RNA–Protein interactions for RNA: ENST00000551630.1

PTCH1-224, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-224ENST00000551630 DIRC1Q969H9 104 aa9.28□□□□□ -0.92
PTCH1-224ENST00000551630 A4D1N5 150 aa9.27□□□□□ -0.93
PTCH1-224ENST00000551630 H0Y9J4 135 aa9.27□□□□□ -0.93
PTCH1-224ENST00000551630 SMIM6P0DI80 62 aa9.27□□□□□ -0.93
PTCH1-224ENST00000551630 SPRR1AP35321 89 aa9.27□□□□□ -0.93
PTCH1-224ENST00000551630 MYCBP2O75592 4640 aa9.27□□□□□ -0.93
PTCH1-224ENST00000551630 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
PTCH1-224ENST00000551630 KRTAP4-16G5E9R7 235 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-224ENST00000551630 C12orf57Q99622 126 aa9.25□□□□□ -0.93
PTCH1-224ENST00000551630 FAT3Q8TDW7 4589 aa9.25□□□□□ -0.93
PTCH1-224ENST00000551630 A6NDN8 102 aa9.24□□□□□ -0.93
PTCH1-224ENST00000551630 UQCR10Q9UDW1 63 aa9.24□□□□□ -0.93
PTCH1-224ENST00000551630 LRP1Q07954 4544 aaKnown RBP9.23□□□□□ -0.93
PTCH1-224ENST00000551630 ZNF73O43830 326 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-224ENST00000551630 PRO1933Q9H354 126 aa9.23□□□□□ -0.93
PTCH1-224ENST00000551630 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
PTCH1-224ENST00000551630 TRAV13-2A0A0B4J235 113 aa9.21□□□□□ -0.94
PTCH1-224ENST00000551630 KRTAP29-1A8MX34 341 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-224ENST00000551630 B5MCH6 92 aa9.21□□□□□ -0.94
PTCH1-224ENST00000551630 CBY1Q9Y3M2 126 aa9.21□□□□□ -0.94
PTCH1-224ENST00000551630 OXTP01178 125 aa9.2□□□□□ -0.94
PTCH1-224ENST00000551630 TAL2Q16559 108 aa9.2□□□□□ -0.94
PTCH1-224ENST00000551630 CEND1Q8N111 149 aa9.2□□□□□ -0.94
PTCH1-224ENST00000551630 KRTAP1-4P0C5Y4 121 aa9.19□□□□□ -0.94
PTCH1-224ENST00000551630 C6orf99Q4VX62 202 aa9.19□□□□□ -0.94
PTCH1-224ENST00000551630 FXYD2P54710 66 aa9.18□□□□□ -0.94
PTCH1-224ENST00000551630 HSD52Q0P140 79 aa9.18□□□□□ -0.94
PTCH1-224ENST00000551630 Q6ZRX8 168 aa9.18□□□□□ -0.94
PTCH1-224ENST00000551630 SMCR5Q8TEV8 140 aa9.18□□□□□ -0.94
PTCH1-224ENST00000551630 J3QL48 77 aa9.17□□□□□ -0.94
PTCH1-224ENST00000551630 RPL13AP40429 203 aaKnown RBP9.17□□□□□ -0.94
PTCH1-224ENST00000551630 SMIM11BQ8TCY0 68 aa9.17□□□□□ -0.94
PTCH1-224ENST00000551630 LINC01600Q96MT4 127 aa9.17□□□□□ -0.94
PTCH1-224ENST00000551630 Q9BRP9 147 aa9.17□□□□□ -0.94
PTCH1-224ENST00000551630 CFC1BP0CG36 223 aa9.16□□□□□ -0.94
PTCH1-224ENST00000551630 CFC1P0CG37 223 aa9.16□□□□□ -0.94
PTCH1-224ENST00000551630 HINT1P49773 126 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-224ENST00000551630 ERC2-IT1O76042 136 aa9.15□□□□□ -0.94
PTCH1-224ENST00000551630 MT1HL1P0DM35 61 aa9.15□□□□□ -0.94
PTCH1-224ENST00000551630 COX7BP24311 80 aa9.15□□□□□ -0.94
PTCH1-224ENST00000551630 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.94
PTCH1-224ENST00000551630 A0A0B4J2C4 111 aa9.14□□□□□ -0.95
PTCH1-224ENST00000551630 ELOF1P60002 83 aaKnown RBP9.14□□□□□ -0.95
PTCH1-224ENST00000551630 RAB37Q96AX2 223 aa9.14□□□□□ -0.95
PTCH1-224ENST00000551630 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
PTCH1-224ENST00000551630 A6NJY4 79 aa9.13□□□□□ -0.95
PTCH1-224ENST00000551630 H7C2G1 150 aa9.13□□□□□ -0.95
PTCH1-224ENST00000551630 PRR26Q8N8Z3 221 aa9.13□□□□□ -0.95
PTCH1-224ENST00000551630 SPRR4Q96PI1 79 aa9.12□□□□□ -0.95
PTCH1-224ENST00000551630 TNXBP22105 4242 aa9.1□□□□□ -0.95
PTCH1-224ENST00000551630 A0A1B0GWB2 263 aa9.1□□□□□ -0.95
PTCH1-224ENST00000551630 NHP2Q9NX24 153 aaKnown RBP9.1□□□□□ -0.95
PTCH1-224ENST00000551630 ZNF706Q9Y5V0 76 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-224ENST00000551630 A0A087X002 238 aa9.09□□□□□ -0.95
PTCH1-224ENST00000551630 TRBV7-6A0A0J9YX20 115 aa9.09□□□□□ -0.95
PTCH1-224ENST00000551630 K7ERJ3 54 aa9.09□□□□□ -0.95
PTCH1-224ENST00000551630 KRTAP10-8P60410 259 aa9.09□□□□□ -0.95
PTCH1-224ENST00000551630 TSTD3H0UI37 97 aa9.08□□□□□ -0.96
PTCH1-224ENST00000551630 CTAG1AP78358 180 aa9.08□□□□□ -0.96
PTCH1-224ENST00000551630 BVES-AS1Q5T3Y7 98 aa9.08□□□□□ -0.96
PTCH1-224ENST00000551630 ST20-AS1Q8NBB2 130 aa9.08□□□□□ -0.96
PTCH1-224ENST00000551630 DHRS4-AS1Q9P1J3 65 aa9.08□□□□□ -0.96
PTCH1-224ENST00000551630 GAGE2AQ6NT46 116 aa9.07□□□□□ -0.96
PTCH1-224ENST00000551630 PRO1854Q9UHT4 67 aa9.07□□□□□ -0.96
PTCH1-224ENST00000551630 CRYGAP11844 174 aa9.06□□□□□ -0.96
PTCH1-224ENST00000551630 Q1RN00 199 aa9.06□□□□□ -0.96
PTCH1-224ENST00000551630 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
PTCH1-224ENST00000551630 FAM229BQ4G0N7 80 aa9.05□□□□□ -0.96
PTCH1-224ENST00000551630 KRTAP13-2Q52LG2 175 aa9.05□□□□□ -0.96
PTCH1-224ENST00000551630 VAMP3Q15836 100 aa9.04□□□□□ -0.96
PTCH1-224ENST00000551630 LINC00483Q53H64 154 aa9.04□□□□□ -0.96
PTCH1-224ENST00000551630 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
PTCH1-224ENST00000551630 LINC00575Q6W349 94 aa9.02□□□□□ -0.97
PTCH1-224ENST00000551630 M0R143 59 aa9.01□□□□□ -0.97
PTCH1-224ENST00000551630 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
PTCH1-224ENST00000551630 SLC25A20O43772 301 aa9□□□□□ -0.97
PTCH1-224ENST00000551630 TRIAP1O43715 76 aa8.99□□□□□ -0.97
PTCH1-224ENST00000551630 TSPAN13O95857 204 aa8.99□□□□□ -0.97
PTCH1-224ENST00000551630 DEFB105AQ8NG35 78 aa8.99□□□□□ -0.97
PTCH1-224ENST00000551630 hADV29S1A0JD25 119 aa8.98□□□□□ -0.97
PTCH1-224ENST00000551630 IGLV9-49A0A0B4J1Y8 123 aa8.97□□□□□ -0.97
PTCH1-224ENST00000551630 FAM218AQ96MZ4 157 aa8.97□□□□□ -0.97
PTCH1-224ENST00000551630 HERC1Q15751 4861 aa8.97□□□□□ -0.97
PTCH1-224ENST00000551630 SPRR1BP22528 89 aa8.96□□□□□ -0.98
PTCH1-224ENST00000551630 PSMB2P49721 201 aa8.96□□□□□ -0.98
PTCH1-224ENST00000551630 LINC01547P58512 204 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-224ENST00000551630 BATFQ16520 125 aa8.96□□□□□ -0.98
PTCH1-224ENST00000551630 H0YGX0 51 aa8.95□□□□□ -0.98
PTCH1-224ENST00000551630 MOBPQ13875 183 aa8.95□□□□□ -0.98
PTCH1-224ENST00000551630 Q6ZQY7 126 aa8.95□□□□□ -0.98
PTCH1-224ENST00000551630 IGLV5-48A0A075B6I7 105 aa8.94□□□□□ -0.98
PTCH1-224ENST00000551630 TEX49A0A1B0GTD5 131 aa8.93□□□□□ -0.98
PTCH1-224ENST00000551630 C9orf153Q5TBE3 101 aa8.93□□□□□ -0.98
PTCH1-224ENST00000551630 CLEC2BQ92478 149 aa8.93□□□□□ -0.98
PTCH1-224ENST00000551630 Q8N377 158 aa8.92□□□□□ -0.98
PTCH1-224ENST00000551630 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-224ENST00000551630 SMIM29Q86T20 159 aa8.91□□□□□ -0.98
PTCH1-224ENST00000551630 LINC00304Q8N9R0 145 aa8.91□□□□□ -0.98
PTCH1-224ENST00000551630 Q8NBF4 154 aa8.91□□□□□ -0.98
PTCH1-224ENST00000551630 LAMTOR3Q9UHA4 124 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms