RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 TRAV26-2A0A0B4J265 109 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 MUC21A0A140T8X8 626 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 FAM240AA0A1B0GVK7 77 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 A0A1B0GWB2 263 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 C9JQL5 133 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 UQCRQO14949 82 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 APOMO95445 188 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 NCR2O95944 276 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 MT-ATP8P03928 68 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 FAM19A1Q7Z5A9 133 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 KRTAP11-1Q8IUC1 163 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 C3orf22Q8N5N4 141 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 CHCHD10Q8WYQ3 142 aaPredicted RBP2.09□□□□□ -2.07
LIMA1-206ENST00000550611 DIRC1Q969H9 104 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 MANBALQ9NQG1 85 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 IGLV8-61A0A075B6I0 122 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 TRAV13-1A0A0B4J241 112 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 IGHV1-58A0A0C4DH39 117 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 H0Y9J4 135 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 H3BMG7 143 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 IGLV7-43P04211 117 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 SRP19P09132 144 aaKnown RBP2.08□□□□□ -2.08
LIMA1-206ENST00000550611 TMEM258P61165 79 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 CACNG7P62955 275 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 C9orf116Q5BN46 136 aaPredicted RBP2.08□□□□□ -2.08
LIMA1-206ENST00000550611 SPANXN1Q5VSR9 72 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 TMEM136Q6ZRR5 245 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 NUP35Q8NFH5 326 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 FAM213BQ8TBF2 198 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 PPDPFLQ8WWR9 84 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 LINC00526Q96FQ7 95 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 PRELID3AQ96N28 172 aa2.08□□□□□ -2.08
LIMA1-206ENST00000550611 TRAV9-1A0A075B6T8 112 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 CTXND1A0A1B0GTU2 59 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 LINC00959A0A1B0GUT2 108 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 FGF6P10767 208 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 PFN2P35080 140 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 FOXA3P55318 350 aaPredicted RBP2.07□□□□□ -2.08
LIMA1-206ENST00000550611 UBE2G1P62253 170 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 SYCNQ0VAF6 134 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 ETDBQ3ZM63 59 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 C1orf137Q5JT78 98 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 PHF5AQ7RTV0 110 aaKnown RBP2.07□□□□□ -2.08
LIMA1-206ENST00000550611 ATOH7Q8N100 152 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 CARD19Q96LW7 228 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 CYTL1Q9NRR1 136 aa2.07□□□□□ -2.08
LIMA1-206ENST00000550611 IGLV4-69A0A075B6H9 119 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 SMIM26A0A096LP01 95 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 IGKV3OR2-268A0A0C4DH90 116 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 FAM236AA0A1B0GUQ0 79 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 FAM236BA0A1B0GV22 79 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 FAM168BA1KXE4 195 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 C19orf71A6NCJ1 209 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 SYS1-DBNDD2H3BUS1 97 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 J3QQQ9 107 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 UBE2L6O14933 153 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 SCGB1C2P0DMR2 95 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 XCL1P47992 114 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 RPL7L1Q6DKI1 246 aaKnown RBP2.06□□□□□ -2.08
LIMA1-206ENST00000550611 C20orf78Q9BR46 151 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 IMUPQ9GZP8 106 aa2.06□□□□□ -2.08
LIMA1-206ENST00000550611 RPP21Q9H633 154 aaKnown RBP2.06□□□□□ -2.08
LIMA1-206ENST00000550611 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.05□□□□□ -2.08
LIMA1-206ENST00000550611 TRAV1-1A0A0B4J248 108 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 IGKV2-29A2NJV5 120 aaPredicted RBP2.05□□□□□ -2.08
LIMA1-206ENST00000550611 A8MWL6 223 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 NDUFC2-KCTD14E9PQ53 114 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 F2Z2F3 143 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 SERF1AO75920 110 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 MGPP08493 103 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 C3orf79P0CE67 100 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 CRYGAP11844 174 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 CXCL5P42830 114 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 LINC01545Q5VT33 79 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 BRK1Q8WUW1 75 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 GNB1LQ9BYB4 327 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 CNFNQ9BYD5 112 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 CDC42SE2Q9NRR3 84 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 GNG13Q9P2W3 67 aa2.05□□□□□ -2.08
LIMA1-206ENST00000550611 TRBV6-5A0A0K0K1A5 114 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 TLX1NBP0CAT3 122 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 COX8AP10176 69 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 COX7CP15954 63 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 NMUP48645 174 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 MRPS36P82909 103 aaKnown RBP2.04□□□□□ -2.08
LIMA1-206ENST00000550611 RPL18AQ02543 176 aaKnown RBP2.04□□□□□ -2.08
LIMA1-206ENST00000550611 TPRXLQ17RH7 258 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 Q5XG85 94 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 LYZL1Q6UWQ5 148 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 TEN1Q86WV5 123 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 AMN1Q8IY45 258 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 MRPL35Q9NZE8 188 aaKnown RBP2.04□□□□□ -2.08
LIMA1-206ENST00000550611 SERP1Q9Y6X1 66 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
LIMA1-206ENST00000550611 SDHAF1A6NFY7 115 aa2.03□□□□□ -2.08
LIMA1-206ENST00000550611 SMKR1H3BMG3 65 aa2.03□□□□□ -2.08
LIMA1-206ENST00000550611 ATOX1O00244 68 aa2.03□□□□□ -2.08
LIMA1-206ENST00000550611 COX7A2LO14548 114 aa2.03□□□□□ -2.08
LIMA1-206ENST00000550611 NUPR1O60356 82 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms