RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PRR4Q16378 134 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 RNASE13Q5GAN3 156 aaKnown RBP1.81□□□□□ -2.12
PRPF39-206ENST00000554429 SUMO4Q6EEV6 95 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 Q86TA4 180 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM167AQ8TBQ9 72 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 IFI27L1Q96BM0 104 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 LINC01600Q96MT4 127 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 PKD1P98161 4303 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 IGLV11-55A0A075B6I3 123 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 TRAV22A0A0B4J277 110 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 NDUFC1O43677 76 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 SH2D1AO60880 128 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 MGPP08493 103 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 SPANXN1Q5VSR9 72 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 SMCR5Q8TEV8 140 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 TIMM21Q9BVV7 248 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 NDUFA4L2Q9NRX3 87 aa1.81□□□□□ -2.12
PRPF39-206ENST00000554429 IGLV8-61A0A075B6I0 122 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 TRBV25-1A0A075B6N4 114 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 A0A0B4J2C4 111 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 NDUFA4O00483 81 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 C9orf116Q5BN46 136 aaPredicted RBP1.8□□□□□ -2.12
PRPF39-206ENST00000554429 C10orf25Q5T742 122 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 FAM74A4Q5TZK3 123 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 TMEM190Q8WZ59 177 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 RPL39LQ96EH5 51 aaKnown RBP1.8□□□□□ -2.12
PRPF39-206ENST00000554429 CAMK2N2Q96S95 79 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 KRTAP3-1Q9BYR8 98 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 KMT2AQ03164 3969 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 SSPOA2VEC9 5147 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 IGHV3-73A0A0B4J1V6 119 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 A0A0J9YWU9 116 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 LINC01549A6NIU2 74 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 CHKB-CPT1BH3BT56 60 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 LY6G6CO95867 125 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 IGKV1-17P01599 117 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 IGLV2-11P01706 119 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 ROMO1P60602 79 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 KLKP1Q107X0 134 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 Q6ZR54 194 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 C7orf33Q8WU49 177 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 RYR1P21817 5038 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 TRAV12-3A0A0B4J271 114 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 SDHAF1A6NFY7 115 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 SMIM1B2RUZ4 78 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 K7ERS5 55 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 LECT2O14960 151 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 C14orf178Q8N769 122 aaPredicted RBP1.8□□□□□ -2.12
PRPF39-206ENST00000554429 CIRBP-AS1Q8TBR5 109 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 PRO1854Q9UHT4 67 aa1.8□□□□□ -2.12
PRPF39-206ENST00000554429 hDV103S1A0JD37 113 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 BAALC-AS2P0C853 105 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 RPL39P62891 51 aaKnown RBP1.79□□□□□ -2.12
PRPF39-206ENST00000554429 MOBPQ13875 183 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 SDIM1Q6ZPB5 146 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 Q8NAQ8 132 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 Q8NBF4 154 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 ZNF625Q96I27 306 aaPredicted RBP1.79□□□□□ -2.12
PRPF39-206ENST00000554429 SNURFQ9Y675 71 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 A0A087WVE0 104 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 TRAV10A0A0B4J240 114 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 TLX1NBP0CAT3 122 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 MIFP14174 115 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 Q1RN00 199 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 Q5VV11 94 aa1.79□□□□□ -2.12
PRPF39-206ENST00000554429 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
PRPF39-206ENST00000554429 PIGBOS1A0A0B4J2F0 54 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 TRBV10-2A0A0K0K1G8 114 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 A0A1B0GW54 56 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 ZNF815PA8K554 130 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 RTL8CO15255 209 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 RPL36AP83881 106 aaKnown RBP1.78□□□□□ -2.12
PRPF39-206ENST00000554429 MIAQ16674 131 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 C2orf82Q6UX34 121 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 WFDC10AQ9H1F0 79 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 UBR4Q5T4S7 5183 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 VPS13BQ7Z7G8 4022 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 IGHV7-4-1A0A0J9YVY3 117 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 LRCOL1A6NCL2 159 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 A8MTW9 85 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 K7EIM0 57 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 GIG44P09565 113 aaPredicted RBP1.78□□□□□ -2.12
PRPF39-206ENST00000554429 IGHV3-30-3P0DP02 117 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 PRR9Q5T870 116 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 Q8NDZ9 215 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 XAGE1AQ9HD64 81 aa1.78□□□□□ -2.12
PRPF39-206ENST00000554429 IGKV3D-7A0A0C4DH55 119 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 SOCS3O14543 225 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 ATXN8Q156A1 80 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 CASC2Q6XLA1 102 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 Q6ZQT0 140 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 CDC42SE1Q9NRR8 79 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 ABCA13Q86UQ4 5058 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 HSPG2P98160 4391 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 HERC1Q15751 4861 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 IGKV3OR2-268A0A0C4DH90 116 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 I3L2K1 104 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 DEFB135Q30KP9 77 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 C2orf66Q6UXQ4 117 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms