RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 S100A7L2Q5SY68 101 aa6.08□□□□□ -1.44
CCDC38-207ENST00000549752 GAGE2AQ6NT46 116 aa6.08□□□□□ -1.44
CCDC38-207ENST00000549752 PMCHL2Q9BQD1 86 aa6.08□□□□□ -1.44
CCDC38-207ENST00000549752 E9PLD3 99 aa6.07□□□□□ -1.44
CCDC38-207ENST00000549752 SYS1-DBNDD2H3BUS1 97 aa6.07□□□□□ -1.44
CCDC38-207ENST00000549752 DAND5Q8N907 189 aa6.07□□□□□ -1.44
CCDC38-207ENST00000549752 SMCR5Q8TEV8 140 aa6.07□□□□□ -1.44
CCDC38-207ENST00000549752 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST1H2BKO60814 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST1H2BJP06899 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST1H2BOP23527 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST1H2BBP33778 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST1H2BDP58876 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST1H2BCP62807 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 JOSD1Q15040 202 aaPredicted RBP6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST2H2BEQ16778 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST1H2BHQ93079 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST1H2BNQ99877 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 HIST1H2BMQ99879 126 aa6.06□□□□□ -1.44
CCDC38-207ENST00000549752 A0A0J9YXY3 114 aa6.05□□□□□ -1.44
CCDC38-207ENST00000549752 HINT1P49773 126 aaPredicted RBP6.05□□□□□ -1.44
CCDC38-207ENST00000549752 LINC01545Q5VT33 79 aa6.04□□□□□ -1.44
CCDC38-207ENST00000549752 C3orf22Q8N5N4 141 aa6.04□□□□□ -1.44
CCDC38-207ENST00000549752 TRAV23DV6A0A075B6W5 121 aa6.03□□□□□ -1.44
CCDC38-207ENST00000549752 A0A0U1RQV1 116 aa6.03□□□□□ -1.44
CCDC38-207ENST00000549752 TIMM17BO60830 172 aa6.03□□□□□ -1.44
CCDC38-207ENST00000549752 IGLV6-57P01721 117 aa6.03□□□□□ -1.44
CCDC38-207ENST00000549752 AKR1D1P51857 326 aa6.03□□□□□ -1.44
CCDC38-207ENST00000549752 Q6ZRX8 168 aa6.03□□□□□ -1.44
CCDC38-207ENST00000549752 C20orf202A1L168 122 aa6.02□□□□□ -1.45
CCDC38-207ENST00000549752 SPINK1P00995 79 aa6.02□□□□□ -1.45
CCDC38-207ENST00000549752 UBE2V1Q13404 147 aa6.02□□□□□ -1.45
CCDC38-207ENST00000549752 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
CCDC38-207ENST00000549752 LINC00483Q53H64 154 aa6.02□□□□□ -1.45
CCDC38-207ENST00000549752 SPANXCQ9NY87 97 aa6.02□□□□□ -1.45
CCDC38-207ENST00000549752 IGLV7-46A0A075B6I9 117 aa6.01□□□□□ -1.45
CCDC38-207ENST00000549752 C5orf52A6NGY3 159 aa6.01□□□□□ -1.45
CCDC38-207ENST00000549752 ZNF815PA8K554 130 aa6.01□□□□□ -1.45
CCDC38-207ENST00000549752 ZNF73O43830 326 aaPredicted RBP6.01□□□□□ -1.45
CCDC38-207ENST00000549752 NPC2P61916 151 aa6.01□□□□□ -1.45
CCDC38-207ENST00000549752 FP248Q71RG6 208 aaPredicted RBP6.01□□□□□ -1.45
CCDC38-207ENST00000549752 Q8NBF4 154 aa6.01□□□□□ -1.45
CCDC38-207ENST00000549752 COPS9Q8WXC6 57 aa6.01□□□□□ -1.45
CCDC38-207ENST00000549752 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
CCDC38-207ENST00000549752 PPDPFQ9H3Y8 114 aa6.01□□□□□ -1.45
CCDC38-207ENST00000549752 COA6Q5JTJ3 125 aaKnown RBP6□□□□□ -1.45
CCDC38-207ENST00000549752 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
CCDC38-207ENST00000549752 SSBP3-AS1Q7Z2R9 100 aa6□□□□□ -1.45
CCDC38-207ENST00000549752 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
CCDC38-207ENST00000549752 LINC00518Q8N0U6 118 aa6□□□□□ -1.45
CCDC38-207ENST00000549752 C3orf79P0CE67 100 aa5.99□□□□□ -1.45
CCDC38-207ENST00000549752 KRTDAPP60985 99 aa5.99□□□□□ -1.45
CCDC38-207ENST00000549752 SOSTDC1Q6X4U4 206 aa5.99□□□□□ -1.45
CCDC38-207ENST00000549752 OR13C6PQ8NH95 151 aa5.99□□□□□ -1.45
CCDC38-207ENST00000549752 LINC00308Q8TCZ7 52 aa5.99□□□□□ -1.45
CCDC38-207ENST00000549752 Q9BRP9 147 aa5.99□□□□□ -1.45
CCDC38-207ENST00000549752 IGLV9-49A0A0B4J1Y8 123 aa5.98□□□□□ -1.45
CCDC38-207ENST00000549752 RPS29P62273 56 aaKnown RBP5.98□□□□□ -1.45
CCDC38-207ENST00000549752 SLC25A34Q6PIV7 304 aa5.98□□□□□ -1.45
CCDC38-207ENST00000549752 ERC2-IT1O76042 136 aa5.97□□□□□ -1.45
CCDC38-207ENST00000549752 MOBPQ13875 183 aa5.97□□□□□ -1.45
CCDC38-207ENST00000549752 SCGB1D4Q6XE38 83 aa5.97□□□□□ -1.45
CCDC38-207ENST00000549752 LITAFQ99732 161 aa5.97□□□□□ -1.45
CCDC38-207ENST00000549752 SPANXDQ9BXN6 97 aa5.97□□□□□ -1.45
CCDC38-207ENST00000549752 DHRS4-AS1Q9P1J3 65 aa5.97□□□□□ -1.45
CCDC38-207ENST00000549752 Q6ZVH6 145 aa5.96□□□□□ -1.46
CCDC38-207ENST00000549752 IFITM1P13164 125 aa5.95□□□□□ -1.46
CCDC38-207ENST00000549752 C9orf153Q5TBE3 101 aa5.95□□□□□ -1.46
CCDC38-207ENST00000549752 SLC25A20O43772 301 aa5.94□□□□□ -1.46
CCDC38-207ENST00000549752 A4D1N5 150 aa5.93□□□□□ -1.46
CCDC38-207ENST00000549752 TRBV7-6A0A0J9YX20 115 aa5.92□□□□□ -1.46
CCDC38-207ENST00000549752 COX7BP24311 80 aa5.92□□□□□ -1.46
CCDC38-207ENST00000549752 KRTAP4-12Q9BQ66 201 aa5.92□□□□□ -1.46
CCDC38-207ENST00000549752 ELOF1P60002 83 aaKnown RBP5.91□□□□□ -1.46
CCDC38-207ENST00000549752 C6orf99Q4VX62 202 aa5.91□□□□□ -1.46
CCDC38-207ENST00000549752 TTTY13Q9BZ97 58 aa5.91□□□□□ -1.46
CCDC38-207ENST00000549752 LAMTOR3Q9UHA4 124 aa5.91□□□□□ -1.46
CCDC38-207ENST00000549752 SPRR1BP22528 89 aa5.9□□□□□ -1.46
CCDC38-207ENST00000549752 S100A2P29034 98 aa5.9□□□□□ -1.46
CCDC38-207ENST00000549752 Q75L30 129 aa5.9□□□□□ -1.46
CCDC38-207ENST00000549752 Q8N377 158 aa5.9□□□□□ -1.46
CCDC38-207ENST00000549752 ST20-AS1Q8NBB2 130 aa5.9□□□□□ -1.46
CCDC38-207ENST00000549752 LIMD2Q9BT23 127 aa5.9□□□□□ -1.46
CCDC38-207ENST00000549752 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
CCDC38-207ENST00000549752 MUC2Q02817 5179 aa5.9□□□□□ -1.47
CCDC38-207ENST00000549752 TRAV13-2A0A0B4J235 113 aa5.89□□□□□ -1.47
CCDC38-207ENST00000549752 A0A1B0GWB2 263 aa5.89□□□□□ -1.47
CCDC38-207ENST00000549752 A6NDN8 102 aa5.89□□□□□ -1.47
CCDC38-207ENST00000549752 HSBP1L1C9JCN9 74 aa5.89□□□□□ -1.47
CCDC38-207ENST00000549752 S100A1P23297 94 aa5.89□□□□□ -1.47
CCDC38-207ENST00000549752 TAL2Q16559 108 aa5.89□□□□□ -1.47
CCDC38-207ENST00000549752 ATOH7Q8N100 152 aa5.89□□□□□ -1.47
CCDC38-207ENST00000549752 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
CCDC38-207ENST00000549752 KRTAP13-3Q3SY46 172 aa5.88□□□□□ -1.47
CCDC38-207ENST00000549752 NHP2Q9NX24 153 aaKnown RBP5.88□□□□□ -1.47
CCDC38-207ENST00000549752 TEX49A0A1B0GTD5 131 aa5.87□□□□□ -1.47
CCDC38-207ENST00000549752 S100A6P06703 90 aa5.87□□□□□ -1.47
CCDC38-207ENST00000549752 MUSTN1Q8IVN3 82 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms