RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 IFITM1P13164 125 aa13.57□□□□□ -0.24
TDP1-206ENST00000553569 RPL13AP40429 203 aaKnown RBP13.57□□□□□ -0.24
TDP1-206ENST00000553569 Q6ZVH6 145 aa13.57□□□□□ -0.24
TDP1-206ENST00000553569 A0A087X002 238 aa13.56□□□□□ -0.24
TDP1-206ENST00000553569 MUSTN1Q8IVN3 82 aa13.56□□□□□ -0.24
TDP1-206ENST00000553569 B5MCH6 92 aa13.55□□□□□ -0.24
TDP1-206ENST00000553569 ZNF73O43830 326 aaPredicted RBP13.53□□□□□ -0.24
TDP1-206ENST00000553569 CRYGAP11844 174 aa13.53□□□□□ -0.24
TDP1-206ENST00000553569 LINC00518Q8N0U6 118 aa13.53□□□□□ -0.24
TDP1-206ENST00000553569 SMCR5Q8TEV8 140 aa13.52□□□□□ -0.25
TDP1-206ENST00000553569 PAM16Q9Y3D7 125 aa13.52□□□□□ -0.25
TDP1-206ENST00000553569 CBY1Q9Y3M2 126 aa13.52□□□□□ -0.25
TDP1-206ENST00000553569 JOSD1Q15040 202 aaPredicted RBP13.51□□□□□ -0.25
TDP1-206ENST00000553569 PPDPFQ9H3Y8 114 aa13.51□□□□□ -0.25
TDP1-206ENST00000553569 COX8AP10176 69 aa13.5□□□□□ -0.25
TDP1-206ENST00000553569 Q6ZRX8 168 aa13.5□□□□□ -0.25
TDP1-206ENST00000553569 FAM229BQ4G0N7 80 aa13.49□□□□□ -0.25
TDP1-206ENST00000553569 SPATA45Q537H7 98 aa13.49□□□□□ -0.25
TDP1-206ENST00000553569 SPRR4Q96PI1 79 aa13.49□□□□□ -0.25
TDP1-206ENST00000553569 VAMP8Q9BV40 100 aa13.49□□□□□ -0.25
TDP1-206ENST00000553569 ZNF706Q9Y5V0 76 aaPredicted RBP13.49□□□□□ -0.25
TDP1-206ENST00000553569 TYMSOSQ8TAI1 123 aa13.48□□□□□ -0.25
TDP1-206ENST00000553569 Q9BRP9 147 aa13.48□□□□□ -0.25
TDP1-206ENST00000553569 A6NDN8 102 aa13.46□□□□□ -0.25
TDP1-206ENST00000553569 HINT1P49773 126 aaPredicted RBP13.46□□□□□ -0.25
TDP1-206ENST00000553569 KRTAP13-2Q52LG2 175 aa13.46□□□□□ -0.25
TDP1-206ENST00000553569 C14orf144Q96I85 54 aa13.46□□□□□ -0.25
TDP1-206ENST00000553569 ERC2-IT1O76042 136 aa13.45□□□□□ -0.26
TDP1-206ENST00000553569 DLEU1O43261 78 aa13.43□□□□□ -0.26
TDP1-206ENST00000553569 HIST1H4GQ99525 98 aa13.42□□□□□ -0.26
TDP1-206ENST00000553569 C6orf99Q4VX62 202 aa13.41□□□□□ -0.26
TDP1-206ENST00000553569 PYY3Q5JQD4 70 aa13.41□□□□□ -0.26
TDP1-206ENST00000553569 TRAV13-2A0A0B4J235 113 aa13.4□□□□□ -0.26
TDP1-206ENST00000553569 A4D1N5 150 aa13.4□□□□□ -0.26
TDP1-206ENST00000553569 GAGE2AQ6NT46 116 aa13.4□□□□□ -0.26
TDP1-206ENST00000553569 C3orf22Q8N5N4 141 aa13.4□□□□□ -0.26
TDP1-206ENST00000553569 COX7BP24311 80 aa13.38□□□□□ -0.27
TDP1-206ENST00000553569 SLC25A34Q6PIV7 304 aa13.38□□□□□ -0.27
TDP1-206ENST00000553569 HMCN2Q8NDA2 5059 aa13.37□□□□□ -0.27
TDP1-206ENST00000553569 ELOF1P60002 83 aaKnown RBP13.36□□□□□ -0.27
TDP1-206ENST00000553569 TSPAN13O95857 204 aa13.35□□□□□ -0.27
TDP1-206ENST00000553569 LINC00483Q53H64 154 aa13.35□□□□□ -0.27
TDP1-206ENST00000553569 C12orf57Q99622 126 aa13.35□□□□□ -0.27
TDP1-206ENST00000553569 ST20-AS1Q8NBB2 130 aa13.34□□□□□ -0.27
TDP1-206ENST00000553569 DHRS4-AS1Q9P1J3 65 aa13.34□□□□□ -0.27
TDP1-206ENST00000553569 C2orf91Q6ZV80 131 aa13.33□□□□□ -0.28
TDP1-206ENST00000553569 LINC00304Q8N9R0 145 aa13.33□□□□□ -0.28
TDP1-206ENST00000553569 SMIM11BQ8TCY0 68 aa13.33□□□□□ -0.28
TDP1-206ENST00000553569 HIGD1BQ9P298 99 aa13.33□□□□□ -0.28
TDP1-206ENST00000553569 TRBV7-6A0A0J9YX20 115 aa13.3□□□□□ -0.28
TDP1-206ENST00000553569 A0A1B0GWB2 263 aa13.3□□□□□ -0.28
TDP1-206ENST00000553569 IGLV9-49A0A0B4J1Y8 123 aa13.28□□□□□ -0.28
TDP1-206ENST00000553569 MOBPQ13875 183 aa13.26□□□□□ -0.29
TDP1-206ENST00000553569 Q8NBF4 154 aa13.24□□□□□ -0.29
TDP1-206ENST00000553569 TAL2Q16559 108 aa13.21□□□□□ -0.29
TDP1-206ENST00000553569 C9orf153Q5TBE3 101 aa13.21□□□□□ -0.29
TDP1-206ENST00000553569 CEND1Q8N111 149 aa13.21□□□□□ -0.29
TDP1-206ENST00000553569 CFC1BP0CG36 223 aa13.2□□□□□ -0.3
TDP1-206ENST00000553569 CFC1P0CG37 223 aa13.2□□□□□ -0.3
TDP1-206ENST00000553569 VAMP3Q15836 100 aa13.2□□□□□ -0.3
TDP1-206ENST00000553569 PRR4Q16378 134 aa13.2□□□□□ -0.3
TDP1-206ENST00000553569 DEFB105AQ8NG35 78 aa13.2□□□□□ -0.3
TDP1-206ENST00000553569 RAB37Q96AX2 223 aa13.2□□□□□ -0.3
TDP1-206ENST00000553569 H7C2G1 150 aa13.19□□□□□ -0.3
TDP1-206ENST00000553569 SPRR1BP22528 89 aa13.18□□□□□ -0.3
TDP1-206ENST00000553569 C4orf48Q5BLP8 95 aa13.18□□□□□ -0.3
TDP1-206ENST00000553569 NHP2Q9NX24 153 aaKnown RBP13.18□□□□□ -0.3
TDP1-206ENST00000553569 SPAG11AQ6PDA7 123 aa13.17□□□□□ -0.3
TDP1-206ENST00000553569 A0A0B4J2C4 111 aa13.16□□□□□ -0.3
TDP1-206ENST00000553569 TMEM238LA0A1B0GVL6 79 aa13.15□□□□□ -0.3
TDP1-206ENST00000553569 A6NJY4 79 aa13.15□□□□□ -0.3
TDP1-206ENST00000553569 SLC25A20O43772 301 aa13.15□□□□□ -0.3
TDP1-206ENST00000553569 FXYD2P54710 66 aa13.15□□□□□ -0.3
TDP1-206ENST00000553569 SSBP3-AS1Q7Z2R9 100 aa13.15□□□□□ -0.3
TDP1-206ENST00000553569 RETNLBQ9BQ08 111 aa13.15□□□□□ -0.3
TDP1-206ENST00000553569 UQCR10Q9UDW1 63 aa13.15□□□□□ -0.3
TDP1-206ENST00000553569 LAMTOR3Q9UHA4 124 aa13.14□□□□□ -0.31
TDP1-206ENST00000553569 TEX49A0A1B0GTD5 131 aa13.13□□□□□ -0.31
TDP1-206ENST00000553569 HSD52Q0P140 79 aa13.13□□□□□ -0.31
TDP1-206ENST00000553569 LINC00575Q6W349 94 aa13.13□□□□□ -0.31
TDP1-206ENST00000553569 Q1RN00 199 aa13.12□□□□□ -0.31
TDP1-206ENST00000553569 BVES-AS1Q5T3Y7 98 aa13.11□□□□□ -0.31
TDP1-206ENST00000553569 LINC01547P58512 204 aaPredicted RBP13.1□□□□□ -0.31
TDP1-206ENST00000553569 CTAG1AP78358 180 aa13.1□□□□□ -0.31
TDP1-206ENST00000553569 IGLV5-48A0A075B6I7 105 aa13.09□□□□□ -0.31
TDP1-206ENST00000553569 hADV29S1A0JD25 119 aa13.09□□□□□ -0.31
TDP1-206ENST00000553569 SPINK1P00995 79 aa13.07□□□□□ -0.32
TDP1-206ENST00000553569 PRO1854Q9UHT4 67 aa13.07□□□□□ -0.32
TDP1-206ENST00000553569 Q6ZQY7 126 aa13.06□□□□□ -0.32
TDP1-206ENST00000553569 PRO1933Q9H354 126 aa13.06□□□□□ -0.32
TDP1-206ENST00000553569 LRP2P98164 4655 aa13.05□□□□□ -0.32
TDP1-206ENST00000553569 SMIM29Q86T20 159 aa13.05□□□□□ -0.32
TDP1-206ENST00000553569 Q8N377 158 aa13.05□□□□□ -0.32
TDP1-206ENST00000553569 SMIM6P0DI80 62 aa13.03□□□□□ -0.32
TDP1-206ENST00000553569 K7ERJ3 54 aa13.02□□□□□ -0.33
TDP1-206ENST00000553569 HRCT1Q6UXD1 115 aa13□□□□□ -0.33
TDP1-206ENST00000553569 LPAP08519 4548 aa13□□□□□ -0.33
TDP1-206ENST00000553569 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.99□□□□□ -0.33
TDP1-206ENST00000553569 RPS29P62273 56 aaKnown RBP12.98□□□□□ -0.33
TDP1-206ENST00000553569 H0YGX0 51 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms