RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 H0Y9J4 135 aa12.61□□□□□ -0.39
GPN3-205ENST00000547323 LRP1Q07954 4544 aaKnown RBP12.6□□□□□ -0.39
GPN3-205ENST00000547323 A4D1N5 150 aa12.6□□□□□ -0.39
GPN3-205ENST00000547323 TRAV23DV6A0A075B6W5 121 aa12.59□□□□□ -0.39
GPN3-205ENST00000547323 A6NDN8 102 aa12.57□□□□□ -0.4
GPN3-205ENST00000547323 ETDCA0A1B0GVM5 59 aa12.56□□□□□ -0.4
GPN3-205ENST00000547323 SMIM6P0DI80 62 aa12.56□□□□□ -0.4
GPN3-205ENST00000547323 KRTAP29-1A8MX34 341 aaPredicted RBP12.55□□□□□ -0.4
GPN3-205ENST00000547323 B5MCH6 92 aa12.55□□□□□ -0.4
GPN3-205ENST00000547323 ZNF73O43830 326 aaPredicted RBP12.55□□□□□ -0.4
GPN3-205ENST00000547323 C12orf57Q99622 126 aa12.55□□□□□ -0.4
GPN3-205ENST00000547323 PRO1933Q9H354 126 aa12.55□□□□□ -0.4
GPN3-205ENST00000547323 FAT3Q8TDW7 4589 aa12.55□□□□□ -0.4
GPN3-205ENST00000547323 OXTP01178 125 aa12.54□□□□□ -0.4
GPN3-205ENST00000547323 UQCR10Q9UDW1 63 aa12.54□□□□□ -0.4
GPN3-205ENST00000547323 HIGD2AQ9BW72 106 aa12.53□□□□□ -0.4
GPN3-205ENST00000547323 KRTAP1-4P0C5Y4 121 aa12.52□□□□□ -0.41
GPN3-205ENST00000547323 TRAV13-2A0A0B4J235 113 aa12.51□□□□□ -0.41
GPN3-205ENST00000547323 TAL2Q16559 108 aa12.51□□□□□ -0.41
GPN3-205ENST00000547323 CEND1Q8N111 149 aa12.51□□□□□ -0.41
GPN3-205ENST00000547323 LINC01600Q96MT4 127 aa12.51□□□□□ -0.41
GPN3-205ENST00000547323 CBY1Q9Y3M2 126 aa12.5□□□□□ -0.41
GPN3-205ENST00000547323 Q6ZRX8 168 aa12.49□□□□□ -0.41
GPN3-205ENST00000547323 SMCR5Q8TEV8 140 aa12.49□□□□□ -0.41
GPN3-205ENST00000547323 Q9BRP9 147 aa12.49□□□□□ -0.41
GPN3-205ENST00000547323 J3QL48 77 aa12.48□□□□□ -0.41
GPN3-205ENST00000547323 MT1HL1P0DM35 61 aa12.48□□□□□ -0.41
GPN3-205ENST00000547323 C6orf99Q4VX62 202 aa12.48□□□□□ -0.41
GPN3-205ENST00000547323 CFC1BP0CG36 223 aa12.47□□□□□ -0.41
GPN3-205ENST00000547323 CFC1P0CG37 223 aa12.47□□□□□ -0.41
GPN3-205ENST00000547323 SMIM11BQ8TCY0 68 aa12.47□□□□□ -0.41
GPN3-205ENST00000547323 ANAPC11Q9NYG5 84 aa12.47□□□□□ -0.41
GPN3-205ENST00000547323 ERC2-IT1O76042 136 aa12.46□□□□□ -0.41
GPN3-205ENST00000547323 FXYD2P54710 66 aa12.46□□□□□ -0.41
GPN3-205ENST00000547323 RPL13AP40429 203 aaKnown RBP12.45□□□□□ -0.42
GPN3-205ENST00000547323 HSD52Q0P140 79 aa12.45□□□□□ -0.42
GPN3-205ENST00000547323 DMBT1Q9UGM3 2413 aaPredicted RBP12.45□□□□□ -0.42
GPN3-205ENST00000547323 HINT1P49773 126 aaPredicted RBP12.44□□□□□ -0.42
GPN3-205ENST00000547323 PRR26Q8N8Z3 221 aa12.44□□□□□ -0.42
GPN3-205ENST00000547323 KRTAP10-8P60410 259 aa12.43□□□□□ -0.42
GPN3-205ENST00000547323 COX7BP24311 80 aa12.42□□□□□ -0.42
GPN3-205ENST00000547323 ELOF1P60002 83 aaKnown RBP12.41□□□□□ -0.42
GPN3-205ENST00000547323 RAB37Q96AX2 223 aa12.4□□□□□ -0.42
GPN3-205ENST00000547323 SPRR4Q96PI1 79 aa12.4□□□□□ -0.42
GPN3-205ENST00000547323 A0A0B4J2C4 111 aa12.39□□□□□ -0.43
GPN3-205ENST00000547323 TRBV7-6A0A0J9YX20 115 aa12.39□□□□□ -0.43
GPN3-205ENST00000547323 H7C2G1 150 aa12.39□□□□□ -0.43
GPN3-205ENST00000547323 A0A087X002 238 aa12.38□□□□□ -0.43
GPN3-205ENST00000547323 TMEM238LA0A1B0GVL6 79 aa12.37□□□□□ -0.43
GPN3-205ENST00000547323 A6NJY4 79 aa12.37□□□□□ -0.43
GPN3-205ENST00000547323 TNXBP22105 4242 aa12.37□□□□□ -0.43
GPN3-205ENST00000547323 HERC1Q15751 4861 aa12.37□□□□□ -0.43
GPN3-205ENST00000547323 A0A1B0GWB2 263 aa12.36□□□□□ -0.43
GPN3-205ENST00000547323 ST20-AS1Q8NBB2 130 aa12.35□□□□□ -0.43
GPN3-205ENST00000547323 NHP2Q9NX24 153 aaKnown RBP12.35□□□□□ -0.43
GPN3-205ENST00000547323 DHRS4-AS1Q9P1J3 65 aa12.35□□□□□ -0.43
GPN3-205ENST00000547323 CTAG1AP78358 180 aa12.34□□□□□ -0.43
GPN3-205ENST00000547323 BVES-AS1Q5T3Y7 98 aa12.34□□□□□ -0.43
GPN3-205ENST00000547323 PRO1854Q9UHT4 67 aa12.34□□□□□ -0.43
GPN3-205ENST00000547323 ZNF706Q9Y5V0 76 aaPredicted RBP12.34□□□□□ -0.43
GPN3-205ENST00000547323 K7ERJ3 54 aa12.33□□□□□ -0.44
GPN3-205ENST00000547323 CRYGAP11844 174 aa12.33□□□□□ -0.44
GPN3-205ENST00000547323 FAM229BQ4G0N7 80 aa12.33□□□□□ -0.44
GPN3-205ENST00000547323 KRTAP13-2Q52LG2 175 aa12.33□□□□□ -0.44
GPN3-205ENST00000547323 GAGE2AQ6NT46 116 aa12.33□□□□□ -0.44
GPN3-205ENST00000547323 TSTD3H0UI37 97 aa12.32□□□□□ -0.44
GPN3-205ENST00000547323 VAMP3Q15836 100 aa12.31□□□□□ -0.44
GPN3-205ENST00000547323 LINC00483Q53H64 154 aa12.29□□□□□ -0.44
GPN3-205ENST00000547323 Q1RN00 199 aa12.28□□□□□ -0.44
GPN3-205ENST00000547323 C3orf22Q8N5N4 141 aa12.28□□□□□ -0.44
GPN3-205ENST00000547323 LINC00575Q6W349 94 aa12.27□□□□□ -0.45
GPN3-205ENST00000547323 TYMSOSQ8TAI1 123 aa12.26□□□□□ -0.45
GPN3-205ENST00000547323 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
GPN3-205ENST00000547323 SLC25A20O43772 301 aa12.22□□□□□ -0.45
GPN3-205ENST00000547323 M0R143 59 aa12.21□□□□□ -0.45
GPN3-205ENST00000547323 hADV29S1A0JD25 119 aa12.2□□□□□ -0.46
GPN3-205ENST00000547323 TRIAP1O43715 76 aa12.2□□□□□ -0.46
GPN3-205ENST00000547323 TSPAN13O95857 204 aa12.2□□□□□ -0.46
GPN3-205ENST00000547323 SPRR1BP22528 89 aa12.2□□□□□ -0.46
GPN3-205ENST00000547323 LINC01547P58512 204 aaPredicted RBP12.2□□□□□ -0.46
GPN3-205ENST00000547323 FAM218AQ96MZ4 157 aa12.19□□□□□ -0.46
GPN3-205ENST00000547323 IGLV9-49A0A0B4J1Y8 123 aa12.18□□□□□ -0.46
GPN3-205ENST00000547323 H0YGX0 51 aa12.18□□□□□ -0.46
GPN3-205ENST00000547323 IGLV5-48A0A075B6I7 105 aa12.16□□□□□ -0.46
GPN3-205ENST00000547323 TEX49A0A1B0GTD5 131 aa12.16□□□□□ -0.46
GPN3-205ENST00000547323 PSMB2P49721 201 aa12.16□□□□□ -0.46
GPN3-205ENST00000547323 Q6ZQY7 126 aa12.16□□□□□ -0.46
GPN3-205ENST00000547323 MOBPQ13875 183 aa12.15□□□□□ -0.46
GPN3-205ENST00000547323 Q8N377 158 aa12.15□□□□□ -0.46
GPN3-205ENST00000547323 BATFQ16520 125 aa12.14□□□□□ -0.47
GPN3-205ENST00000547323 SMIM29Q86T20 159 aa12.13□□□□□ -0.47
GPN3-205ENST00000547323 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
GPN3-205ENST00000547323 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
GPN3-205ENST00000547323 Q8NBF4 154 aa12.12□□□□□ -0.47
GPN3-205ENST00000547323 C9orf153Q5TBE3 101 aa12.11□□□□□ -0.47
GPN3-205ENST00000547323 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.11□□□□□ -0.47
GPN3-205ENST00000547323 LAMTOR3Q9UHA4 124 aa12.11□□□□□ -0.47
GPN3-205ENST00000547323 COX6CP09669 75 aa12.08□□□□□ -0.48
GPN3-205ENST00000547323 SSBP3-AS1Q7Z2R9 100 aa12.08□□□□□ -0.48
GPN3-205ENST00000547323 NAA38Q9BRA0 125 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms