RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 COX8AP10176 69 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 LINC00158P58513 81 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 UBE2BP63146 152 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 BATFQ16520 125 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 PHF5AQ7RTV0 110 aaKnown RBP2.91□□□□□ -1.94
ATXN3-220ENST00000553491 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 PLAC8Q9NZF1 115 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 PKHD1P08F94 4074 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 FLG2Q5D862 2391 aaPredicted RBP2.9□□□□□ -1.94
ATXN3-220ENST00000553491 NDUFC2-KCTD14E9PQ53 114 aa2.9□□□□□ -1.95
ATXN3-220ENST00000553491 ZNF22P17026 224 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-220ENST00000553491 C1orf137Q5JT78 98 aa2.9□□□□□ -1.95
ATXN3-220ENST00000553491 BVES-AS1Q5T3Y7 98 aa2.9□□□□□ -1.95
ATXN3-220ENST00000553491 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
ATXN3-220ENST00000553491 TRAV12-1A0A0B4J245 112 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 A0A1B0GWB2 263 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 K7ERU9 68 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 M0QXV9 152 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 TAX1BP3O14907 124 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 DPM2O94777 84 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 CXCL5P42830 114 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 HINT1P49773 126 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-220ENST00000553491 HSD52Q0P140 79 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 CIRBPQ14011 172 aaKnown RBP2.89□□□□□ -1.95
ATXN3-220ENST00000553491 VAMP3Q15836 100 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 MEIG1Q5JSS6 88 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 C9orf129Q5T035 196 aaKnown RBP2.89□□□□□ -1.95
ATXN3-220ENST00000553491 NKAPP1Q8N9T2 125 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 HIGD1BQ9P298 99 aa2.89□□□□□ -1.95
ATXN3-220ENST00000553491 SRRM2Q9UQ35 2752 aaKnown RBP2.89□□□□□ -1.95
ATXN3-220ENST00000553491 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
ATXN3-220ENST00000553491 IGKCP01834 107 aa2.88□□□□□ -1.95
ATXN3-220ENST00000553491 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
ATXN3-220ENST00000553491 LGALS3P17931 250 aaKnown RBP2.88□□□□□ -1.95
ATXN3-220ENST00000553491 HERVK_113P61574 105 aa2.88□□□□□ -1.95
ATXN3-220ENST00000553491 TAL2Q16559 108 aa2.88□□□□□ -1.95
ATXN3-220ENST00000553491 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
ATXN3-220ENST00000553491 CEND1Q8N111 149 aa2.88□□□□□ -1.95
ATXN3-220ENST00000553491 ERG28Q9UKR5 140 aa2.88□□□□□ -1.95
ATXN3-220ENST00000553491 C22orf24Q9Y442 160 aa2.88□□□□□ -1.95
ATXN3-220ENST00000553491 MYMXA0A1B0GTQ4 84 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 LEPROTO15243 131 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 SMIM13P0DJ93 91 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 PLNP26678 52 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
ATXN3-220ENST00000553491 ATOH7Q8N100 152 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 MTURNQ8N3F0 131 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 NDUFA12Q9UI09 145 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 PSORS1C2Q9UIG4 136 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
ATXN3-220ENST00000553491 NPC2P61916 151 aa2.86□□□□□ -1.95
ATXN3-220ENST00000553491 OCIAD2Q56VL3 154 aa2.86□□□□□ -1.95
ATXN3-220ENST00000553491 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
ATXN3-220ENST00000553491 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
ATXN3-220ENST00000553491 LINC00167Q96N53 147 aa2.86□□□□□ -1.95
ATXN3-220ENST00000553491 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
ATXN3-220ENST00000553491 KIAA1109Q2LD37 5005 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 DYNC1H1Q14204 4646 aaKnown RBP2.85□□□□□ -1.95
ATXN3-220ENST00000553491 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 J3QQQ9 107 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 J3QR89 54 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 K7EP34 96 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 FABP2P12104 132 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 COX17Q14061 63 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 SFTA2Q6UW10 78 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 SPINK6Q6UWN8 80 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 MRPL55Q7Z7F7 128 aaKnown RBP2.85□□□□□ -1.95
ATXN3-220ENST00000553491 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 MIR7-3HGQ8N6C7 128 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 DAND5Q8N907 189 aa2.85□□□□□ -1.95
ATXN3-220ENST00000553491 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
ATXN3-220ENST00000553491 F8W1H4 67 aa2.84□□□□□ -1.95
ATXN3-220ENST00000553491 NCR3O14931 201 aa2.84□□□□□ -1.95
ATXN3-220ENST00000553491 OXTP01178 125 aa2.84□□□□□ -1.95
ATXN3-220ENST00000553491 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
ATXN3-220ENST00000553491 UBE2AP49459 152 aa2.84□□□□□ -1.95
ATXN3-220ENST00000553491 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.95
ATXN3-220ENST00000553491 DIRC1Q969H9 104 aa2.84□□□□□ -1.95
ATXN3-220ENST00000553491 DNAH5Q8TE73 4624 aa2.83□□□□□ -1.96
ATXN3-220ENST00000553491 ZNF815PA8K554 130 aa2.83□□□□□ -1.96
ATXN3-220ENST00000553491 KRTAP1-4P0C5Y4 121 aa2.83□□□□□ -1.96
ATXN3-220ENST00000553491 NMUP48645 174 aa2.83□□□□□ -1.96
ATXN3-220ENST00000553491 TSPEAR-AS2P59090 65 aa2.83□□□□□ -1.96
ATXN3-220ENST00000553491 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
ATXN3-220ENST00000553491 FAM19A1Q7Z5A9 133 aa2.83□□□□□ -1.96
ATXN3-220ENST00000553491 OR13C6PQ8NH95 151 aa2.83□□□□□ -1.96
ATXN3-220ENST00000553491 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
ATXN3-220ENST00000553491 HERC2O95714 4834 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 TMEM238C9JI98 176 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 H3BUT2 72 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 M0R378 163 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 RPL28P46779 137 aaKnown RBP2.82□□□□□ -1.96
ATXN3-220ENST00000553491 S100A7L2Q5SY68 101 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 SCGB1D4Q6XE38 83 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 TTTY13Q9BZ97 58 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms