RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 X6R8D5 127 aa5.93□□□□□ -1.46
SYNE2-217ENST00000555022 LOC110117498A0A087WWA1 95 aa5.93□□□□□ -1.46
SYNE2-217ENST00000555022 FSHBP01225 129 aa5.93□□□□□ -1.46
SYNE2-217ENST00000555022 A8MU10 97 aa5.92□□□□□ -1.46
SYNE2-217ENST00000555022 WFDC10BQ8IUB3 73 aa5.92□□□□□ -1.46
SYNE2-217ENST00000555022 LINC00612Q8N6U2 182 aa5.92□□□□□ -1.46
SYNE2-217ENST00000555022 IGLV6-57P01721 117 aa5.92□□□□□ -1.46
SYNE2-217ENST00000555022 IGKV4-1P06312 121 aa5.92□□□□□ -1.46
SYNE2-217ENST00000555022 DEFB113Q30KQ7 82 aa5.92□□□□□ -1.46
SYNE2-217ENST00000555022 Q6ZRU5 148 aa5.92□□□□□ -1.46
SYNE2-217ENST00000555022 FBN1P35555 2871 aaKnown RBP5.92□□□□□ -1.46
SYNE2-217ENST00000555022 A0A1B0GUV1 79 aa5.91□□□□□ -1.46
SYNE2-217ENST00000555022 ST20-AS1Q8NBB2 130 aa5.91□□□□□ -1.46
SYNE2-217ENST00000555022 WFDC13Q8IUB5 93 aa5.9□□□□□ -1.46
SYNE2-217ENST00000555022 IGKV2D-24A0A075B6R9 120 aa5.9□□□□□ -1.46
SYNE2-217ENST00000555022 A0A0J9YWU9 116 aa5.9□□□□□ -1.46
SYNE2-217ENST00000555022 CXCL6P80162 114 aa5.9□□□□□ -1.47
SYNE2-217ENST00000555022 COX17Q14061 63 aa5.9□□□□□ -1.47
SYNE2-217ENST00000555022 ESRGQ1W209 222 aa5.89□□□□□ -1.47
SYNE2-217ENST00000555022 TENM4Q6N022 2769 aa5.89□□□□□ -1.47
SYNE2-217ENST00000555022 FAM168BA1KXE4 195 aa5.88□□□□□ -1.47
SYNE2-217ENST00000555022 STAB1Q9NY15 2570 aa5.88□□□□□ -1.47
SYNE2-217ENST00000555022 EPM2AB3EWF7 344 aa5.87□□□□□ -1.47
SYNE2-217ENST00000555022 NKAPP1Q8N9T2 125 aa5.87□□□□□ -1.47
SYNE2-217ENST00000555022 CSMD3Q7Z407 3707 aa5.87□□□□□ -1.47
SYNE2-217ENST00000555022 A0A096LNI7 61 aa5.87□□□□□ -1.47
SYNE2-217ENST00000555022 NSD1Q96L73 2696 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-217ENST00000555022 ELOF1P60002 83 aaKnown RBP5.86□□□□□ -1.47
SYNE2-217ENST00000555022 KRTAP10-3P60369 221 aa5.86□□□□□ -1.47
SYNE2-217ENST00000555022 OTOGQ6ZRI0 2925 aa5.86□□□□□ -1.47
SYNE2-217ENST00000555022 VPREB1P12018 145 aa5.86□□□□□ -1.47
SYNE2-217ENST00000555022 SERTAD4-AS1Q5TG53 156 aa5.86□□□□□ -1.47
SYNE2-217ENST00000555022 Q6ZRP5 223 aa5.86□□□□□ -1.47
SYNE2-217ENST00000555022 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
SYNE2-217ENST00000555022 K7EQZ3 153 aa5.85□□□□□ -1.47
SYNE2-217ENST00000555022 C1orf64Q8NEQ6 169 aa5.85□□□□□ -1.47
SYNE2-217ENST00000555022 RPL37AP61513 92 aaKnown RBP5.84□□□□□ -1.47
SYNE2-217ENST00000555022 C9orf66Q5T8R8 295 aa5.84□□□□□ -1.47
SYNE2-217ENST00000555022 PDE6GP18545 87 aa5.84□□□□□ -1.47
SYNE2-217ENST00000555022 UBE2BP63146 152 aa5.84□□□□□ -1.47
SYNE2-217ENST00000555022 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
SYNE2-217ENST00000555022 A8MUN3 132 aa5.84□□□□□ -1.48
SYNE2-217ENST00000555022 NDUFC1O43677 76 aa5.83□□□□□ -1.48
SYNE2-217ENST00000555022 KPRPQ5T749 579 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-217ENST00000555022 Q6ZTC4 211 aa5.83□□□□□ -1.48
SYNE2-217ENST00000555022 LINC00528Q8N1L1 170 aa5.83□□□□□ -1.48
SYNE2-217ENST00000555022 Q8N377 158 aa5.83□□□□□ -1.48
SYNE2-217ENST00000555022 M0R378 163 aa5.83□□□□□ -1.48
SYNE2-217ENST00000555022 IGHV4-30-4P0DP06 118 aa5.83□□□□□ -1.48
SYNE2-217ENST00000555022 A0A1W2PNM2 257 aa5.82□□□□□ -1.48
SYNE2-217ENST00000555022 ERC2-IT1O76042 136 aa5.82□□□□□ -1.48
SYNE2-217ENST00000555022 C1orf137Q5JT78 98 aa5.82□□□□□ -1.48
SYNE2-217ENST00000555022 C7orf33Q8WU49 177 aa5.82□□□□□ -1.48
SYNE2-217ENST00000555022 CMC4P56277 68 aaPredicted RBP5.82□□□□□ -1.48
SYNE2-217ENST00000555022 PMAIP1Q13794 54 aa5.82□□□□□ -1.48
SYNE2-217ENST00000555022 LELP1Q5T871 98 aa5.82□□□□□ -1.48
SYNE2-217ENST00000555022 MRPL55Q7Z7F7 128 aaKnown RBP5.82□□□□□ -1.48
SYNE2-217ENST00000555022 KRTAP1-3Q8IUG1 177 aa5.81□□□□□ -1.48
SYNE2-217ENST00000555022 COL7A1Q02388 2944 aa5.81□□□□□ -1.48
SYNE2-217ENST00000555022 SPART-AS1P0CW21 52 aa5.81□□□□□ -1.48
SYNE2-217ENST00000555022 ETDCA0A1B0GVM5 59 aa5.8□□□□□ -1.48
SYNE2-217ENST00000555022 CASC10Q5T4H9 136 aa5.8□□□□□ -1.48
SYNE2-217ENST00000555022 LYRM9A8MSI8 78 aa5.8□□□□□ -1.48
SYNE2-217ENST00000555022 C15orf56Q8N910 161 aa5.8□□□□□ -1.48
SYNE2-217ENST00000555022 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
SYNE2-217ENST00000555022 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.79□□□□□ -1.48
SYNE2-217ENST00000555022 IGKV2-24A0A0C4DH68 120 aa5.79□□□□□ -1.48
SYNE2-217ENST00000555022 MGAM2Q2M2H8 2515 aa5.78□□□□□ -1.48
SYNE2-217ENST00000555022 TRAV22A0A0B4J277 110 aa5.78□□□□□ -1.48
SYNE2-217ENST00000555022 hDV103S1A0JD37 113 aa5.78□□□□□ -1.48
SYNE2-217ENST00000555022 SYCNQ0VAF6 134 aa5.78□□□□□ -1.48
SYNE2-217ENST00000555022 Q8NAQ8 132 aa5.78□□□□□ -1.48
SYNE2-217ENST00000555022 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-217ENST00000555022 PRLHP81277 87 aa5.77□□□□□ -1.49
SYNE2-217ENST00000555022 Q9BRP9 147 aa5.77□□□□□ -1.49
SYNE2-217ENST00000555022 BCE1O60756 84 aa5.76□□□□□ -1.49
SYNE2-217ENST00000555022 TENM2Q9NT68 2774 aa5.76□□□□□ -1.49
SYNE2-217ENST00000555022 CHKB-CPT1BH3BT56 60 aa5.76□□□□□ -1.49
SYNE2-217ENST00000555022 EGFEM1PQ0D2K5 195 aa5.76□□□□□ -1.49
SYNE2-217ENST00000555022 A0A087WSZ3 146 aa5.76□□□□□ -1.49
SYNE2-217ENST00000555022 DSCR10P59022 87 aa5.76□□□□□ -1.49
SYNE2-217ENST00000555022 OXLD1Q5BKU9 147 aa5.76□□□□□ -1.49
SYNE2-217ENST00000555022 PRR34Q9NV39 138 aa5.76□□□□□ -1.49
SYNE2-217ENST00000555022 PSCAO43653 123 aa5.75□□□□□ -1.49
SYNE2-217ENST00000555022 APOC4P55056 127 aa5.75□□□□□ -1.49
SYNE2-217ENST00000555022 PRR15LQ9BU68 103 aa5.75□□□□□ -1.49
SYNE2-217ENST00000555022 PCOTHQ58A44 107 aa5.74□□□□□ -1.49
SYNE2-217ENST00000555022 C4orf48Q5BLP8 95 aa5.73□□□□□ -1.49
SYNE2-217ENST00000555022 KRTAP1-1Q07627 177 aa5.72□□□□□ -1.49
SYNE2-217ENST00000555022 LINC00476Q8WZB0 136 aa5.72□□□□□ -1.49
SYNE2-217ENST00000555022 INAFM1C9JVW0 142 aa5.72□□□□□ -1.49
SYNE2-217ENST00000555022 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
SYNE2-217ENST00000555022 Q8NBF4 154 aa5.72□□□□□ -1.49
SYNE2-217ENST00000555022 ANK3Q12955 4377 aaKnown RBP5.71□□□□□ -1.5
SYNE2-217ENST00000555022 GVQW2A0A096LPI5 108 aaPredicted RBP5.71□□□□□ -1.5
SYNE2-217ENST00000555022 Q6ZRX8 168 aa5.7□□□□□ -1.5
SYNE2-217ENST00000555022 H0Y9J4 135 aa5.69□□□□□ -1.5
SYNE2-217ENST00000555022 MP68P56378 58 aa5.69□□□□□ -1.5
SYNE2-217ENST00000555022 STAB2Q8WWQ8 2551 aa5.68□□□□□ -1.5
SYNE2-217ENST00000555022 A6NED7 52 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms