RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 RPL13AP40429 203 aaKnown RBP6.53□□□□□ -1.36
SHMT2-215ENST00000554656 VAMP3Q15836 100 aa6.53□□□□□ -1.36
SHMT2-215ENST00000554656 GTF2H5Q6ZYL4 71 aa6.53□□□□□ -1.36
SHMT2-215ENST00000554656 LOC107984640A0A0U1RRK4 108 aa6.52□□□□□ -1.37
SHMT2-215ENST00000554656 Q1RN00 199 aa6.52□□□□□ -1.37
SHMT2-215ENST00000554656 LINC00337Q8N6G1 96 aa6.52□□□□□ -1.37
SHMT2-215ENST00000554656 LINC00474Q9P2X8 69 aa6.52□□□□□ -1.37
SHMT2-215ENST00000554656 TRBV20-1A0A075B6N2 111 aa6.51□□□□□ -1.37
SHMT2-215ENST00000554656 A0A1W2PNN7 141 aa6.51□□□□□ -1.37
SHMT2-215ENST00000554656 K7EP34 96 aa6.51□□□□□ -1.37
SHMT2-215ENST00000554656 COX6CP09669 75 aa6.51□□□□□ -1.37
SHMT2-215ENST00000554656 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
SHMT2-215ENST00000554656 SPINK6Q6UWN8 80 aa6.51□□□□□ -1.37
SHMT2-215ENST00000554656 Q6ZRP5 223 aa6.51□□□□□ -1.37
SHMT2-215ENST00000554656 SPCS1Q9Y6A9 102 aa6.51□□□□□ -1.37
SHMT2-215ENST00000554656 RNF213Q63HN8 5207 aa6.51□□□□□ -1.37
SHMT2-215ENST00000554656 GAGE10A6NGK3 116 aa6.5□□□□□ -1.37
SHMT2-215ENST00000554656 PSMB2P49721 201 aa6.5□□□□□ -1.37
SHMT2-215ENST00000554656 UBE2V1Q13404 147 aa6.5□□□□□ -1.37
SHMT2-215ENST00000554656 NAA38Q9BRA0 125 aaKnown RBP6.5□□□□□ -1.37
SHMT2-215ENST00000554656 TMEM126AQ9H061 195 aa6.5□□□□□ -1.37
SHMT2-215ENST00000554656 CBY1Q9Y3M2 126 aa6.5□□□□□ -1.37
SHMT2-215ENST00000554656 VPREB1P12018 145 aa6.49□□□□□ -1.37
SHMT2-215ENST00000554656 GAGE2BQ13066 116 aa6.49□□□□□ -1.37
SHMT2-215ENST00000554656 REG3GQ6UW15 175 aa6.49□□□□□ -1.37
SHMT2-215ENST00000554656 XAGE1AQ9HD64 81 aa6.49□□□□□ -1.37
SHMT2-215ENST00000554656 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
SHMT2-215ENST00000554656 H7C2G1 150 aa6.48□□□□□ -1.37
SHMT2-215ENST00000554656 M0R378 163 aa6.48□□□□□ -1.37
SHMT2-215ENST00000554656 TRIAP1O43715 76 aa6.48□□□□□ -1.37
SHMT2-215ENST00000554656 SCGB1C2P0DMR2 95 aa6.48□□□□□ -1.37
SHMT2-215ENST00000554656 RPL18AQ02543 176 aaKnown RBP6.48□□□□□ -1.37
SHMT2-215ENST00000554656 GAGE2EQ4V326 116 aa6.48□□□□□ -1.37
SHMT2-215ENST00000554656 GAGE2DQ9UEU5 116 aa6.48□□□□□ -1.37
SHMT2-215ENST00000554656 IGLV6-57P01721 117 aa6.47□□□□□ -1.37
SHMT2-215ENST00000554656 C9orf129Q5T035 196 aaKnown RBP6.47□□□□□ -1.37
SHMT2-215ENST00000554656 Q8NDZ9 215 aa6.47□□□□□ -1.37
SHMT2-215ENST00000554656 OR13C6PQ8NH95 151 aa6.47□□□□□ -1.37
SHMT2-215ENST00000554656 PSORS1C2Q9UIG4 136 aa6.47□□□□□ -1.37
SHMT2-215ENST00000554656 H0YGX0 51 aa6.46□□□□□ -1.38
SHMT2-215ENST00000554656 S100A7L2Q5SY68 101 aa6.46□□□□□ -1.38
SHMT2-215ENST00000554656 NCR3O14931 201 aa6.45□□□□□ -1.38
SHMT2-215ENST00000554656 ATXN8Q156A1 80 aa6.45□□□□□ -1.38
SHMT2-215ENST00000554656 PHF5AQ7RTV0 110 aaKnown RBP6.45□□□□□ -1.38
SHMT2-215ENST00000554656 NKAPP1Q8N9T2 125 aa6.45□□□□□ -1.38
SHMT2-215ENST00000554656 SMIM11BQ8TCY0 68 aa6.45□□□□□ -1.38
SHMT2-215ENST00000554656 LST1O00453 97 aa6.44□□□□□ -1.38
SHMT2-215ENST00000554656 TCL1BO95988 128 aa6.44□□□□□ -1.38
SHMT2-215ENST00000554656 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
SHMT2-215ENST00000554656 TRBV7-6A0A0J9YX20 115 aa6.43□□□□□ -1.38
SHMT2-215ENST00000554656 A0A1B0GX51 115 aa6.43□□□□□ -1.38
SHMT2-215ENST00000554656 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
SHMT2-215ENST00000554656 FAM168BA1KXE4 195 aa6.42□□□□□ -1.38
SHMT2-215ENST00000554656 F8W1H4 67 aa6.42□□□□□ -1.38
SHMT2-215ENST00000554656 TRACP01848 142 aa6.42□□□□□ -1.38
SHMT2-215ENST00000554656 KRTAP7-1Q8IUC3 87 aa6.42□□□□□ -1.38
SHMT2-215ENST00000554656 LPAP08519 4548 aa6.41□□□□□ -1.38
SHMT2-215ENST00000554656 TRAV23DV6A0A075B6W5 121 aa6.41□□□□□ -1.38
SHMT2-215ENST00000554656 H3BMG7 143 aa6.41□□□□□ -1.38
SHMT2-215ENST00000554656 C1orf137Q5JT78 98 aa6.41□□□□□ -1.38
SHMT2-215ENST00000554656 M0QXV9 152 aa6.4□□□□□ -1.38
SHMT2-215ENST00000554656 KCNQ1DNQ9H478 68 aa6.4□□□□□ -1.38
SHMT2-215ENST00000554656 PRYO14603 147 aa6.39□□□□□ -1.39
SHMT2-215ENST00000554656 SNCGO76070 127 aa6.39□□□□□ -1.39
SHMT2-215ENST00000554656 IGLV7-43P04211 117 aa6.39□□□□□ -1.39
SHMT2-215ENST00000554656 C6orf99Q4VX62 202 aa6.39□□□□□ -1.39
SHMT2-215ENST00000554656 PRR26Q8N8Z3 221 aa6.39□□□□□ -1.39
SHMT2-215ENST00000554656 CLEC2BQ92478 149 aa6.39□□□□□ -1.39
SHMT2-215ENST00000554656 DIRC1Q969H9 104 aa6.39□□□□□ -1.39
SHMT2-215ENST00000554656 PRO0461Q9UI25 63 aa6.39□□□□□ -1.39
SHMT2-215ENST00000554656 C22orf24Q9Y442 160 aa6.39□□□□□ -1.39
SHMT2-215ENST00000554656 H3BT86 120 aa6.38□□□□□ -1.39
SHMT2-215ENST00000554656 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
SHMT2-215ENST00000554656 FAM19A5Q7Z5A7 132 aaPredicted RBP6.38□□□□□ -1.39
SHMT2-215ENST00000554656 MRPL55Q7Z7F7 128 aaKnown RBP6.38□□□□□ -1.39
SHMT2-215ENST00000554656 IGLV1-50A0A075B6I6 118 aa6.37□□□□□ -1.39
SHMT2-215ENST00000554656 H0Y9J4 135 aa6.37□□□□□ -1.39
SHMT2-215ENST00000554656 KRTAP1-4P0C5Y4 121 aa6.37□□□□□ -1.39
SHMT2-215ENST00000554656 LINC00167Q96N53 147 aa6.37□□□□□ -1.39
SHMT2-215ENST00000554656 C9JAW5 83 aa6.36□□□□□ -1.39
SHMT2-215ENST00000554656 SLC25A20O43772 301 aa6.36□□□□□ -1.39
SHMT2-215ENST00000554656 DNAL4O96015 105 aa6.36□□□□□ -1.39
SHMT2-215ENST00000554656 SPRR1AP35321 89 aa6.36□□□□□ -1.39
SHMT2-215ENST00000554656 ELOF1P60002 83 aaKnown RBP6.36□□□□□ -1.39
SHMT2-215ENST00000554656 FAM218AQ96MZ4 157 aa6.36□□□□□ -1.39
SHMT2-215ENST00000554656 H3BQ85 93 aa6.35□□□□□ -1.39
SHMT2-215ENST00000554656 COX7BP24311 80 aa6.35□□□□□ -1.39
SHMT2-215ENST00000554656 LINC00575Q6W349 94 aa6.35□□□□□ -1.39
SHMT2-215ENST00000554656 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.39
SHMT2-215ENST00000554656 ANKRD29Q8N6D5 301 aa6.34□□□□□ -1.39
SHMT2-215ENST00000554656 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
SHMT2-215ENST00000554656 GHRHP01286 108 aa6.33□□□□□ -1.4
SHMT2-215ENST00000554656 hADV29S1A0JD25 119 aa6.32□□□□□ -1.4
SHMT2-215ENST00000554656 OCIAD2Q56VL3 154 aa6.32□□□□□ -1.4
SHMT2-215ENST00000554656 TEN1Q86WV5 123 aa6.32□□□□□ -1.4
SHMT2-215ENST00000554656 ETDCA0A1B0GVM5 59 aa6.31□□□□□ -1.4
SHMT2-215ENST00000554656 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.31□□□□□ -1.4
SHMT2-215ENST00000554656 ORMDL1Q9P0S3 153 aa6.31□□□□□ -1.4
SHMT2-215ENST00000554656 DHRS4-AS1Q9P1J3 65 aa6.31□□□□□ -1.4
SHMT2-215ENST00000554656 RPL37AP8A6NKH3 93 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms