RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 IGLV2-23P01705 113 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 CTSGP08311 255 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 CRIP1P50238 77 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 C2orf66Q6UXQ4 117 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 CELA1Q9UNI1 258 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 UBR4Q5T4S7 5183 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 CSMD3Q7Z407 3707 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 FRAS1Q86XX4 4008 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 IGHV4-4A0A075B6R2 117 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 CLPSL1A2RUU4 121 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 A8MU10 97 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 K7EIL1 84 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 TFF1P04155 84 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 IGHV1-8P0DP01 117 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 WT1-ASQ06250 92 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 FAM74A4Q5TZK3 123 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 B9D2Q9BPU9 175 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 SND1-IT1Q9HBX3 110 aa2.95□□□□□ -1.94
ATXN3-227ENST00000554491 IGHV3-72A0A0B4J1Y9 119 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 NDUFB1O75438 58 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 IGLV1-47P01700 117 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 IGLV1-51P01701 117 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 IGHV1-69P01742 117 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 PDE6GP18545 87 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 KLK9Q2XQG4 91 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 DEFB108BQ8NET1 73 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 MUC7Q8TAX7 377 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 LEAP2Q969E1 77 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 ZNF625Q96I27 306 aaPredicted RBP2.94□□□□□ -1.94
ATXN3-227ENST00000554491 KLK9Q9UKQ9 250 aa2.94□□□□□ -1.94
ATXN3-227ENST00000554491 ALMS1Q8TCU4 4167 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 HECTD4Q9Y4D8 3996 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 IGLV5-45A0A087WSX0 123 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 TRAV21A0A0B4J279 112 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 IGHV1-3A0A0C4DH29 117 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 LYNX1G3V0Z9 82 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 I3L2K1 104 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 BPY2O14599 106 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 LYNX1P0DP58 116 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 CCL3L1P16619 93 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 REG3AQ06141 175 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 Q8N814 137 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 WFDC9Q8NEX5 89 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 NPBQ8NG41 125 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 Q9BRP9 147 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 LINC00467Q9BRT7 94 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 OCR1Q9BZK8 76 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 ORMDL1Q9P0S3 153 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 S4R3C0 116 aa2.93□□□□□ -1.94
ATXN3-227ENST00000554491 KRTAP16-1A8MUX0 517 aa2.92□□□□□ -1.94
ATXN3-227ENST00000554491 H3BRN7 92 aa2.92□□□□□ -1.94
ATXN3-227ENST00000554491 PRB4P10163 310 aaPredicted RBP2.92□□□□□ -1.94
ATXN3-227ENST00000554491 MINOS1Q5TGZ0 78 aa2.92□□□□□ -1.94
ATXN3-227ENST00000554491 LINC01006Q8NI28 216 aa2.92□□□□□ -1.94
ATXN3-227ENST00000554491 DPM3Q9P2X0 92 aa2.92□□□□□ -1.94
ATXN3-227ENST00000554491 MINOS1-NBL1R4GNA1 71 aa2.92□□□□□ -1.94
ATXN3-227ENST00000554491 IGHV3OR16-12A0A075B7B8 117 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 LOC110117498A0A087WWA1 95 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 LRCOL1A6NCL2 159 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 H3BQ85 93 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 K7EQD1 137 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 ATP6V0E1O15342 81 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 TSHBP01222 138 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 IGKV1-17P01599 117 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 LYZP61626 148 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 HCP5Q6MZN7 132 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 MIR7-3HGQ8N6C7 128 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 ZCCHC13Q8WW36 166 aaKnown RBP2.91□□□□□ -1.94
ATXN3-227ENST00000554491 FAM218AQ96MZ4 157 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 LINC00167Q96N53 147 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 MUC4Q99102 2169 aa2.91□□□□□ -1.94
ATXN3-227ENST00000554491 HUWE1Q7Z6Z7 4374 aaKnown RBP2.91□□□□□ -1.94
ATXN3-227ENST00000554491 IGLV11-55A0A075B6I3 123 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV1OR15-1A0A075B7D0 117 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV3-35A0A0C4DH35 117 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 TRBV6-5A0A0K0K1A5 114 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 K7EIM0 57 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 NCR3O14931 201 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV3-30-3P0DP02 117 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 DSCR10P59022 87 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 C10orf55Q5SWW7 151 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 LYPD2Q6UXB3 125 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 SPANXA2-OT1Q8N9U9 137 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 C20orf203Q8NBC4 194 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 LINC00308Q8TCZ7 52 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 PRAC1Q96KF2 57 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 LENEPQ9Y5L5 61 aa2.9□□□□□ -1.95
ATXN3-227ENST00000554491 PLECQ15149 4684 aaKnown RBP2.9□□□□□ -1.95
ATXN3-227ENST00000554491 A0A087WW49 117 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 TRBV10-1A0A0K0K1A3 114 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 ODF3BA8MYP8 253 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 NDUFA1O15239 70 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV3-48P01763 117 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 IGHV4-38-2P0DP08 117 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 ROMO1P60602 79 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 HAMPP81172 84 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 NDPQ00604 133 aa2.89□□□□□ -1.95
ATXN3-227ENST00000554491 DEFB114Q30KQ6 69 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms