RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 ZNF815PA8K554 130 aa4.01□□□□□ -1.77
DEPDC4-210ENST00000551642 CIRBPQ14011 172 aaKnown RBP4.01□□□□□ -1.77
DEPDC4-210ENST00000551642 ADAMTSL4-AS1Q5T5F5 129 aa4.01□□□□□ -1.77
DEPDC4-210ENST00000551642 Q6ZRP5 223 aa4.01□□□□□ -1.77
DEPDC4-210ENST00000551642 A0A096LNI7 61 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 A0A0J9YXY3 114 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 TIMM17BO60830 172 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 SMIM6P0DI80 62 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 COX8AP10176 69 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 PFN2P35080 140 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 RPL18AQ02543 176 aaKnown RBP4□□□□□ -1.77
DEPDC4-210ENST00000551642 SPATA45Q537H7 98 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 PCP2Q8IVA1 136 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 CIRBP-AS1Q8TBR5 109 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 SPACA4Q8TDM5 124 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 TTTY13Q9BZ97 58 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 PANO1I0J062 215 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 DLEU1O43261 78 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 SMIM13P0DJ93 91 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 RPL37AP61513 92 aaKnown RBP3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 MEIG1Q5JSS6 88 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 BOD1L2Q8IYS8 172 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 IGKV2-24A0A0C4DH68 120 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 LOC107984156A0A0G2JMH3 177 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 CHTF8P0CG12 524 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 LINC00158P58513 81 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 DSCR10P59022 87 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 S100A12P80511 92 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 UBE2V1Q13404 147 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 C9orf129Q5T035 196 aaKnown RBP3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 SCGB1D4Q6XE38 83 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 ARL17AQ8IVW1 177 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 SND1-IT1Q9HBX3 110 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 PLAC8Q9NZF1 115 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 TMEM238C9JI98 176 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 Q6ZVH6 145 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 MIR7-3HGQ8N6C7 128 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 C14orf144Q96I85 54 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 SPANXDQ9BXN6 97 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 PPDPFQ9H3Y8 114 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 XAGE1AQ9HD64 81 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 SPANXCQ9NY87 97 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 IGLV9-49A0A0B4J1Y8 123 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 A0A0U1RRA0 63 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 A0A1W2PNN7 141 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 SLC25A34Q6PIV7 304 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 DPH3Q96FX2 82 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 LINC01600Q96MT4 127 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 SPANXB1Q9NS25 103 aaPredicted RBP3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 HIGD1BQ9P298 99 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 USH2AO75445 5202 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 FAM168BA1KXE4 195 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 IFITM1P13164 125 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 DAND5Q8N907 189 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 LINC00308Q8TCZ7 52 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 COPS9Q8WXC6 57 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 C12orf57Q99622 126 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 MIEN1Q9BRT3 115 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 TP73-AS1Q9UF72 201 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 NDUFC2O95298 119 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 VPREB1P12018 145 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 SOSTDC1Q6X4U4 206 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 C2orf91Q6ZV80 131 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 FAM19A5Q7Z5A7 132 aaPredicted RBP3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 LINC00518Q8N0U6 118 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 UQCR10Q9UDW1 63 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 M0QXV9 152 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 SRSF9Q13242 221 aaKnown RBP eCLIP3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 TAL2Q16559 108 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 Q8NDZ9 215 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 IGLV7-46A0A075B6I9 117 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 M0R378 163 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 NPC2P61916 151 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 LBHQ53QV2 105 aaPredicted RBP3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 MRPL55Q7Z7F7 128 aaKnown RBP3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 MUSTN1Q8IVN3 82 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 NKAPP1Q8N9T2 125 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 HIST1H4GQ99525 98 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 TSTD3H0UI37 97 aa3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 PHF5AQ7RTV0 110 aaKnown RBP3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 C7orf33Q8WU49 177 aa3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 LINC00167Q96N53 147 aa3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 PRO1933Q9H354 126 aa3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 IGKV2-28A0A075B6P5 120 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 NCR3O14931 201 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 IGKV2D-28P01615 120 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 PRR3P79522 188 aaKnown RBP3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 CEND1Q8N111 149 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 A4D1N5 150 aa3.89□□□□□ -1.79
DEPDC4-210ENST00000551642 IGLV6-57P01721 117 aa3.89□□□□□ -1.79
DEPDC4-210ENST00000551642 HSD52Q0P140 79 aa3.89□□□□□ -1.79
DEPDC4-210ENST00000551642 TRBV10-3A0A0K0K1G6 114 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms