RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 LINC00518Q8N0U6 118 aa16.96■□□□□ 0.31
PCNX1-206ENST00000554292 TRAV23DV6A0A075B6W5 121 aa16.95■□□□□ 0.3
PCNX1-206ENST00000554292 KRTAP4-16G5E9R7 235 aaPredicted RBP16.95■□□□□ 0.3
PCNX1-206ENST00000554292 CRYGAP11844 174 aa16.93■□□□□ 0.3
PCNX1-206ENST00000554292 OR13C6PQ8NH95 151 aa16.93■□□□□ 0.3
PCNX1-206ENST00000554292 FAM229BQ4G0N7 80 aa16.91■□□□□ 0.3
PCNX1-206ENST00000554292 ZNF706Q9Y5V0 76 aaPredicted RBP16.9■□□□□ 0.3
PCNX1-206ENST00000554292 B5MCH6 92 aa16.89■□□□□ 0.29
PCNX1-206ENST00000554292 ZNF73O43830 326 aaPredicted RBP16.88■□□□□ 0.29
PCNX1-206ENST00000554292 A0A087X002 238 aa16.86■□□□□ 0.29
PCNX1-206ENST00000554292 HINT1P49773 126 aaPredicted RBP16.86■□□□□ 0.29
PCNX1-206ENST00000554292 JOSD1Q15040 202 aaPredicted RBP16.86■□□□□ 0.29
PCNX1-206ENST00000554292 Q6ZRX8 168 aa16.86■□□□□ 0.29
PCNX1-206ENST00000554292 MUSTN1Q8IVN3 82 aa16.86■□□□□ 0.29
PCNX1-206ENST00000554292 SMCR5Q8TEV8 140 aa16.84■□□□□ 0.29
PCNX1-206ENST00000554292 ANAPC11Q9NYG5 84 aa16.84■□□□□ 0.29
PCNX1-206ENST00000554292 TYMSOSQ8TAI1 123 aa16.83■□□□□ 0.28
PCNX1-206ENST00000554292 COX8AP10176 69 aa16.82■□□□□ 0.28
PCNX1-206ENST00000554292 SPRR4Q96PI1 79 aa16.82■□□□□ 0.28
PCNX1-206ENST00000554292 TMA7Q9Y2S6 64 aaKnown RBP16.82■□□□□ 0.28
PCNX1-206ENST00000554292 VAMP8Q9BV40 100 aa16.8■□□□□ 0.28
PCNX1-206ENST00000554292 DLEU1O43261 78 aa16.78■□□□□ 0.28
PCNX1-206ENST00000554292 PAM16Q9Y3D7 125 aa16.78■□□□□ 0.28
PCNX1-206ENST00000554292 SPATA45Q537H7 98 aa16.77■□□□□ 0.28
PCNX1-206ENST00000554292 Q9BRP9 147 aa16.77■□□□□ 0.28
PCNX1-206ENST00000554292 A6NDN8 102 aa16.76■□□□□ 0.27
PCNX1-206ENST00000554292 TRAV13-2A0A0B4J235 113 aa16.75■□□□□ 0.27
PCNX1-206ENST00000554292 KRTAP13-2Q52LG2 175 aa16.75■□□□□ 0.27
PCNX1-206ENST00000554292 ERC2-IT1O76042 136 aa16.71■□□□□ 0.27
PCNX1-206ENST00000554292 C6orf99Q4VX62 202 aa16.71■□□□□ 0.27
PCNX1-206ENST00000554292 C14orf144Q96I85 54 aa16.71■□□□□ 0.27
PCNX1-206ENST00000554292 HIST1H4GQ99525 98 aa16.71■□□□□ 0.27
PCNX1-206ENST00000554292 COX7BP24311 80 aa16.69■□□□□ 0.26
PCNX1-206ENST00000554292 DHRS4-AS1Q9P1J3 65 aa16.69■□□□□ 0.26
PCNX1-206ENST00000554292 LINC00483Q53H64 154 aa16.68■□□□□ 0.26
PCNX1-206ENST00000554292 GAGE2AQ6NT46 116 aa16.68■□□□□ 0.26
PCNX1-206ENST00000554292 SLC25A34Q6PIV7 304 aa16.68■□□□□ 0.26
PCNX1-206ENST00000554292 TRBV7-6A0A0J9YX20 115 aa16.67■□□□□ 0.26
PCNX1-206ENST00000554292 A4D1N5 150 aa16.67■□□□□ 0.26
PCNX1-206ENST00000554292 ELOF1P60002 83 aaKnown RBP16.67■□□□□ 0.26
PCNX1-206ENST00000554292 HMCN2Q8NDA2 5059 aa16.67■□□□□ 0.26
PCNX1-206ENST00000554292 PYY3Q5JQD4 70 aa16.65■□□□□ 0.26
PCNX1-206ENST00000554292 HIGD1BQ9P298 99 aa16.65■□□□□ 0.26
PCNX1-206ENST00000554292 C3orf22Q8N5N4 141 aa16.64■□□□□ 0.25
PCNX1-206ENST00000554292 LINC00304Q8N9R0 145 aa16.64■□□□□ 0.25
PCNX1-206ENST00000554292 A0A1B0GWB2 263 aa16.62■□□□□ 0.25
PCNX1-206ENST00000554292 TSPAN13O95857 204 aa16.58■□□□□ 0.24
PCNX1-206ENST00000554292 SMIM11BQ8TCY0 68 aa16.58■□□□□ 0.24
PCNX1-206ENST00000554292 CTAG1AP78358 180 aa16.56■□□□□ 0.24
PCNX1-206ENST00000554292 C2orf91Q6ZV80 131 aa16.55■□□□□ 0.24
PCNX1-206ENST00000554292 ST20-AS1Q8NBB2 130 aa16.55■□□□□ 0.24
PCNX1-206ENST00000554292 VAMP3Q15836 100 aa16.53■□□□□ 0.24
PCNX1-206ENST00000554292 SPAG11AQ6PDA7 123 aa16.53■□□□□ 0.24
PCNX1-206ENST00000554292 TAL2Q16559 108 aa16.52■□□□□ 0.24
PCNX1-206ENST00000554292 C12orf57Q99622 126 aa16.52■□□□□ 0.24
PCNX1-206ENST00000554292 NHP2Q9NX24 153 aaKnown RBP16.52■□□□□ 0.24
PCNX1-206ENST00000554292 IGLV9-49A0A0B4J1Y8 123 aa16.51■□□□□ 0.23
PCNX1-206ENST00000554292 C4orf48Q5BLP8 95 aa16.5■□□□□ 0.23
PCNX1-206ENST00000554292 SPRR1BP22528 89 aa16.49■□□□□ 0.23
PCNX1-206ENST00000554292 MOBPQ13875 183 aa16.49■□□□□ 0.23
PCNX1-206ENST00000554292 Q8NBF4 154 aa16.49■□□□□ 0.23
PCNX1-206ENST00000554292 SSBP3-AS1Q7Z2R9 100 aa16.48■□□□□ 0.23
PCNX1-206ENST00000554292 SLC25A20O43772 301 aa16.46■□□□□ 0.23
PCNX1-206ENST00000554292 RAB37Q96AX2 223 aa16.46■□□□□ 0.23
PCNX1-206ENST00000554292 TMEM238LA0A1B0GVL6 79 aa16.45■□□□□ 0.22
PCNX1-206ENST00000554292 A6NJY4 79 aa16.45■□□□□ 0.22
PCNX1-206ENST00000554292 C9orf153Q5TBE3 101 aa16.45■□□□□ 0.22
PCNX1-206ENST00000554292 CEND1Q8N111 149 aa16.45■□□□□ 0.22
PCNX1-206ENST00000554292 PRR4Q16378 134 aa16.44■□□□□ 0.22
PCNX1-206ENST00000554292 A0A0B4J2C4 111 aa16.43■□□□□ 0.22
PCNX1-206ENST00000554292 CFC1BP0CG36 223 aa16.43■□□□□ 0.22
PCNX1-206ENST00000554292 CFC1P0CG37 223 aa16.43■□□□□ 0.22
PCNX1-206ENST00000554292 LAMTOR3Q9UHA4 124 aa16.42■□□□□ 0.22
PCNX1-206ENST00000554292 TEX49A0A1B0GTD5 131 aa16.41■□□□□ 0.22
PCNX1-206ENST00000554292 BVES-AS1Q5T3Y7 98 aa16.41■□□□□ 0.22
PCNX1-206ENST00000554292 DEFB105AQ8NG35 78 aa16.4■□□□□ 0.22
PCNX1-206ENST00000554292 UQCR10Q9UDW1 63 aa16.39■□□□□ 0.21
PCNX1-206ENST00000554292 SPINK1P00995 79 aa16.38■□□□□ 0.21
PCNX1-206ENST00000554292 HSD52Q0P140 79 aa16.37■□□□□ 0.21
PCNX1-206ENST00000554292 LINC00575Q6W349 94 aa16.37■□□□□ 0.21
PCNX1-206ENST00000554292 IGLV5-48A0A075B6I7 105 aa16.36■□□□□ 0.21
PCNX1-206ENST00000554292 H7C2G1 150 aa16.36■□□□□ 0.21
PCNX1-206ENST00000554292 hADV29S1A0JD25 119 aa16.33■□□□□ 0.2
PCNX1-206ENST00000554292 FXYD2P54710 66 aa16.32■□□□□ 0.2
PCNX1-206ENST00000554292 Q1RN00 199 aa16.31■□□□□ 0.2
PCNX1-206ENST00000554292 PRO1854Q9UHT4 67 aa16.31■□□□□ 0.2
PCNX1-206ENST00000554292 LINC01547P58512 204 aaPredicted RBP16.3■□□□□ 0.2
PCNX1-206ENST00000554292 RPS29P62273 56 aaKnown RBP16.3■□□□□ 0.2
PCNX1-206ENST00000554292 RETNLBQ9BQ08 111 aa16.3■□□□□ 0.2
PCNX1-206ENST00000554292 LRP2P98164 4655 aa16.28■□□□□ 0.2
PCNX1-206ENST00000554292 Q6ZQY7 126 aa16.26■□□□□ 0.19
PCNX1-206ENST00000554292 H0YGX0 51 aa16.25■□□□□ 0.19
PCNX1-206ENST00000554292 SNCGO76070 127 aa16.25■□□□□ 0.19
PCNX1-206ENST00000554292 SMIM6P0DI80 62 aa16.24■□□□□ 0.19
PCNX1-206ENST00000554292 SMIM29Q86T20 159 aa16.24■□□□□ 0.19
PCNX1-206ENST00000554292 Q8N377 158 aa16.24■□□□□ 0.19
PCNX1-206ENST00000554292 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.23■□□□□ 0.19
PCNX1-206ENST00000554292 PRO1933Q9H354 126 aa16.23■□□□□ 0.19
PCNX1-206ENST00000554292 F8WEM9 126 aa16.2■□□□□ 0.18
PCNX1-206ENST00000554292 FP248Q71RG6 208 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms