RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 C3orf22Q8N5N4 141 aa11.04□□□□□ -0.64
DDX54-208ENST00000551344 TTTY13Q9BZ97 58 aa11.04□□□□□ -0.64
DDX54-208ENST00000551344 TRAV23DV6A0A075B6W5 121 aa11.03□□□□□ -0.64
DDX54-208ENST00000551344 Q6ZRX8 168 aa11.03□□□□□ -0.64
DDX54-208ENST00000551344 ZNF73O43830 326 aaPredicted RBP11.01□□□□□ -0.65
DDX54-208ENST00000551344 JOSD1Q15040 202 aaPredicted RBP11.01□□□□□ -0.65
DDX54-208ENST00000551344 LINC00483Q53H64 154 aa11.01□□□□□ -0.65
DDX54-208ENST00000551344 LPAP08519 4548 aa11.01□□□□□ -0.65
DDX54-208ENST00000551344 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
DDX54-208ENST00000551344 SPAG11AQ6PDA7 123 aa11□□□□□ -0.65
DDX54-208ENST00000551344 Q9BRP9 147 aa11□□□□□ -0.65
DDX54-208ENST00000551344 ERC2-IT1O76042 136 aa10.99□□□□□ -0.65
DDX54-208ENST00000551344 HINT1P49773 126 aaPredicted RBP10.99□□□□□ -0.65
DDX54-208ENST00000551344 SCGB1D4Q6XE38 83 aa10.99□□□□□ -0.65
DDX54-208ENST00000551344 LINC00518Q8N0U6 118 aa10.99□□□□□ -0.65
DDX54-208ENST00000551344 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
DDX54-208ENST00000551344 SNRPEP62304 92 aaKnown RBP10.98□□□□□ -0.65
DDX54-208ENST00000551344 GAGE2AQ6NT46 116 aa10.98□□□□□ -0.65
DDX54-208ENST00000551344 ATOH7Q8N100 152 aa10.98□□□□□ -0.65
DDX54-208ENST00000551344 OR13C6PQ8NH95 151 aa10.98□□□□□ -0.65
DDX54-208ENST00000551344 S100A2P29034 98 aa10.97□□□□□ -0.65
DDX54-208ENST00000551344 HIST3H2BBQ8N257 126 aa10.97□□□□□ -0.65
DDX54-208ENST00000551344 SPANXDQ9BXN6 97 aa10.97□□□□□ -0.65
DDX54-208ENST00000551344 C4orf48Q5BLP8 95 aa10.96□□□□□ -0.65
DDX54-208ENST00000551344 COPS9Q8WXC6 57 aa10.96□□□□□ -0.65
DDX54-208ENST00000551344 Q6ZVH6 145 aa10.95□□□□□ -0.66
DDX54-208ENST00000551344 HIST1H2BLQ99880 126 aa10.95□□□□□ -0.66
DDX54-208ENST00000551344 C5orf52A6NGY3 159 aa10.94□□□□□ -0.66
DDX54-208ENST00000551344 IFITM1P13164 125 aa10.94□□□□□ -0.66
DDX54-208ENST00000551344 S100A6P06703 90 aa10.93□□□□□ -0.66
DDX54-208ENST00000551344 PCP2Q8IVA1 136 aa10.93□□□□□ -0.66
DDX54-208ENST00000551344 SSBP3-AS1Q7Z2R9 100 aa10.92□□□□□ -0.66
DDX54-208ENST00000551344 Q8NBF4 154 aa10.92□□□□□ -0.66
DDX54-208ENST00000551344 RETNLBQ9BQ08 111 aa10.91□□□□□ -0.66
DDX54-208ENST00000551344 SPINK1P00995 79 aa10.89□□□□□ -0.67
DDX54-208ENST00000551344 MUSTN1Q8IVN3 82 aa10.88□□□□□ -0.67
DDX54-208ENST00000551344 DHRS4-AS1Q9P1J3 65 aa10.88□□□□□ -0.67
DDX54-208ENST00000551344 IGLV9-49A0A0B4J1Y8 123 aa10.87□□□□□ -0.67
DDX54-208ENST00000551344 HSBP1L1C9JCN9 74 aa10.87□□□□□ -0.67
DDX54-208ENST00000551344 MOBPQ13875 183 aa10.87□□□□□ -0.67
DDX54-208ENST00000551344 RNF213Q63HN8 5207 aa10.87□□□□□ -0.67
DDX54-208ENST00000551344 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
DDX54-208ENST00000551344 COX7BP24311 80 aa10.85□□□□□ -0.67
DDX54-208ENST00000551344 ELOF1P60002 83 aaKnown RBP10.85□□□□□ -0.67
DDX54-208ENST00000551344 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
DDX54-208ENST00000551344 ST20-AS1Q8NBB2 130 aa10.85□□□□□ -0.67
DDX54-208ENST00000551344 TRBV7-6A0A0J9YX20 115 aa10.84□□□□□ -0.67
DDX54-208ENST00000551344 A6NDN8 102 aa10.83□□□□□ -0.68
DDX54-208ENST00000551344 TPRXLQ17RH7 258 aa10.83□□□□□ -0.68
DDX54-208ENST00000551344 SPRR1BP22528 89 aa10.82□□□□□ -0.68
DDX54-208ENST00000551344 RPS29P62273 56 aaKnown RBP10.82□□□□□ -0.68
DDX54-208ENST00000551344 FP248Q71RG6 208 aaPredicted RBP10.82□□□□□ -0.68
DDX54-208ENST00000551344 SLC25A34Q6PIV7 304 aa10.81□□□□□ -0.68
DDX54-208ENST00000551344 TRAV13-2A0A0B4J235 113 aa10.8□□□□□ -0.68
DDX54-208ENST00000551344 A0A1B0GWB2 263 aa10.79□□□□□ -0.68
DDX54-208ENST00000551344 SCGB1D1O95968 90 aa10.79□□□□□ -0.68
DDX54-208ENST00000551344 C9orf153Q5TBE3 101 aa10.79□□□□□ -0.68
DDX54-208ENST00000551344 CDIP1Q9H305 208 aa10.78□□□□□ -0.68
DDX54-208ENST00000551344 A4D1N5 150 aa10.76□□□□□ -0.69
DDX54-208ENST00000551344 LAMTOR3Q9UHA4 124 aa10.76□□□□□ -0.69
DDX54-208ENST00000551344 TAL2Q16559 108 aa10.75□□□□□ -0.69
DDX54-208ENST00000551344 Q8N377 158 aa10.74□□□□□ -0.69
DDX54-208ENST00000551344 TEX49A0A1B0GTD5 131 aa10.73□□□□□ -0.69
DDX54-208ENST00000551344 SLC25A20O43772 301 aa10.73□□□□□ -0.69
DDX54-208ENST00000551344 SMIM11BQ8TCY0 68 aa10.73□□□□□ -0.69
DDX54-208ENST00000551344 DEFB105AQ8NG35 78 aa10.72□□□□□ -0.69
DDX54-208ENST00000551344 COX8AP10176 69 aa10.7□□□□□ -0.7
DDX54-208ENST00000551344 NHP2Q9NX24 153 aaKnown RBP10.7□□□□□ -0.7
DDX54-208ENST00000551344 VAMP3Q15836 100 aa10.69□□□□□ -0.7
DDX54-208ENST00000551344 IGLV5-48A0A075B6I7 105 aa10.68□□□□□ -0.7
DDX54-208ENST00000551344 DLEU1O43261 78 aa10.68□□□□□ -0.7
DDX54-208ENST00000551344 Q1RN00 199 aa10.67□□□□□ -0.7
DDX54-208ENST00000551344 KRTAP13-3Q3SY46 172 aa10.67□□□□□ -0.7
DDX54-208ENST00000551344 HIST1H4GQ99525 98 aa10.67□□□□□ -0.7
DDX54-208ENST00000551344 LINC01547P58512 204 aaPredicted RBP10.66□□□□□ -0.7
DDX54-208ENST00000551344 SMIM29Q86T20 159 aa10.65□□□□□ -0.7
DDX54-208ENST00000551344 PRO1933Q9H354 126 aa10.65□□□□□ -0.7
DDX54-208ENST00000551344 MUC2Q02817 5179 aa10.63□□□□□ -0.71
DDX54-208ENST00000551344 CD164Q04900 197 aa10.63□□□□□ -0.71
DDX54-208ENST00000551344 LIMD2Q9BT23 127 aa10.63□□□□□ -0.71
DDX54-208ENST00000551344 LINC00575Q6W349 94 aa10.62□□□□□ -0.71
DDX54-208ENST00000551344 A0A0U1RQV1 116 aa10.61□□□□□ -0.71
DDX54-208ENST00000551344 HRCT1Q6UXD1 115 aa10.61□□□□□ -0.71
DDX54-208ENST00000551344 C14orf144Q96I85 54 aa10.61□□□□□ -0.71
DDX54-208ENST00000551344 SPATA45Q537H7 98 aa10.6□□□□□ -0.71
DDX54-208ENST00000551344 PAM16Q9Y3D7 125 aa10.6□□□□□ -0.71
DDX54-208ENST00000551344 HIGD1BQ9P298 99 aa10.59□□□□□ -0.71
DDX54-208ENST00000551344 hADV29S1A0JD25 119 aa10.58□□□□□ -0.72
DDX54-208ENST00000551344 VAMP8Q9BV40 100 aa10.58□□□□□ -0.72
DDX54-208ENST00000551344 H7C2G1 150 aa10.57□□□□□ -0.72
DDX54-208ENST00000551344 BVES-AS1Q5T3Y7 98 aa10.57□□□□□ -0.72
DDX54-208ENST00000551344 C12orf57Q99622 126 aa10.57□□□□□ -0.72
DDX54-208ENST00000551344 Q5XG85 94 aa10.55□□□□□ -0.72
DDX54-208ENST00000551344 MUC17Q685J3 4493 aa10.54□□□□□ -0.72
DDX54-208ENST00000551344 CFC1BP0CG36 223 aa10.54□□□□□ -0.72
DDX54-208ENST00000551344 CFC1P0CG37 223 aa10.54□□□□□ -0.72
DDX54-208ENST00000551344 Q6ZQY7 126 aa10.54□□□□□ -0.72
DDX54-208ENST00000551344 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
DDX54-208ENST00000551344 F8WEM9 126 aa10.51□□□□□ -0.73
DDX54-208ENST00000551344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms