RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 SCGB1D4Q6XE38 83 aa9.36□□□□□ -0.91
CHGA-204ENST00000556076 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
CHGA-204ENST00000556076 COPS9Q8WXC6 57 aa9.36□□□□□ -0.91
CHGA-204ENST00000556076 MUC2Q02817 5179 aa9.35□□□□□ -0.91
CHGA-204ENST00000556076 ANKRD39Q53RE8 183 aa9.35□□□□□ -0.91
CHGA-204ENST00000556076 SPRR4Q96PI1 79 aa9.35□□□□□ -0.91
CHGA-204ENST00000556076 TTTY13Q9BZ97 58 aa9.35□□□□□ -0.91
CHGA-204ENST00000556076 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
CHGA-204ENST00000556076 IGLV6-57P01721 117 aa9.34□□□□□ -0.91
CHGA-204ENST00000556076 HSBP1L1C9JCN9 74 aa9.33□□□□□ -0.92
CHGA-204ENST00000556076 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
CHGA-204ENST00000556076 SPANXDQ9BXN6 97 aa9.33□□□□□ -0.92
CHGA-204ENST00000556076 PPDPFQ9H3Y8 114 aa9.33□□□□□ -0.92
CHGA-204ENST00000556076 ZNF706Q9Y5V0 76 aaPredicted RBP9.33□□□□□ -0.92
CHGA-204ENST00000556076 EIF4EBP3O60516 100 aaPredicted RBP9.32□□□□□ -0.92
CHGA-204ENST00000556076 Q6ZVH6 145 aa9.32□□□□□ -0.92
CHGA-204ENST00000556076 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
CHGA-204ENST00000556076 IFITM1P13164 125 aa9.31□□□□□ -0.92
CHGA-204ENST00000556076 SMCR5Q8TEV8 140 aa9.31□□□□□ -0.92
CHGA-204ENST00000556076 TRAV23DV6A0A075B6W5 121 aa9.3□□□□□ -0.92
CHGA-204ENST00000556076 C5orf52A6NGY3 159 aa9.3□□□□□ -0.92
CHGA-204ENST00000556076 B5MCH6 92 aa9.29□□□□□ -0.92
CHGA-204ENST00000556076 ERC2-IT1O76042 136 aa9.29□□□□□ -0.92
CHGA-204ENST00000556076 HINT1P49773 126 aaPredicted RBP9.29□□□□□ -0.92
CHGA-204ENST00000556076 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
CHGA-204ENST00000556076 PCP2Q8IVA1 136 aa9.28□□□□□ -0.92
CHGA-204ENST00000556076 OR13C6PQ8NH95 151 aa9.28□□□□□ -0.92
CHGA-204ENST00000556076 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.93
CHGA-204ENST00000556076 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
CHGA-204ENST00000556076 Q6ZRX8 168 aa9.26□□□□□ -0.93
CHGA-204ENST00000556076 Q8NBF4 154 aa9.25□□□□□ -0.93
CHGA-204ENST00000556076 Q9BRP9 147 aa9.25□□□□□ -0.93
CHGA-204ENST00000556076 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
CHGA-204ENST00000556076 GAGE2AQ6NT46 116 aa9.24□□□□□ -0.93
CHGA-204ENST00000556076 MUSTN1Q8IVN3 82 aa9.23□□□□□ -0.93
CHGA-204ENST00000556076 CTAG1AP78358 180 aa9.22□□□□□ -0.93
CHGA-204ENST00000556076 IGLV9-49A0A0B4J1Y8 123 aa9.2□□□□□ -0.94
CHGA-204ENST00000556076 LINC00483Q53H64 154 aa9.2□□□□□ -0.94
CHGA-204ENST00000556076 CDIP1Q9H305 208 aa9.2□□□□□ -0.94
CHGA-204ENST00000556076 MOBPQ13875 183 aa9.19□□□□□ -0.94
CHGA-204ENST00000556076 TRAV13-2A0A0B4J235 113 aa9.18□□□□□ -0.94
CHGA-204ENST00000556076 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
CHGA-204ENST00000556076 DHRS4-AS1Q9P1J3 65 aa9.18□□□□□ -0.94
CHGA-204ENST00000556076 A6NDN8 102 aa9.17□□□□□ -0.94
CHGA-204ENST00000556076 C4orf48Q5BLP8 95 aa9.17□□□□□ -0.94
CHGA-204ENST00000556076 SPAG11AQ6PDA7 123 aa9.17□□□□□ -0.94
CHGA-204ENST00000556076 ST20-AS1Q8NBB2 130 aa9.17□□□□□ -0.94
CHGA-204ENST00000556076 TRBV7-6A0A0J9YX20 115 aa9.16□□□□□ -0.94
CHGA-204ENST00000556076 COX8AP10176 69 aa9.16□□□□□ -0.94
CHGA-204ENST00000556076 COX7BP24311 80 aa9.16□□□□□ -0.94
CHGA-204ENST00000556076 C6orf99Q4VX62 202 aa9.16□□□□□ -0.94
CHGA-204ENST00000556076 ELOF1P60002 83 aaKnown RBP9.15□□□□□ -0.94
CHGA-204ENST00000556076 MUC17Q685J3 4493 aa9.15□□□□□ -0.94
CHGA-204ENST00000556076 DLEU1O43261 78 aa9.14□□□□□ -0.95
CHGA-204ENST00000556076 A0A1B0GWB2 263 aa9.13□□□□□ -0.95
CHGA-204ENST00000556076 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
CHGA-204ENST00000556076 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
CHGA-204ENST00000556076 A4D1N5 150 aa9.11□□□□□ -0.95
CHGA-204ENST00000556076 SPATA45Q537H7 98 aa9.11□□□□□ -0.95
CHGA-204ENST00000556076 SLC25A34Q6PIV7 304 aa9.11□□□□□ -0.95
CHGA-204ENST00000556076 HIST1H4GQ99525 98 aa9.11□□□□□ -0.95
CHGA-204ENST00000556076 SPINK1P00995 79 aa9.1□□□□□ -0.95
CHGA-204ENST00000556076 PAM16Q9Y3D7 125 aa9.1□□□□□ -0.95
CHGA-204ENST00000556076 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
CHGA-204ENST00000556076 FAT4Q6V0I7 4981 aa9.09□□□□□ -0.95
CHGA-204ENST00000556076 SPRR1BP22528 89 aa9.08□□□□□ -0.96
CHGA-204ENST00000556076 VAMP3Q15836 100 aa9.08□□□□□ -0.96
CHGA-204ENST00000556076 C9orf153Q5TBE3 101 aa9.08□□□□□ -0.96
CHGA-204ENST00000556076 FP248Q71RG6 208 aaPredicted RBP9.08□□□□□ -0.96
CHGA-204ENST00000556076 Q8N377 158 aa9.08□□□□□ -0.96
CHGA-204ENST00000556076 SMIM11BQ8TCY0 68 aa9.08□□□□□ -0.96
CHGA-204ENST00000556076 NHP2Q9NX24 153 aaKnown RBP9.08□□□□□ -0.96
CHGA-204ENST00000556076 C14orf144Q96I85 54 aa9.07□□□□□ -0.96
CHGA-204ENST00000556076 HIGD1BQ9P298 99 aa9.07□□□□□ -0.96
CHGA-204ENST00000556076 TAL2Q16559 108 aa9.06□□□□□ -0.96
CHGA-204ENST00000556076 LAMTOR3Q9UHA4 124 aa9.05□□□□□ -0.96
CHGA-204ENST00000556076 A0A0U1RQV1 116 aa9.04□□□□□ -0.96
CHGA-204ENST00000556076 SLC25A20O43772 301 aa9.04□□□□□ -0.96
CHGA-204ENST00000556076 TEX49A0A1B0GTD5 131 aa9.03□□□□□ -0.96
CHGA-204ENST00000556076 LCE2AQ5TA79 106 aaPredicted RBP9.03□□□□□ -0.96
CHGA-204ENST00000556076 TMA7Q9Y2S6 64 aaKnown RBP9.03□□□□□ -0.96
CHGA-204ENST00000556076 RPS29P62273 56 aaKnown RBP9.02□□□□□ -0.97
CHGA-204ENST00000556076 HRCT1Q6UXD1 115 aa9.02□□□□□ -0.97
CHGA-204ENST00000556076 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
CHGA-204ENST00000556076 DEFB105AQ8NG35 78 aa9.01□□□□□ -0.97
CHGA-204ENST00000556076 PYY3Q5JQD4 70 aa9□□□□□ -0.97
CHGA-204ENST00000556076 BVES-AS1Q5T3Y7 98 aa8.99□□□□□ -0.97
CHGA-204ENST00000556076 RAB37Q96AX2 223 aa8.99□□□□□ -0.97
CHGA-204ENST00000556076 C12orf57Q99622 126 aa8.99□□□□□ -0.97
CHGA-204ENST00000556076 IGLV5-48A0A075B6I7 105 aa8.98□□□□□ -0.97
CHGA-204ENST00000556076 Q1RN00 199 aa8.98□□□□□ -0.97
CHGA-204ENST00000556076 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
CHGA-204ENST00000556076 C2orf91Q6ZV80 131 aa8.98□□□□□ -0.97
CHGA-204ENST00000556076 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
CHGA-204ENST00000556076 A6NJY4 79 aa8.97□□□□□ -0.97
CHGA-204ENST00000556076 CFC1BP0CG36 223 aa8.97□□□□□ -0.97
CHGA-204ENST00000556076 CFC1P0CG37 223 aa8.97□□□□□ -0.97
CHGA-204ENST00000556076 A0A0B4J2C4 111 aa8.96□□□□□ -0.98
CHGA-204ENST00000556076 hADV29S1A0JD25 119 aa8.96□□□□□ -0.98
CHGA-204ENST00000556076 ASB16-AS1Q495Z4 193 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms