RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 TRBV25-1A0A075B6N4 114 aa-1.21□□□□□ -2.6
SCAF11-215ENST00000551391 TMEM203Q969S6 136 aa-1.21□□□□□ -2.6
SCAF11-215ENST00000551391 C2orf88Q9BSF0 95 aa-1.21□□□□□ -2.6
SCAF11-215ENST00000551391 SHPRHQ149N8 1683 aa-1.21□□□□□ -2.6
SCAF11-215ENST00000551391 hADV29S1A0JD25 119 aa-1.22□□□□□ -2.6
SCAF11-215ENST00000551391 PMCHL1Q16048 86 aa-1.22□□□□□ -2.6
SCAF11-215ENST00000551391 CACFD1Q9UGQ2 172 aa-1.22□□□□□ -2.6
SCAF11-215ENST00000551391 TEX15Q9BXT5 2789 aa-1.22□□□□□ -2.61
SCAF11-215ENST00000551391 KNDC1Q76NI1 1749 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 MT1EP04732 61 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 C3orf79P0CE67 100 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 IGLC2P0DOY2 106 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 IGLC3P0DOY3 106 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 COX7BP24311 80 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 ASIPP42127 132 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 RPL38P63173 70 aaKnown RBP-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 MRPS10P82664 201 aaKnown RBP-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 GNG8Q9UK08 70 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 UBE2D4Q9Y2X8 147 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 CELSR3Q9NYQ7 3312 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 PREX1Q8TCU6 1659 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 ABCA3Q99758 1704 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 FRYQ5TBA9 3013 aa-1.23□□□□□ -2.61
SCAF11-215ENST00000551391 ABCC2Q92887 1545 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 FAM135AQ9P2D6 1515 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 CSMD1Q96PZ7 3565 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 NBEAQ8NFP9 2946 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 PLXNC1O60486 1568 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 ALKQ9UM73 1620 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 NDUFC1O43677 76 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 MPC2O95563 127 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 ALKAL2Q6UX46 152 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 USP9XQ93008 2570 aaPredicted RBP-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 A0A0C4DFX4 3053 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 LRRC9Q6ZRR7 1453 aa-1.24□□□□□ -2.61
SCAF11-215ENST00000551391 UTP20O75691 2785 aaKnown RBP-1.25□□□□□ -2.61
SCAF11-215ENST00000551391 ABCA13Q86UQ4 5058 aa-1.25□□□□□ -2.61
SCAF11-215ENST00000551391 SMR3BP02814 79 aaPredicted RBP-1.25□□□□□ -2.61
SCAF11-215ENST00000551391 HMGN3Q15651 99 aa-1.25□□□□□ -2.61
SCAF11-215ENST00000551391 GTF2H5Q6ZYL4 71 aa-1.25□□□□□ -2.61
SCAF11-215ENST00000551391 PRO3102Q9H379 93 aa-1.25□□□□□ -2.61
SCAF11-215ENST00000551391 DSPP15924 2871 aaKnown RBP-1.25□□□□□ -2.61
SCAF11-215ENST00000551391 ANKRD36A6QL64 1941 aa-1.26□□□□□ -2.61
SCAF11-215ENST00000551391 UQCRHP07919 91 aa-1.26□□□□□ -2.61
SCAF11-215ENST00000551391 LINC00158P58513 81 aa-1.26□□□□□ -2.61
SCAF11-215ENST00000551391 MLH3Q9UHC1 1453 aa-1.26□□□□□ -2.61
SCAF11-215ENST00000551391 GCN1Q92616 2671 aaKnown RBP-1.26□□□□□ -2.61
SCAF11-215ENST00000551391 DNAH17Q9UFH2 4485 aa-1.27□□□□□ -2.61
SCAF11-215ENST00000551391 TRGV9Q99603 122 aa-1.27□□□□□ -2.61
SCAF11-215ENST00000551391 RAPGEF2Q9Y4G8 1499 aa-1.27□□□□□ -2.61
SCAF11-215ENST00000551391 COL14A1Q05707 1796 aaKnown RBP-1.28□□□□□ -2.61
SCAF11-215ENST00000551391 PRDM15P57071 1507 aaPredicted RBP-1.28□□□□□ -2.61
SCAF11-215ENST00000551391 TMEM218A2RU14 115 aa-1.28□□□□□ -2.61
SCAF11-215ENST00000551391 D6R8Y8 96 aa-1.28□□□□□ -2.61
SCAF11-215ENST00000551391 CLPSL2Q6UWE3 100 aa-1.28□□□□□ -2.61
SCAF11-215ENST00000551391 MUSTN1Q8IVN3 82 aa-1.28□□□□□ -2.61
SCAF11-215ENST00000551391 MT1LQ93083 61 aa-1.28□□□□□ -2.61
SCAF11-215ENST00000551391 NRXN1Q9ULB1 1477 aa-1.29□□□□□ -2.62
SCAF11-215ENST00000551391 EYSQ5T1H1 3165 aa-1.29□□□□□ -2.62
SCAF11-215ENST00000551391 LYNX1G3V0Z9 82 aa-1.29□□□□□ -2.62
SCAF11-215ENST00000551391 MTORP42345 2549 aa-1.29□□□□□ -2.62
SCAF11-215ENST00000551391 NBASA2RRP1 2371 aa-1.29□□□□□ -2.62
SCAF11-215ENST00000551391 WIZO95785 1651 aa-1.29□□□□□ -2.62
SCAF11-215ENST00000551391 CHD7Q9P2D1 2997 aa-1.29□□□□□ -2.62
SCAF11-215ENST00000551391 ZFYVE16Q7Z3T8 1539 aa-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 LINC00587B1AMM8 73 aa-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 ETDBQ3ZM63 59 aa-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 KRTAP8-1Q8IUC2 63 aa-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 DEFB106AQ8N104 65 aa-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 RGPD8O14715 1765 aaPredicted RBP-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 BCORQ6W2J9 1755 aa-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 RGPD5Q99666 1765 aa-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 MON2Q7Z3U7 1717 aa-1.3□□□□□ -2.62
SCAF11-215ENST00000551391 ANKRD36BQ8N2N9 1353 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 C5P01031 1676 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 LEPROTL1O95214 131 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 DEFB130BP0DP73 79 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 DEFB130AP0DP74 79 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 ZNF720Q7Z2F6 126 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 SERP2Q8N6R1 65 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 GAFA1Q96PS6 74 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 DEPDC5O75140 1603 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 USP32Q8NFA0 1604 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 MAGI3Q5TCQ9 1506 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 LRRC7Q96NW7 1537 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 ABCC10Q5T3U5 1492 aa-1.31□□□□□ -2.62
SCAF11-215ENST00000551391 A0A1B0GUT8 65 aa-1.32□□□□□ -2.62
SCAF11-215ENST00000551391 F8WEM9 126 aa-1.32□□□□□ -2.62
SCAF11-215ENST00000551391 C5orf42Q9H799 3197 aa-1.32□□□□□ -2.62
SCAF11-215ENST00000551391 DNAH10Q8IVF4 4471 aa-1.32□□□□□ -2.62
SCAF11-215ENST00000551391 C4AP0C0L4 1744 aa-1.32□□□□□ -2.62
SCAF11-215ENST00000551391 C4BP0C0L5 1744 aa-1.32□□□□□ -2.62
SCAF11-215ENST00000551391 DNAH5Q8TE73 4624 aa-1.32□□□□□ -2.62
SCAF11-215ENST00000551391 KNL1Q8NG31 2342 aa-1.33□□□□□ -2.62
SCAF11-215ENST00000551391 LCE6AA0A183 80 aa-1.33□□□□□ -2.62
SCAF11-215ENST00000551391 ATOX1O00244 68 aa-1.33□□□□□ -2.62
SCAF11-215ENST00000551391 GNGT2O14610 69 aa-1.33□□□□□ -2.62
SCAF11-215ENST00000551391 TNP1P09430 55 aa-1.33□□□□□ -2.62
SCAF11-215ENST00000551391 MT1MQ8N339 61 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms