RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 A0A096LNJ9 63 aa4.01□□□□□ -1.77
TMEM116-208ENST00000549537 SMIM26A0A096LP01 95 aa4.01□□□□□ -1.77
TMEM116-208ENST00000549537 LINC01549A6NIU2 74 aa4.01□□□□□ -1.77
TMEM116-208ENST00000549537 RPL37AP8A6NKH3 93 aa4.01□□□□□ -1.77
TMEM116-208ENST00000549537 F8VRH5 84 aa4.01□□□□□ -1.77
TMEM116-208ENST00000549537 KRTAP1-4P0C5Y4 121 aa4.01□□□□□ -1.77
TMEM116-208ENST00000549537 TOMM7Q9P0U1 55 aa4.01□□□□□ -1.77
TMEM116-208ENST00000549537 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
TMEM116-208ENST00000549537 J3KT08 172 aa4□□□□□ -1.77
TMEM116-208ENST00000549537 J3QR89 54 aa4□□□□□ -1.77
TMEM116-208ENST00000549537 DIRC1Q969H9 104 aa4□□□□□ -1.77
TMEM116-208ENST00000549537 XAGE1AQ9HD64 81 aa4□□□□□ -1.77
TMEM116-208ENST00000549537 RPS10P5Q9NQ39 176 aa4□□□□□ -1.77
TMEM116-208ENST00000549537 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 IGLC3P0DOY3 106 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 CXCL5P42830 114 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 HSD52Q0P140 79 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 GTF2H5Q6ZYL4 71 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 C18orf32Q8TCD1 76 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 COX7B2Q8TF08 81 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 TP73-AS1Q9UF72 201 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 C22orf24Q9Y442 160 aa3.99□□□□□ -1.77
TMEM116-208ENST00000549537 SPINK8P0C7L1 97 aa3.98□□□□□ -1.77
TMEM116-208ENST00000549537 UBE2BP63146 152 aa3.98□□□□□ -1.77
TMEM116-208ENST00000549537 COA6Q5JTJ3 125 aaKnown RBP3.98□□□□□ -1.77
TMEM116-208ENST00000549537 YPEL4Q96NS1 127 aa3.98□□□□□ -1.77
TMEM116-208ENST00000549537 OCR1Q9BZK8 76 aa3.98□□□□□ -1.77
TMEM116-208ENST00000549537 RBM12B-AS1Q9P1G2 102 aa3.98□□□□□ -1.77
TMEM116-208ENST00000549537 NUPR1O60356 82 aa3.97□□□□□ -1.77
TMEM116-208ENST00000549537 ZNF22P17026 224 aaPredicted RBP3.97□□□□□ -1.77
TMEM116-208ENST00000549537 PSMB2P49721 201 aa3.97□□□□□ -1.77
TMEM116-208ENST00000549537 C6orf99Q4VX62 202 aa3.97□□□□□ -1.77
TMEM116-208ENST00000549537 NOTCH2NLQ7Z3S9 236 aa3.97□□□□□ -1.77
TMEM116-208ENST00000549537 HIST1H2BLQ99880 126 aa3.97□□□□□ -1.77
TMEM116-208ENST00000549537 ANAPC13Q9BS18 74 aa3.97□□□□□ -1.77
TMEM116-208ENST00000549537 TRAPPC1Q9Y5R8 145 aa3.97□□□□□ -1.77
TMEM116-208ENST00000549537 IGLV1-50A0A075B6I6 118 aa3.96□□□□□ -1.78
TMEM116-208ENST00000549537 ZNF861PO60384 105 aa3.96□□□□□ -1.78
TMEM116-208ENST00000549537 HBDP02042 147 aa3.96□□□□□ -1.78
TMEM116-208ENST00000549537 IGKV2-30P06310 120 aa3.96□□□□□ -1.78
TMEM116-208ENST00000549537 PMCHL1Q16048 86 aa3.96□□□□□ -1.78
TMEM116-208ENST00000549537 LINC00337Q8N6G1 96 aa3.96□□□□□ -1.78
TMEM116-208ENST00000549537 NKAPP1Q8N9T2 125 aa3.96□□□□□ -1.78
TMEM116-208ENST00000549537 LINC00167Q96N53 147 aa3.96□□□□□ -1.78
TMEM116-208ENST00000549537 C11orf86A6NJI1 115 aa3.95□□□□□ -1.78
TMEM116-208ENST00000549537 H3BRM9 83 aa3.95□□□□□ -1.78
TMEM116-208ENST00000549537 BCE1O60756 84 aa3.95□□□□□ -1.78
TMEM116-208ENST00000549537 FABP4P15090 132 aa3.95□□□□□ -1.78
TMEM116-208ENST00000549537 NDUFA6P56556 154 aa3.95□□□□□ -1.78
TMEM116-208ENST00000549537 SCGB1D4Q6XE38 83 aa3.95□□□□□ -1.78
TMEM116-208ENST00000549537 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
TMEM116-208ENST00000549537 PSPHP1O15172 72 aa3.94□□□□□ -1.78
TMEM116-208ENST00000549537 LINC01547P58512 204 aaPredicted RBP3.94□□□□□ -1.78
TMEM116-208ENST00000549537 Q8NDZ9 215 aa3.94□□□□□ -1.78
TMEM116-208ENST00000549537 ZNF625Q96I27 306 aaPredicted RBP3.94□□□□□ -1.78
TMEM116-208ENST00000549537 BAGE3Q86Y29 109 aa3.93□□□□□ -1.78
TMEM116-208ENST00000549537 SND1-IT1Q9HBX3 110 aa3.93□□□□□ -1.78
TMEM116-208ENST00000549537 DHRS4-AS1Q9P1J3 65 aa3.93□□□□□ -1.78
TMEM116-208ENST00000549537 UQCR10Q9UDW1 63 aa3.93□□□□□ -1.78
TMEM116-208ENST00000549537 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
TMEM116-208ENST00000549537 A0A087X002 238 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 TRAV12-1A0A0B4J245 112 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 C9JAW5 83 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST1H2BKO60814 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST1H2BJP06899 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST1H2BOP23527 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST1H2BBP33778 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 RPL28P46779 137 aaKnown RBP3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST1H2BDP58876 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST1H2BCP62807 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 COX17Q14061 63 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 BATFQ16520 125 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST2H2BEQ16778 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.92□□□□□ -1.78
TMEM116-208ENST00000549537 ADAMTSL4-AS1Q5T5F5 129 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST1H2BHQ93079 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 CHCHD1Q96BP2 118 aaKnown RBP3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST1H2BNQ99877 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 HIST1H2BMQ99879 126 aa3.92□□□□□ -1.78
TMEM116-208ENST00000549537 TMEM223A0PJW6 202 aa3.91□□□□□ -1.78
TMEM116-208ENST00000549537 TMEM170BQ5T4T1 132 aa3.91□□□□□ -1.78
TMEM116-208ENST00000549537 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
TMEM116-208ENST00000549537 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
TMEM116-208ENST00000549537 SPANXDQ9BXN6 97 aa3.91□□□□□ -1.78
TMEM116-208ENST00000549537 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
TMEM116-208ENST00000549537 IGKV2-28A0A075B6P5 120 aa3.9□□□□□ -1.79
TMEM116-208ENST00000549537 IGHV6-1A0A0B4J1U7 121 aa3.9□□□□□ -1.79
TMEM116-208ENST00000549537 IGKV2D-28P01615 120 aa3.9□□□□□ -1.79
TMEM116-208ENST00000549537 PRR4Q16378 134 aa3.9□□□□□ -1.79
TMEM116-208ENST00000549537 KRTAP13-2Q52LG2 175 aa3.9□□□□□ -1.79
TMEM116-208ENST00000549537 Q6Q795 121 aa3.9□□□□□ -1.79
TMEM116-208ENST00000549537 SFTA2Q6UW10 78 aa3.9□□□□□ -1.79
TMEM116-208ENST00000549537 PLEKHB2Q96CS7 222 aa3.9□□□□□ -1.79
TMEM116-208ENST00000549537 VAMP8Q9BV40 100 aa3.9□□□□□ -1.79
TMEM116-208ENST00000549537 M0R378 163 aa3.89□□□□□ -1.79
TMEM116-208ENST00000549537 FAM19A2Q8N3H0 131 aa3.89□□□□□ -1.79
TMEM116-208ENST00000549537 ANAPC11Q9NYG5 84 aa3.89□□□□□ -1.79
TMEM116-208ENST00000549537 TAX1BP3O14907 124 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms