RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 SYS1-DBNDD2H3BUS1 97 aa8.78□□□□□ -1
SNX6-205ENST00000555648 ZNF73O43830 326 aaPredicted RBP8.78□□□□□ -1
SNX6-205ENST00000555648 Q9BRP9 147 aa8.78□□□□□ -1
SNX6-205ENST00000555648 C9orf153Q5TBE3 101 aa8.77□□□□□ -1.01
SNX6-205ENST00000555648 OR13C6PQ8NH95 151 aa8.77□□□□□ -1.01
SNX6-205ENST00000555648 ADAMTSL4-AS1Q5T5F5 129 aa8.76□□□□□ -1.01
SNX6-205ENST00000555648 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
SNX6-205ENST00000555648 PET117Q6UWS5 81 aa8.74□□□□□ -1.01
SNX6-205ENST00000555648 SPANXCQ9NY87 97 aa8.74□□□□□ -1.01
SNX6-205ENST00000555648 ZNF815PA8K554 130 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST1H2BKO60814 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST1H2BJP06899 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST1H2BOP23527 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST1H2BBP33778 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST1H2BDP58876 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 RPS29P62273 56 aaKnown RBP8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST1H2BCP62807 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST2H2BEQ16778 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.73□□□□□ -1.01
SNX6-205ENST00000555648 LINC00308Q8TCZ7 52 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST1H2BHQ93079 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST1H2BNQ99877 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 HIST1H2BMQ99879 126 aa8.73□□□□□ -1.01
SNX6-205ENST00000555648 SLC25A20O43772 301 aa8.72□□□□□ -1.01
SNX6-205ENST00000555648 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
SNX6-205ENST00000555648 TIMM17BO60830 172 aa8.72□□□□□ -1.01
SNX6-205ENST00000555648 LINC01545Q5VT33 79 aa8.72□□□□□ -1.01
SNX6-205ENST00000555648 C5orf52A6NGY3 159 aa8.71□□□□□ -1.02
SNX6-205ENST00000555648 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.02
SNX6-205ENST00000555648 SLC25A34Q6PIV7 304 aa8.71□□□□□ -1.02
SNX6-205ENST00000555648 MUC2Q02817 5179 aa8.7□□□□□ -1.02
SNX6-205ENST00000555648 ST20-AS1Q8NBB2 130 aa8.7□□□□□ -1.02
SNX6-205ENST00000555648 SPANXDQ9BXN6 97 aa8.7□□□□□ -1.02
SNX6-205ENST00000555648 DHRS4-AS1Q9P1J3 65 aa8.7□□□□□ -1.02
SNX6-205ENST00000555648 LINC00518Q8N0U6 118 aa8.69□□□□□ -1.02
SNX6-205ENST00000555648 Q8N377 158 aa8.69□□□□□ -1.02
SNX6-205ENST00000555648 KRTDAPP60985 99 aa8.68□□□□□ -1.02
SNX6-205ENST00000555648 SCGB1D4Q6XE38 83 aa8.68□□□□□ -1.02
SNX6-205ENST00000555648 LITAFQ99732 161 aa8.68□□□□□ -1.02
SNX6-205ENST00000555648 C20orf202A1L168 122 aa8.67□□□□□ -1.02
SNX6-205ENST00000555648 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
SNX6-205ENST00000555648 COPS9Q8WXC6 57 aa8.67□□□□□ -1.02
SNX6-205ENST00000555648 C3orf79P0CE67 100 aa8.66□□□□□ -1.02
SNX6-205ENST00000555648 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
SNX6-205ENST00000555648 LAMTOR3Q9UHA4 124 aa8.66□□□□□ -1.02
SNX6-205ENST00000555648 COX7BP24311 80 aa8.65□□□□□ -1.02
SNX6-205ENST00000555648 TAL2Q16559 108 aa8.64□□□□□ -1.03
SNX6-205ENST00000555648 ASB16-AS1Q495Z4 193 aa8.64□□□□□ -1.03
SNX6-205ENST00000555648 TTTY13Q9BZ97 58 aa8.64□□□□□ -1.03
SNX6-205ENST00000555648 C6orf99Q4VX62 202 aa8.63□□□□□ -1.03
SNX6-205ENST00000555648 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
SNX6-205ENST00000555648 SPRR1BP22528 89 aa8.62□□□□□ -1.03
SNX6-205ENST00000555648 HRCT1Q6UXD1 115 aa8.62□□□□□ -1.03
SNX6-205ENST00000555648 DEFB105AQ8NG35 78 aa8.62□□□□□ -1.03
SNX6-205ENST00000555648 ELOF1P60002 83 aaKnown RBP8.61□□□□□ -1.03
SNX6-205ENST00000555648 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
SNX6-205ENST00000555648 A6NDN8 102 aa8.6□□□□□ -1.03
SNX6-205ENST00000555648 IFITM1P13164 125 aa8.6□□□□□ -1.03
SNX6-205ENST00000555648 AKR1D1P51857 326 aa8.6□□□□□ -1.03
SNX6-205ENST00000555648 COA6Q5JTJ3 125 aaKnown RBP8.6□□□□□ -1.03
SNX6-205ENST00000555648 Q6ZVH6 145 aa8.58□□□□□ -1.04
SNX6-205ENST00000555648 TRBV7-6A0A0J9YX20 115 aa8.57□□□□□ -1.04
SNX6-205ENST00000555648 TEX49A0A1B0GTD5 131 aa8.57□□□□□ -1.04
SNX6-205ENST00000555648 A0A1B0GWB2 263 aa8.57□□□□□ -1.04
SNX6-205ENST00000555648 Q1RN00 199 aa8.57□□□□□ -1.04
SNX6-205ENST00000555648 ATOH7Q8N100 152 aa8.57□□□□□ -1.04
SNX6-205ENST00000555648 LINC01547P58512 204 aaPredicted RBP8.56□□□□□ -1.04
SNX6-205ENST00000555648 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
SNX6-205ENST00000555648 PRO1933Q9H354 126 aa8.56□□□□□ -1.04
SNX6-205ENST00000555648 MUC17Q685J3 4493 aa8.54□□□□□ -1.04
SNX6-205ENST00000555648 XP32Q5T750 250 aa8.54□□□□□ -1.04
SNX6-205ENST00000555648 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
SNX6-205ENST00000555648 KRTAP9-2Q9BYQ4 174 aa8.54□□□□□ -1.04
SNX6-205ENST00000555648 TRAV13-2A0A0B4J235 113 aa8.53□□□□□ -1.04
SNX6-205ENST00000555648 A4D1N5 150 aa8.53□□□□□ -1.04
SNX6-205ENST00000555648 H7C2G1 150 aa8.53□□□□□ -1.04
SNX6-205ENST00000555648 NHP2Q9NX24 153 aaKnown RBP8.53□□□□□ -1.04
SNX6-205ENST00000555648 SNRPEP62304 92 aaKnown RBP8.52□□□□□ -1.05
SNX6-205ENST00000555648 CD164Q04900 197 aa8.52□□□□□ -1.05
SNX6-205ENST00000555648 PCP2Q8IVA1 136 aa8.52□□□□□ -1.05
SNX6-205ENST00000555648 C9orf92A6NGG3 77 aa8.49□□□□□ -1.05
SNX6-205ENST00000555648 HSBP1L1C9JCN9 74 aa8.49□□□□□ -1.05
SNX6-205ENST00000555648 S100A2P29034 98 aa8.49□□□□□ -1.05
SNX6-205ENST00000555648 VAMP3Q15836 100 aa8.49□□□□□ -1.05
SNX6-205ENST00000555648 FAT4Q6V0I7 4981 aa8.48□□□□□ -1.05
SNX6-205ENST00000555648 SMIM11BQ8TCY0 68 aa8.47□□□□□ -1.05
SNX6-205ENST00000555648 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
SNX6-205ENST00000555648 IGLV5-48A0A075B6I7 105 aa8.46□□□□□ -1.06
SNX6-205ENST00000555648 F8WEM9 126 aa8.46□□□□□ -1.06
SNX6-205ENST00000555648 SMIM29Q86T20 159 aa8.45□□□□□ -1.06
SNX6-205ENST00000555648 PCOTHQ58A44 107 aa8.43□□□□□ -1.06
SNX6-205ENST00000555648 Q5XG85 94 aa8.43□□□□□ -1.06
SNX6-205ENST00000555648 IGLV8-61A0A075B6I0 122 aa8.42□□□□□ -1.06
SNX6-205ENST00000555648 TCL1BO95988 128 aa8.42□□□□□ -1.06
SNX6-205ENST00000555648 S100A6P06703 90 aa8.41□□□□□ -1.06
SNX6-205ENST00000555648 HIST3H2BBQ8N257 126 aa8.41□□□□□ -1.06
SNX6-205ENST00000555648 A0A0G2JQZ4 141 aa8.4□□□□□ -1.06
SNX6-205ENST00000555648 C1orf195Q5TG92 126 aa8.4□□□□□ -1.06
SNX6-205ENST00000555648 HIST1H2BLQ99880 126 aa8.4□□□□□ -1.06
SNX6-205ENST00000555648 hADV29S1A0JD25 119 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms