RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 CEND1Q8N111 149 aa2.88□□□□□ -1.95
ATXN3-222ENST00000553570 ERG28Q9UKR5 140 aa2.88□□□□□ -1.95
ATXN3-222ENST00000553570 C22orf24Q9Y442 160 aa2.88□□□□□ -1.95
ATXN3-222ENST00000553570 MYMXA0A1B0GTQ4 84 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 C20orf202A1L168 122 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 TSTD3H0UI37 97 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 LEPROTO15243 131 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 SMIM13P0DJ93 91 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 PLNP26678 52 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 HNRNPA3P51991 378 aaKnown RBP2.87□□□□□ -1.95
ATXN3-222ENST00000553570 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
ATXN3-222ENST00000553570 JOSD1Q15040 202 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-222ENST00000553570 MTURNQ8N3F0 131 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 NDUFA12Q9UI09 145 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 PSORS1C2Q9UIG4 136 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
ATXN3-222ENST00000553570 SYS1-DBNDD2H3BUS1 97 aa2.86□□□□□ -1.95
ATXN3-222ENST00000553570 NPC2P61916 151 aa2.86□□□□□ -1.95
ATXN3-222ENST00000553570 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
ATXN3-222ENST00000553570 LINC00167Q96N53 147 aa2.86□□□□□ -1.95
ATXN3-222ENST00000553570 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
ATXN3-222ENST00000553570 KIAA1109Q2LD37 5005 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 DYNC1H1Q14204 4646 aaKnown RBP2.85□□□□□ -1.95
ATXN3-222ENST00000553570 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 LINC00587B1AMM8 73 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 J3QQQ9 107 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 C3orf79P0CE67 100 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 COX17Q14061 63 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 SFTA2Q6UW10 78 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 SPINK6Q6UWN8 80 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 MRPL55Q7Z7F7 128 aaKnown RBP2.85□□□□□ -1.95
ATXN3-222ENST00000553570 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 BOD1L2Q8IYS8 172 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 ATOH7Q8N100 152 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 MIR7-3HGQ8N6C7 128 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 DAND5Q8N907 189 aa2.85□□□□□ -1.95
ATXN3-222ENST00000553570 PCP4L1A6NKN8 68 aa2.84□□□□□ -1.95
ATXN3-222ENST00000553570 NCR3O14931 201 aa2.84□□□□□ -1.95
ATXN3-222ENST00000553570 OXTP01178 125 aa2.84□□□□□ -1.95
ATXN3-222ENST00000553570 UBE2AP49459 152 aa2.84□□□□□ -1.95
ATXN3-222ENST00000553570 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.95
ATXN3-222ENST00000553570 DIRC1Q969H9 104 aa2.84□□□□□ -1.95
ATXN3-222ENST00000553570 MIEN1Q9BRT3 115 aa2.84□□□□□ -1.95
ATXN3-222ENST00000553570 VAMP8Q9BV40 100 aa2.84□□□□□ -1.95
ATXN3-222ENST00000553570 DNAH5Q8TE73 4624 aa2.83□□□□□ -1.96
ATXN3-222ENST00000553570 ZNF815PA8K554 130 aa2.83□□□□□ -1.96
ATXN3-222ENST00000553570 HSBP1L1C9JCN9 74 aa2.83□□□□□ -1.96
ATXN3-222ENST00000553570 KRTAP1-4P0C5Y4 121 aa2.83□□□□□ -1.96
ATXN3-222ENST00000553570 NMUP48645 174 aa2.83□□□□□ -1.96
ATXN3-222ENST00000553570 TSPEAR-AS2P59090 65 aa2.83□□□□□ -1.96
ATXN3-222ENST00000553570 LINC01545Q5VT33 79 aa2.83□□□□□ -1.96
ATXN3-222ENST00000553570 FAM19A1Q7Z5A9 133 aa2.83□□□□□ -1.96
ATXN3-222ENST00000553570 OR13C6PQ8NH95 151 aa2.83□□□□□ -1.96
ATXN3-222ENST00000553570 HERC2O95714 4834 aa2.82□□□□□ -1.96
ATXN3-222ENST00000553570 TMEM238C9JI98 176 aa2.82□□□□□ -1.96
ATXN3-222ENST00000553570 M0R378 163 aa2.82□□□□□ -1.96
ATXN3-222ENST00000553570 RPL28P46779 137 aaKnown RBP2.82□□□□□ -1.96
ATXN3-222ENST00000553570 S100A7L2Q5SY68 101 aa2.82□□□□□ -1.96
ATXN3-222ENST00000553570 SCGB1D4Q6XE38 83 aa2.82□□□□□ -1.96
ATXN3-222ENST00000553570 TTTY13Q9BZ97 58 aa2.82□□□□□ -1.96
ATXN3-222ENST00000553570 TP73-AS1Q9UF72 201 aa2.82□□□□□ -1.96
ATXN3-222ENST00000553570 LRP1BQ9NZR2 4599 aa2.82□□□□□ -1.96
ATXN3-222ENST00000553570 HSPG2P98160 4391 aa2.82□□□□□ -1.96
ATXN3-222ENST00000553570 IGLV1-50A0A075B6I6 118 aa2.81□□□□□ -1.96
ATXN3-222ENST00000553570 IGKV2D-26A0A0A0MRZ7 120 aa2.81□□□□□ -1.96
ATXN3-222ENST00000553570 A0A0J9YXY3 114 aa2.81□□□□□ -1.96
ATXN3-222ENST00000553570 ZNF861PO60384 105 aa2.81□□□□□ -1.96
ATXN3-222ENST00000553570 BCE1O60756 84 aa2.81□□□□□ -1.96
ATXN3-222ENST00000553570 DDTP30046 118 aa2.81□□□□□ -1.96
ATXN3-222ENST00000553570 RPL13AP40429 203 aaKnown RBP2.81□□□□□ -1.96
ATXN3-222ENST00000553570 PRLHP81277 87 aa2.81□□□□□ -1.96
ATXN3-222ENST00000553570 SPATA45Q537H7 98 aa2.81□□□□□ -1.96
ATXN3-222ENST00000553570 PCLOQ9Y6V0 5065 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
ATXN3-222ENST00000553570 DMBT1Q9UGM3 2413 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-222ENST00000553570 RYR1P21817 5038 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 ETDCA0A1B0GVM5 59 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 H0Y9J4 135 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 Q8NDZ9 215 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 LINC01600Q96MT4 127 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 HIGD2AQ9BW72 106 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 TMEM126AQ9H061 195 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 PRO1933Q9H354 126 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 ANAPC11Q9NYG5 84 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 UQCR10Q9UDW1 63 aa2.8□□□□□ -1.96
ATXN3-222ENST00000553570 TRBV10-3A0A0K0K1G6 114 aa2.79□□□□□ -1.96
ATXN3-222ENST00000553570 PCP2Q8IVA1 136 aa2.79□□□□□ -1.96
ATXN3-222ENST00000553570 LINC00308Q8TCZ7 52 aa2.79□□□□□ -1.96
ATXN3-222ENST00000553570 A6NDN8 102 aa2.78□□□□□ -1.96
ATXN3-222ENST00000553570 TSPAN13O95857 204 aa2.78□□□□□ -1.96
ATXN3-222ENST00000553570 HINT1P49773 126 aaPredicted RBP2.78□□□□□ -1.96
ATXN3-222ENST00000553570 SLC25A34Q6PIV7 304 aa2.78□□□□□ -1.96
ATXN3-222ENST00000553570 MUSTN1Q8IVN3 82 aa2.78□□□□□ -1.96
ATXN3-222ENST00000553570 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
ATXN3-222ENST00000553570 DNAH8Q96JB1 4490 aa2.78□□□□□ -1.97
ATXN3-222ENST00000553570 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms