RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
NPAS3-209ENST00000551008 DDTP30046 118 aa7.45□□□□□ -1.22
NPAS3-209ENST00000551008 LINC01545Q5VT33 79 aa7.45□□□□□ -1.22
NPAS3-209ENST00000551008 PPDPFQ9H3Y8 114 aa7.45□□□□□ -1.22
NPAS3-209ENST00000551008 SPANXB1Q9NS25 103 aaPredicted RBP7.45□□□□□ -1.22
NPAS3-209ENST00000551008 H3BS24 57 aa7.44□□□□□ -1.22
NPAS3-209ENST00000551008 NDUFC2O95298 119 aa7.44□□□□□ -1.22
NPAS3-209ENST00000551008 NPC2P61916 151 aa7.44□□□□□ -1.22
NPAS3-209ENST00000551008 CTAG1AP78358 180 aa7.43□□□□□ -1.22
NPAS3-209ENST00000551008 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
NPAS3-209ENST00000551008 Q6ZRX8 168 aa7.42□□□□□ -1.22
NPAS3-209ENST00000551008 Q8NBF4 154 aa7.42□□□□□ -1.22
NPAS3-209ENST00000551008 TTTY13Q9BZ97 58 aa7.42□□□□□ -1.22
NPAS3-209ENST00000551008 C3orf79P0CE67 100 aa7.41□□□□□ -1.22
NPAS3-209ENST00000551008 TPRXLQ17RH7 258 aa7.41□□□□□ -1.22
NPAS3-209ENST00000551008 COA6Q5JTJ3 125 aaKnown RBP7.41□□□□□ -1.22
NPAS3-209ENST00000551008 IGLV7-46A0A075B6I9 117 aa7.4□□□□□ -1.22
NPAS3-209ENST00000551008 PET117Q6UWS5 81 aa7.4□□□□□ -1.22
NPAS3-209ENST00000551008 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
NPAS3-209ENST00000551008 GAGE2AQ6NT46 116 aa7.39□□□□□ -1.23
NPAS3-209ENST00000551008 SPAG11AQ6PDA7 123 aa7.39□□□□□ -1.23
NPAS3-209ENST00000551008 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
NPAS3-209ENST00000551008 MIEN1Q9BRT3 115 aa7.39□□□□□ -1.23
NPAS3-209ENST00000551008 TIMM17BO60830 172 aa7.38□□□□□ -1.23
NPAS3-209ENST00000551008 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
NPAS3-209ENST00000551008 ZNF73O43830 326 aaPredicted RBP7.36□□□□□ -1.23
NPAS3-209ENST00000551008 MOBPQ13875 183 aa7.36□□□□□ -1.23
NPAS3-209ENST00000551008 S100A7L2Q5SY68 101 aa7.36□□□□□ -1.23
NPAS3-209ENST00000551008 ST20-AS1Q8NBB2 130 aa7.36□□□□□ -1.23
NPAS3-209ENST00000551008 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
NPAS3-209ENST00000551008 SPANXCQ9NY87 97 aa7.35□□□□□ -1.23
NPAS3-209ENST00000551008 IGLV9-49A0A0B4J1Y8 123 aa7.34□□□□□ -1.23
NPAS3-209ENST00000551008 S100A12P80511 92 aa7.34□□□□□ -1.23
NPAS3-209ENST00000551008 SPINK1P00995 79 aa7.33□□□□□ -1.24
NPAS3-209ENST00000551008 KRTDAPP60985 99 aa7.33□□□□□ -1.24
NPAS3-209ENST00000551008 KRTAP13-3Q3SY46 172 aa7.33□□□□□ -1.24
NPAS3-209ENST00000551008 FP248Q71RG6 208 aaPredicted RBP7.33□□□□□ -1.24
NPAS3-209ENST00000551008 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
NPAS3-209ENST00000551008 Q8N377 158 aa7.32□□□□□ -1.24
NPAS3-209ENST00000551008 CDIP1Q9H305 208 aa7.32□□□□□ -1.24
NPAS3-209ENST00000551008 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
NPAS3-209ENST00000551008 ATOH7Q8N100 152 aa7.31□□□□□ -1.24
NPAS3-209ENST00000551008 JOSD1Q15040 202 aaPredicted RBP7.3□□□□□ -1.24
NPAS3-209ENST00000551008 SPANXDQ9BXN6 97 aa7.3□□□□□ -1.24
NPAS3-209ENST00000551008 SPRR1BP22528 89 aa7.29□□□□□ -1.24
NPAS3-209ENST00000551008 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
NPAS3-209ENST00000551008 PCP2Q8IVA1 136 aa7.29□□□□□ -1.24
NPAS3-209ENST00000551008 ELOF1P60002 83 aaKnown RBP7.28□□□□□ -1.24
NPAS3-209ENST00000551008 OR13C6PQ8NH95 151 aa7.28□□□□□ -1.24
NPAS3-209ENST00000551008 C5orf52A6NGY3 159 aa7.27□□□□□ -1.25
NPAS3-209ENST00000551008 C6orf99Q4VX62 202 aa7.27□□□□□ -1.25
NPAS3-209ENST00000551008 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
NPAS3-209ENST00000551008 C9orf153Q5TBE3 101 aa7.25□□□□□ -1.25
NPAS3-209ENST00000551008 C20orf202A1L168 122 aa7.24□□□□□ -1.25
NPAS3-209ENST00000551008 COX7BP24311 80 aa7.24□□□□□ -1.25
NPAS3-209ENST00000551008 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
NPAS3-209ENST00000551008 LINC00518Q8N0U6 118 aa7.24□□□□□ -1.25
NPAS3-209ENST00000551008 HIST3H2BBQ8N257 126 aa7.24□□□□□ -1.25
NPAS3-209ENST00000551008 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
NPAS3-209ENST00000551008 DHRS4-AS1Q9P1J3 65 aa7.24□□□□□ -1.25
NPAS3-209ENST00000551008 CBY1Q9Y3M2 126 aa7.24□□□□□ -1.25
NPAS3-209ENST00000551008 LINC01547P58512 204 aaPredicted RBP7.23□□□□□ -1.25
NPAS3-209ENST00000551008 MUSTN1Q8IVN3 82 aa7.23□□□□□ -1.25
NPAS3-209ENST00000551008 HIST1H2BLQ99880 126 aa7.23□□□□□ -1.25
NPAS3-209ENST00000551008 SLC25A20O43772 301 aa7.22□□□□□ -1.25
NPAS3-209ENST00000551008 IFITM1P13164 125 aa7.22□□□□□ -1.25
NPAS3-209ENST00000551008 HINT1P49773 126 aaPredicted RBP7.22□□□□□ -1.25
NPAS3-209ENST00000551008 ASB16-AS1Q495Z4 193 aa7.22□□□□□ -1.25
NPAS3-209ENST00000551008 A0A0U1RQV1 116 aa7.21□□□□□ -1.26
NPAS3-209ENST00000551008 SMIM29Q86T20 159 aa7.21□□□□□ -1.26
NPAS3-209ENST00000551008 TRBV7-6A0A0J9YX20 115 aa7.2□□□□□ -1.26
NPAS3-209ENST00000551008 Q6ZVH6 145 aa7.2□□□□□ -1.26
NPAS3-209ENST00000551008 IGLV5-48A0A075B6I7 105 aa7.18□□□□□ -1.26
NPAS3-209ENST00000551008 Q1RN00 199 aa7.18□□□□□ -1.26
NPAS3-209ENST00000551008 A0A1B0GWB2 263 aa7.17□□□□□ -1.26
NPAS3-209ENST00000551008 A6NDN8 102 aa7.17□□□□□ -1.26
NPAS3-209ENST00000551008 HRCT1Q6UXD1 115 aa7.17□□□□□ -1.26
NPAS3-209ENST00000551008 DEFB105AQ8NG35 78 aa7.17□□□□□ -1.26
NPAS3-209ENST00000551008 SMIM11BQ8TCY0 68 aa7.17□□□□□ -1.26
NPAS3-209ENST00000551008 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
NPAS3-209ENST00000551008 SNRPEP62304 92 aaKnown RBP7.16□□□□□ -1.26
NPAS3-209ENST00000551008 LAMTOR3Q9UHA4 124 aa7.16□□□□□ -1.26
NPAS3-209ENST00000551008 TEX49A0A1B0GTD5 131 aa7.15□□□□□ -1.26
NPAS3-209ENST00000551008 AKR1D1P51857 326 aa7.15□□□□□ -1.26
NPAS3-209ENST00000551008 TAL2Q16559 108 aa7.15□□□□□ -1.26
NPAS3-209ENST00000551008 SLC25A34Q6PIV7 304 aa7.15□□□□□ -1.26
NPAS3-209ENST00000551008 COPS9Q8WXC6 57 aa7.15□□□□□ -1.26
NPAS3-209ENST00000551008 TRAV13-2A0A0B4J235 113 aa7.12□□□□□ -1.27
NPAS3-209ENST00000551008 A4D1N5 150 aa7.12□□□□□ -1.27
NPAS3-209ENST00000551008 S100A1P23297 94 aa7.12□□□□□ -1.27
NPAS3-209ENST00000551008 S100A2P29034 98 aa7.12□□□□□ -1.27
NPAS3-209ENST00000551008 CD164Q04900 197 aa7.12□□□□□ -1.27
NPAS3-209ENST00000551008 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
NPAS3-209ENST00000551008 LIMD2Q9BT23 127 aa7.11□□□□□ -1.27
NPAS3-209ENST00000551008 KRTAP9-2Q9BYQ4 174 aa7.11□□□□□ -1.27
NPAS3-209ENST00000551008 PRO1933Q9H354 126 aa7.11□□□□□ -1.27
NPAS3-209ENST00000551008 H7C2G1 150 aa7.1□□□□□ -1.27
NPAS3-209ENST00000551008 Q5XG85 94 aa7.1□□□□□ -1.27
NPAS3-209ENST00000551008 KRTAP19-2Q3LHN2 52 aa7.09□□□□□ -1.27
NPAS3-209ENST00000551008 C1orf195Q5TG92 126 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms