RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 HSPB8Q9UJY1 196 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 KRTAP10-12P60413 245 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 C9orf116Q5BN46 136 aaPredicted RBP2.3□□□□□ -2.04
APAF1-208ENST00000549007 UNQ6190/PRO20217Q6UXQ8 127 aa2.3□□□□□ -2.04
APAF1-208ENST00000549007 IGHV1-58A0A0C4DH39 117 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 TINCRA0A1B0GVN0 87 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 SYS1-DBNDD2H3BUS1 97 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 HERVK_113P63121 156 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 Q6ZRU5 148 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 ANAPC13Q9BS18 74 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 CBY1Q9Y3M2 126 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
APAF1-208ENST00000549007 GVQW2A0A096LPI5 108 aaPredicted RBP2.29□□□□□ -2.04
APAF1-208ENST00000549007 IGKV2-24A0A0C4DH68 120 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 F8VRH5 84 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
APAF1-208ENST00000549007 IGLV1-50A0A075B6I6 118 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 BATFQ16520 125 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 RYR1P21817 5038 aa2.29□□□□□ -2.04
APAF1-208ENST00000549007 TRAV12-1A0A0B4J245 112 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 LINC01549A6NIU2 74 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 APOMO95445 188 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 TSPEAR-AS2P59090 65 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 FAM19A3Q7Z5A8 133 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 CARD19Q96LW7 228 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 TTTY13Q9BZ97 58 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 DNAH8Q96JB1 4490 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 C8orf87E5RJ46 101 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 DPM2O94777 84 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 IGKCP01834 107 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 KRTAP1-4P0C5Y4 121 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 SEC11AP67812 179 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 COX7B2Q8TF08 81 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 C6orf48Q9UBA6 75 aa2.28□□□□□ -2.04
APAF1-208ENST00000549007 H3BRM9 83 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 LINC00483Q53H64 154 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 LINC01545Q5VT33 79 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 TP73-AS1Q9UF72 201 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 FAT1Q14517 4588 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 A0A096LNI7 61 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 NDUFA1O15239 70 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 HINT1P49773 126 aaPredicted RBP2.27□□□□□ -2.05
APAF1-208ENST00000549007 CKS1BP61024 79 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 IGKV2D-26A0A0A0MRZ7 120 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.27□□□□□ -2.05
APAF1-208ENST00000549007 SMR3BP02814 79 aaPredicted RBP2.27□□□□□ -2.05
APAF1-208ENST00000549007 CNBPP62633 177 aaKnown RBP2.27□□□□□ -2.05
APAF1-208ENST00000549007 SLC25A34Q6PIV7 304 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 C9orf163Q8N9P6 203 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 DPH3Q96FX2 82 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 KRTAP17-1Q9BYP8 105 aa2.27□□□□□ -2.05
APAF1-208ENST00000549007 HSPG2P98160 4391 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 PLNP26678 52 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 BVES-AS1Q5T3Y7 98 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 SDIM1Q6ZPB5 146 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 Q8IZM0 81 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 XAGE1AQ9HD64 81 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 BPY2O14599 106 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 TAX1BP3O14907 124 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 COX8AP10176 69 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 DAND5Q8N907 189 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 SCXQ7RTU7 201 aa2.26□□□□□ -2.05
APAF1-208ENST00000549007 J3QQQ9 107 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 NPC2P61916 151 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 FAM19A5Q7Z5A7 132 aaPredicted RBP2.25□□□□□ -2.05
APAF1-208ENST00000549007 NDUFA12Q9UI09 145 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 HERC2O95714 4834 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 SMIM13P0DJ93 91 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 LGALS3P17931 250 aaKnown RBP2.25□□□□□ -2.05
APAF1-208ENST00000549007 C2orf91Q6ZV80 131 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 PLEKHB2Q96CS7 222 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 LOC107984640A0A0U1RRK4 108 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 A0A1W2PNN7 141 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 LEPROTO15243 131 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 LINC00158P58513 81 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 MEIG1Q5JSS6 88 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 ADM2Q7Z4H4 148 aa2.25□□□□□ -2.05
APAF1-208ENST00000549007 SPACA4Q8TDM5 124 aa2.24□□□□□ -2.05
APAF1-208ENST00000549007 ERG28Q9UKR5 140 aa2.24□□□□□ -2.05
APAF1-208ENST00000549007 ABCA13Q86UQ4 5058 aa2.24□□□□□ -2.05
APAF1-208ENST00000549007 TRBV30A0A0K0K1B3 111 aa2.24□□□□□ -2.05
APAF1-208ENST00000549007 ZNF815PA8K554 130 aa2.24□□□□□ -2.05
APAF1-208ENST00000549007 Q8NDZ9 215 aa2.24□□□□□ -2.05
APAF1-208ENST00000549007 HSD52Q0P140 79 aa2.23□□□□□ -2.05
APAF1-208ENST00000549007 Q6ZSA8 131 aa2.23□□□□□ -2.05
APAF1-208ENST00000549007 PHF5AQ7RTV0 110 aaKnown RBP2.23□□□□□ -2.05
APAF1-208ENST00000549007 MYMXA0A1B0GTQ4 84 aa2.23□□□□□ -2.05
APAF1-208ENST00000549007 OCIAD2Q56VL3 154 aa2.23□□□□□ -2.05
APAF1-208ENST00000549007 MIR7-3HGQ8N6C7 128 aa2.23□□□□□ -2.05
APAF1-208ENST00000549007 HIGD1BQ9P298 99 aa2.23□□□□□ -2.05
APAF1-208ENST00000549007 FLG2Q5D862 2391 aaPredicted RBP2.22□□□□□ -2.05
APAF1-208ENST00000549007 SCGB1C2P0DMR2 95 aa2.22□□□□□ -2.05
APAF1-208ENST00000549007 GTF2H5Q6ZYL4 71 aa2.22□□□□□ -2.05
APAF1-208ENST00000549007 K7EP34 96 aa2.22□□□□□ -2.05
APAF1-208ENST00000549007 NCR3O14931 201 aa2.22□□□□□ -2.05
APAF1-208ENST00000549007 SOSTDC1Q6X4U4 206 aa2.22□□□□□ -2.05
APAF1-208ENST00000549007 SCGB1D4Q6XE38 83 aa2.22□□□□□ -2.05
APAF1-208ENST00000549007 K7ERU9 68 aa2.22□□□□□ -2.05
APAF1-208ENST00000549007 CIRBPQ14011 172 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms