGB1D4Q6XE38 83 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 CEND1Q8N111 149 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 TTTY13Q9BZ97 58 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 TP73-AS1Q9UF72 201 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 LRP1BQ9NZR2 4599 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 HSPG2P98160 4391 aa2.82□□□□□ -1.96
ATXN3-237ENST00000556274 IGLV1-50A0A075B6I6 118 aa2.81□□□□□ -1.96
ATXN3-237ENST00000556274 IGKV2D-26A0A0A0MRZ7 120 aa2.81□□□□□ -1.96
ATXN3-237ENST00000556274 A0A0J9YXY3 114 aa2.81□□□□□ -1.96
ATXN3-237ENST00000556274 ZNF861PO60384 105 aa2.81□□□□□ -1.96
ATXN3-237ENST00000556274 BCE1O60756 84 aa2.81□□□□□ -1.96
ATXN3-237ENST00000556274 PRLHP81277 87 aa2.81□□□□□ -1.96
ATXN3-237ENST00000556274 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms