RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 TSC22D3Q99576 134 aa1.29□□□□□ -2.2
EFCAB11-210ENST00000556078 TRAV30A0A087WSZ9 112 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 C9orf92A6NGG3 77 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 C9JAW5 83 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 DNAL4O96015 105 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 COX4I1P13073 169 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 RHOHQ15669 191 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 CCDC58Q4VC31 144 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 CFAP126Q5VTH2 177 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 C12orf73Q69YU5 71 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 PATE2Q6UY27 113 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 ZNF818PQ6ZRF7 136 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 TEN1Q86WV5 123 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 ZNF625Q96I27 306 aaPredicted RBP1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 COPZ2Q9P299 210 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 HSPB8Q9UJY1 196 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 HIGD1AQ9Y241 93 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 SNURFQ9Y675 71 aa1.28□□□□□ -2.2
EFCAB11-210ENST00000556078 LOC107984156A0A0G2JMH3 177 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 TRBV27A0A0K0K1C4 114 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 A0A1B0GX51 115 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 TMEM262E9PQX1 116 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 SNAPC5O75971 98 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 MT-ND4LP03901 98 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 SLC25A5P05141 298 aaKnown RBP1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 ROMO1P60602 79 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 RPS28P62857 69 aaKnown RBP1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 HSD17B12Q53GQ0 312 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 ARL17AQ8IVW1 177 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 ZCCHC13Q8WW36 166 aaKnown RBP1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 CLEC2BQ92478 149 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 NAA38Q9BRA0 125 aaKnown RBP1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 SMIM3Q9BZL3 60 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 NIT2Q9NQR4 276 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 LINC00474Q9P2X8 69 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 UBE2D4Q9Y2X8 147 aa1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
EFCAB11-210ENST00000556078 TRBV7-6A0A0J9YX20 115 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 C3orf85A0A1B0GTC6 90 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 F8W1H4 67 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 J3QR89 54 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 SNCAP37840 140 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 PDE6HQ13956 83 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 ARPINQ7Z6K5 226 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 PFDN5Q99471 154 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 CDC42SE1Q9NRR8 79 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 FKBP11Q9NYL4 201 aa1.26□□□□□ -2.21
EFCAB11-210ENST00000556078 A0A087WWC5 75 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 GVQW2A0A096LPI5 108 aaPredicted RBP1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 C9orf170A2RU37 121 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 H3BRM9 83 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 M0R2P5 195 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 TRACP01848 142 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 TCRAP04437 139 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 FXYD4P59646 89 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 TMEM14EPQ6UXP3 125 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 CASC2Q6XLA1 102 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 ODF3Q96PU9 254 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 AGPAT4-IT1Q9H0P7 198 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 ORMDL1Q9P0S3 153 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
EFCAB11-210ENST00000556078 IGKV2-29A2NJV5 120 aaPredicted RBP1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 RBAKDNA6NC62 111 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 CRYM-AS1A6NIL9 109 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 BBIP1A8MTZ0 92 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 K7ERU9 68 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 M0R3E3 92 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 CORTO00230 105 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 PPYP01298 95 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 CKS2P33552 79 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 FOXA3P55318 350 aaPredicted RBP1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 KRTAP8-1Q8IUC2 63 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 ACBD7Q8N6N7 88 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 VPS25Q9BRG1 176 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 SAR1AQ9NR31 198 aa1.24□□□□□ -2.21
EFCAB11-210ENST00000556078 IGKV2-40A0A087WW87 121 aaPredicted RBP1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 IGKV3D-7A0A0C4DH55 119 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 IGKV3OR2-268A0A0C4DH90 116 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 H3BQ15 152 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 UQCRQO14949 82 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 EDF1O60869 148 aaKnown RBP1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 IGKV2D-40P01614 121 aaPredicted RBP1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 HBDP02042 147 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 SLC25A4P12235 298 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 NCS1P62166 190 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 CATR1Q13166 79 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 NEDD8Q15843 81 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 SMIM7Q9BQ49 75 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 NPVFQ9HCQ7 196 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 MED9Q9NWA0 146 aa1.23□□□□□ -2.21
EFCAB11-210ENST00000556078 A0A0G2JND7 137 aa1.22□□□□□ -2.21
EFCAB11-210ENST00000556078 SNRPGP15A8MWD9 76 aa1.22□□□□□ -2.21
EFCAB11-210ENST00000556078 ARL14EPLP0DKL9 152 aa1.22□□□□□ -2.21
EFCAB11-210ENST00000556078 COX7CP15954 63 aa1.22□□□□□ -2.21
EFCAB11-210ENST00000556078 HIST1H1DP16402 221 aaKnown RBP1.22□□□□□ -2.21
EFCAB11-210ENST00000556078 UBE2D3P61077 147 aa1.22□□□□□ -2.21
EFCAB11-210ENST00000556078 UBE2D2P62837 147 aa1.22□□□□□ -2.21
EFCAB11-210ENST00000556078 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
EFCAB11-210ENST00000556078 IGHV1-24A0A0C4DH33 117 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms