RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 GNGT1P63211 74 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 TDRG1Q3Y452 100 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 UNQ6190/PRO20217Q6UXQ8 127 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 OR10AG1Q8NH19 301 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 FXYD6Q9H0Q3 95 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 GSKIPQ9P0R6 139 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 LSM2Q9Y333 95 aaKnown RBP1.21□□□□□ -2.22
SCFD1-210ENST00000553693 TRAV1-2A0A0B4J238 106 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 TRBV7-6A0A0J9YX20 115 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 LOC107984640A0A0U1RRK4 108 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 C3orf85A0A1B0GTC6 90 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 A0A1B0GX51 115 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 CEBPZOSA8MTT3 80 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 J3QR89 54 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 PDCD5O14737 125 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 PDCD10Q9BUL8 212 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 TNFSF18Q9UNG2 199 aa1.2□□□□□ -2.22
SCFD1-210ENST00000553693 A0A087WSZ3 146 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 LOC107984156A0A0G2JMH3 177 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 TRBV6-4A0A1B0GX49 114 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 PITX3O75364 302 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 RNASE3P12724 160 aaKnown RBP1.19□□□□□ -2.22
SCFD1-210ENST00000553693 CNBPP62633 177 aaKnown RBP1.19□□□□□ -2.22
SCFD1-210ENST00000553693 NMSQ5H8A3 153 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 CASC2Q6XLA1 102 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 ARL17AQ8IVW1 177 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 ATP6V0E2Q8NHE4 81 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 CLEC2BQ92478 149 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 DIRC1Q969H9 104 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 DPH3Q96FX2 82 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 TRGV9Q99603 122 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 HSPB8Q9UJY1 196 aa1.19□□□□□ -2.22
SCFD1-210ENST00000553693 CRYM-AS1A6NIL9 109 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 C9JAW5 83 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 H3BQ15 152 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 UQCRQO14949 82 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 NUPR1O60356 82 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 ANGP03950 147 aaKnown RBP1.18□□□□□ -2.22
SCFD1-210ENST00000553693 SLC25A5P05141 298 aaKnown RBP1.18□□□□□ -2.22
SCFD1-210ENST00000553693 CKS2P33552 79 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 S100A12P80511 92 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 SPINK6Q6UWN8 80 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 C8orf59Q8N0T1 100 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-210ENST00000553693 LINC00526Q96FQ7 95 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 ZC2HC1AQ96GY0 325 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 SMIM7Q9BQ49 75 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 AGPAT4-IT1Q9H0P7 198 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 PLAC8Q9NZF1 115 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 HIGD1AQ9Y241 93 aa1.18□□□□□ -2.22
SCFD1-210ENST00000553693 SYNE2Q8WXH0 6885 aaKnown RBP1.17□□□□□ -2.22
SCFD1-210ENST00000553693 C9orf170A2RU37 121 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 M0R3E3 92 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 CFDP00746 253 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-210ENST00000553693 HBDP02042 147 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 IAPPP10997 89 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 ZNF25P17030 456 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-210ENST00000553693 FOXA3P55318 350 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-210ENST00000553693 CKS1BP61024 79 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 KRTAP26-1Q6PEX3 210 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 ENHOQ6UWT2 76 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 TMEM14EPQ6UXP3 125 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 CYP2G1PQ6ZSU1 146 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 C5orf17Q8NAS9 161 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 ODF3Q96PU9 254 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 CIB3Q96Q77 187 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-210ENST00000553693 SCN3BQ9NY72 215 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 COPZ2Q9P299 210 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 PAIP2BQ9ULR5 123 aaKnown RBP1.17□□□□□ -2.22
SCFD1-210ENST00000553693 ZFP30Q9Y2G7 519 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 MUC17Q685J3 4493 aa1.17□□□□□ -2.22
SCFD1-210ENST00000553693 MACF1Q9UPN3 7388 aaKnown RBP1.17□□□□□ -2.22
SCFD1-210ENST00000553693 LOC110117498A0A087WWA1 95 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 LOC105371267A0A1B0GV96 52 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 M0R2P5 195 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 INE1O15225 51 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 CCL25O15444 150 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 MT-ND4LP03901 98 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 IL5P05113 134 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 LINC00694P0DN24 101 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 IGLC2P0DOY2 106 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 NCS1P62166 190 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 NEDD8Q15843 81 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 CFAP126Q5VTH2 177 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 Q8TAT8 98 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 S100A16Q96FQ6 103 aaKnown RBP1.16□□□□□ -2.22
SCFD1-210ENST00000553693 PFDN5Q99471 154 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 NIT2Q9NQR4 276 aa1.16□□□□□ -2.22
SCFD1-210ENST00000553693 TRAV23DV6A0A075B6W5 121 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 A0A087WWC5 75 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 IGHV1-24A0A0C4DH33 117 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 FAM24AA6NFZ4 105 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 ARPC5O15511 151 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 CD3DP04234 171 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 TCRAP04437 139 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 NMBP08949 121 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 COX6A2Q02221 97 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 MIR22HGQ0VDD5 57 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 Q0VG73 95 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 RHOHQ15669 191 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 IZUMO2Q6UXV1 221 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms