RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 C14orf144Q96I85 54 aa5.82□□□□□ -1.48
RAB5B-205ENST00000549034 VAMP8Q9BV40 100 aa5.82□□□□□ -1.48
RAB5B-205ENST00000549034 KCNQ1DNQ9H478 68 aa5.82□□□□□ -1.48
RAB5B-205ENST00000549034 PRYO14603 147 aa5.81□□□□□ -1.48
RAB5B-205ENST00000549034 PRLHP81277 87 aa5.81□□□□□ -1.48
RAB5B-205ENST00000549034 LINC00518Q8N0U6 118 aa5.81□□□□□ -1.48
RAB5B-205ENST00000549034 LINC01600Q96MT4 127 aa5.81□□□□□ -1.48
RAB5B-205ENST00000549034 PYY3Q5JQD4 70 aa5.8□□□□□ -1.48
RAB5B-205ENST00000549034 ETDCA0A1B0GVM5 59 aa5.79□□□□□ -1.48
RAB5B-205ENST00000549034 IGLV6-57P01721 117 aa5.79□□□□□ -1.48
RAB5B-205ENST00000549034 TRAV23DV6A0A075B6W5 121 aa5.78□□□□□ -1.48
RAB5B-205ENST00000549034 DLEU1O43261 78 aa5.78□□□□□ -1.48
RAB5B-205ENST00000549034 KRTAP13-1Q8IUC0 172 aa5.78□□□□□ -1.48
RAB5B-205ENST00000549034 LINC00337Q8N6G1 96 aa5.78□□□□□ -1.48
RAB5B-205ENST00000549034 HIST1H4GQ99525 98 aa5.78□□□□□ -1.48
RAB5B-205ENST00000549034 CBY1Q9Y3M2 126 aa5.78□□□□□ -1.48
RAB5B-205ENST00000549034 A6NDN8 102 aa5.77□□□□□ -1.49
RAB5B-205ENST00000549034 SPRR1AP35321 89 aa5.77□□□□□ -1.49
RAB5B-205ENST00000549034 HINT1P49773 126 aaPredicted RBP5.77□□□□□ -1.49
RAB5B-205ENST00000549034 SLC25A34Q6PIV7 304 aa5.77□□□□□ -1.49
RAB5B-205ENST00000549034 HIGD2AQ9BW72 106 aa5.77□□□□□ -1.49
RAB5B-205ENST00000549034 PPDPFQ9H3Y8 114 aa5.77□□□□□ -1.49
RAB5B-205ENST00000549034 PKHD1L1Q86WI1 4243 aa5.77□□□□□ -1.49
RAB5B-205ENST00000549034 B5MCH6 92 aa5.76□□□□□ -1.49
RAB5B-205ENST00000549034 KRTAP10-8P60410 259 aa5.76□□□□□ -1.49
RAB5B-205ENST00000549034 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
RAB5B-205ENST00000549034 SMCR5Q8TEV8 140 aa5.76□□□□□ -1.49
RAB5B-205ENST00000549034 A4D1N5 150 aa5.75□□□□□ -1.49
RAB5B-205ENST00000549034 KRTAP4-16G5E9R7 235 aaPredicted RBP5.75□□□□□ -1.49
RAB5B-205ENST00000549034 ZNF73O43830 326 aaPredicted RBP5.75□□□□□ -1.49
RAB5B-205ENST00000549034 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
RAB5B-205ENST00000549034 MT1HL1P0DM35 61 aa5.75□□□□□ -1.49
RAB5B-205ENST00000549034 ANAPC11Q9NYG5 84 aa5.75□□□□□ -1.49
RAB5B-205ENST00000549034 TRAV13-2A0A0B4J235 113 aa5.74□□□□□ -1.49
RAB5B-205ENST00000549034 KRTAP9-2Q9BYQ4 174 aa5.74□□□□□ -1.49
RAB5B-205ENST00000549034 HIGD1BQ9P298 99 aa5.73□□□□□ -1.49
RAB5B-205ENST00000549034 CRYGAP11844 174 aa5.72□□□□□ -1.49
RAB5B-205ENST00000549034 C6orf99Q4VX62 202 aa5.72□□□□□ -1.49
RAB5B-205ENST00000549034 C2orf91Q6ZV80 131 aa5.72□□□□□ -1.49
RAB5B-205ENST00000549034 KRTAP4-12Q9BQ66 201 aa5.72□□□□□ -1.49
RAB5B-205ENST00000549034 LRP1Q07954 4544 aaKnown RBP5.72□□□□□ -1.49
RAB5B-205ENST00000549034 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
RAB5B-205ENST00000549034 ERC2-IT1O76042 136 aa5.71□□□□□ -1.5
RAB5B-205ENST00000549034 COX7BP24311 80 aa5.71□□□□□ -1.5
RAB5B-205ENST00000549034 Q6ZRX8 168 aa5.71□□□□□ -1.5
RAB5B-205ENST00000549034 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
RAB5B-205ENST00000549034 C12orf57Q99622 126 aa5.71□□□□□ -1.5
RAB5B-205ENST00000549034 Q9BRP9 147 aa5.71□□□□□ -1.5
RAB5B-205ENST00000549034 ZNF706Q9Y5V0 76 aaPredicted RBP5.71□□□□□ -1.5
RAB5B-205ENST00000549034 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
RAB5B-205ENST00000549034 RPL13AP40429 203 aaKnown RBP5.7□□□□□ -1.5
RAB5B-205ENST00000549034 TAL2Q16559 108 aa5.7□□□□□ -1.5
RAB5B-205ENST00000549034 SMIM11BQ8TCY0 68 aa5.7□□□□□ -1.5
RAB5B-205ENST00000549034 SPRR4Q96PI1 79 aa5.7□□□□□ -1.5
RAB5B-205ENST00000549034 FAT3Q8TDW7 4589 aa5.69□□□□□ -1.5
RAB5B-205ENST00000549034 A0A087X002 238 aa5.69□□□□□ -1.5
RAB5B-205ENST00000549034 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
RAB5B-205ENST00000549034 CEND1Q8N111 149 aa5.69□□□□□ -1.5
RAB5B-205ENST00000549034 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
RAB5B-205ENST00000549034 UQCR10Q9UDW1 63 aa5.69□□□□□ -1.5
RAB5B-205ENST00000549034 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
RAB5B-205ENST00000549034 CFC1BP0CG36 223 aa5.68□□□□□ -1.5
RAB5B-205ENST00000549034 CFC1P0CG37 223 aa5.68□□□□□ -1.5
RAB5B-205ENST00000549034 VAMP3Q15836 100 aa5.68□□□□□ -1.5
RAB5B-205ENST00000549034 FAM229BQ4G0N7 80 aa5.68□□□□□ -1.5
RAB5B-205ENST00000549034 RAB37Q96AX2 223 aa5.68□□□□□ -1.5
RAB5B-205ENST00000549034 DHRS4-AS1Q9P1J3 65 aa5.68□□□□□ -1.5
RAB5B-205ENST00000549034 DMBT1Q9UGM3 2413 aaPredicted RBP5.67□□□□□ -1.5
RAB5B-205ENST00000549034 TRBV7-6A0A0J9YX20 115 aa5.67□□□□□ -1.5
RAB5B-205ENST00000549034 LOC105371267A0A1B0GV96 52 aa5.67□□□□□ -1.5
RAB5B-205ENST00000549034 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
RAB5B-205ENST00000549034 H7C2G1 150 aa5.67□□□□□ -1.5
RAB5B-205ENST00000549034 ELOF1P60002 83 aaKnown RBP5.67□□□□□ -1.5
RAB5B-205ENST00000549034 PRO1933Q9H354 126 aa5.67□□□□□ -1.5
RAB5B-205ENST00000549034 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
RAB5B-205ENST00000549034 ST20-AS1Q8NBB2 130 aa5.66□□□□□ -1.5
RAB5B-205ENST00000549034 HSD52Q0P140 79 aa5.65□□□□□ -1.5
RAB5B-205ENST00000549034 C3orf22Q8N5N4 141 aa5.65□□□□□ -1.5
RAB5B-205ENST00000549034 DEFB105AQ8NG35 78 aa5.65□□□□□ -1.5
RAB5B-205ENST00000549034 A0A0B4J2C4 111 aa5.64□□□□□ -1.51
RAB5B-205ENST00000549034 SLC25A20O43772 301 aa5.64□□□□□ -1.51
RAB5B-205ENST00000549034 SMIM6P0DI80 62 aa5.64□□□□□ -1.51
RAB5B-205ENST00000549034 FXYD2P54710 66 aa5.64□□□□□ -1.51
RAB5B-205ENST00000549034 LINC00483Q53H64 154 aa5.64□□□□□ -1.51
RAB5B-205ENST00000549034 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
RAB5B-205ENST00000549034 TSPAN13O95857 204 aa5.63□□□□□ -1.51
RAB5B-205ENST00000549034 NHP2Q9NX24 153 aaKnown RBP5.63□□□□□ -1.51
RAB5B-205ENST00000549034 PRO1854Q9UHT4 67 aa5.63□□□□□ -1.51
RAB5B-205ENST00000549034 Q1RN00 199 aa5.62□□□□□ -1.51
RAB5B-205ENST00000549034 BVES-AS1Q5T3Y7 98 aa5.62□□□□□ -1.51
RAB5B-205ENST00000549034 LINC00575Q6W349 94 aa5.62□□□□□ -1.51
RAB5B-205ENST00000549034 hADV29S1A0JD25 119 aa5.61□□□□□ -1.51
RAB5B-205ENST00000549034 CDIP1Q9H305 208 aa5.61□□□□□ -1.51
RAB5B-205ENST00000549034 TEX49A0A1B0GTD5 131 aa5.6□□□□□ -1.51
RAB5B-205ENST00000549034 CTAG1AP78358 180 aa5.6□□□□□ -1.51
RAB5B-205ENST00000549034 MOBPQ13875 183 aa5.6□□□□□ -1.51
RAB5B-205ENST00000549034 C9orf153Q5TBE3 101 aa5.6□□□□□ -1.51
RAB5B-205ENST00000549034 SSBP3-AS1Q7Z2R9 100 aa5.6□□□□□ -1.51
RAB5B-205ENST00000549034 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
RAB5B-205ENST00000549034 LAMTOR3Q9UHA4 124 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms