RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PLA2G2AP14555 144 aa8.78□□□□□ -1
PTCH1-212ENST00000546744 LINC00167Q96N53 147 aa8.78□□□□□ -1
PTCH1-212ENST00000546744 FN1P02751 2386 aaKnown RBP8.78□□□□□ -1
PTCH1-212ENST00000546744 C22orf24Q9Y442 160 aa8.77□□□□□ -1
PTCH1-212ENST00000546744 CFAP47Q6ZTR5 3102 aa8.77□□□□□ -1.01
PTCH1-212ENST00000546744 LINC01556Q5JQF7 62 aa8.77□□□□□ -1.01
PTCH1-212ENST00000546744 C7orf65Q6ZTY9 151 aa8.77□□□□□ -1.01
PTCH1-212ENST00000546744 ADGRG4Q8IZF6 3080 aa8.76□□□□□ -1.01
PTCH1-212ENST00000546744 OBSCN-AS1Q96MR7 158 aa8.75□□□□□ -1.01
PTCH1-212ENST00000546744 LCA10Q71F78 164 aa8.75□□□□□ -1.01
PTCH1-212ENST00000546744 SPANXA2-OT1Q8N9U9 137 aa8.75□□□□□ -1.01
PTCH1-212ENST00000546744 HECTD1Q9ULT8 2610 aa8.74□□□□□ -1.01
PTCH1-212ENST00000546744 ASPMQ8IZT6 3477 aa8.74□□□□□ -1.01
PTCH1-212ENST00000546744 DCHS1Q96JQ0 3298 aa8.73□□□□□ -1.01
PTCH1-212ENST00000546744 LINC00476Q8WZB0 136 aa8.73□□□□□ -1.01
PTCH1-212ENST00000546744 LAMA5O15230 3695 aa8.73□□□□□ -1.01
PTCH1-212ENST00000546744 ACANP16112 2415 aa8.72□□□□□ -1.01
PTCH1-212ENST00000546744 DEFB116Q30KQ4 102 aa8.71□□□□□ -1.02
PTCH1-212ENST00000546744 COA5Q86WW8 74 aa8.71□□□□□ -1.02
PTCH1-212ENST00000546744 Q9UF83 564 aa8.71□□□□□ -1.02
PTCH1-212ENST00000546744 FLNCQ14315 2725 aa8.7□□□□□ -1.02
PTCH1-212ENST00000546744 A8MWP4 228 aa8.7□□□□□ -1.02
PTCH1-212ENST00000546744 LINC00528Q8N1L1 170 aa8.7□□□□□ -1.02
PTCH1-212ENST00000546744 NBEAQ8NFP9 2946 aa8.7□□□□□ -1.02
PTCH1-212ENST00000546744 KALRNO60229 2985 aa8.7□□□□□ -1.02
PTCH1-212ENST00000546744 ZZEF1O43149 2961 aa8.69□□□□□ -1.02
PTCH1-212ENST00000546744 UQCR11O14957 56 aa8.69□□□□□ -1.02
PTCH1-212ENST00000546744 Q1T7F1 81 aa8.68□□□□□ -1.02
PTCH1-212ENST00000546744 CFAP46Q8IYW2 2715 aa8.68□□□□□ -1.02
PTCH1-212ENST00000546744 KCNQ1DNQ9H478 68 aa8.67□□□□□ -1.02
PTCH1-212ENST00000546744 Q6ZRP5 223 aa8.67□□□□□ -1.02
PTCH1-212ENST00000546744 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-212ENST00000546744 PRLHP81277 87 aa8.66□□□□□ -1.02
PTCH1-212ENST00000546744 MAP1AP78559 2803 aaPredicted RBP8.65□□□□□ -1.02
PTCH1-212ENST00000546744 ITPR1Q14643 2758 aa8.64□□□□□ -1.03
PTCH1-212ENST00000546744 CIRBP-AS1Q8TBR5 109 aa8.64□□□□□ -1.03
PTCH1-212ENST00000546744 ZFHX4Q86UP3 3567 aa8.64□□□□□ -1.03
PTCH1-212ENST00000546744 K7EQZ3 153 aa8.64□□□□□ -1.03
PTCH1-212ENST00000546744 CDC42SE1Q9NRR8 79 aa8.63□□□□□ -1.03
PTCH1-212ENST00000546744 CHD6Q8TD26 2715 aa8.63□□□□□ -1.03
PTCH1-212ENST00000546744 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
PTCH1-212ENST00000546744 HELZ2Q9BYK8 2649 aaKnown RBP8.62□□□□□ -1.03
PTCH1-212ENST00000546744 FSHBP01225 129 aa8.61□□□□□ -1.03
PTCH1-212ENST00000546744 NUPR2A6NF83 97 aa8.61□□□□□ -1.03
PTCH1-212ENST00000546744 F8P00451 2351 aa8.61□□□□□ -1.03
PTCH1-212ENST00000546744 COL12A1Q99715 3063 aa8.6□□□□□ -1.03
PTCH1-212ENST00000546744 LRBAP50851 2863 aa8.6□□□□□ -1.03
PTCH1-212ENST00000546744 X6R8D5 127 aa8.6□□□□□ -1.03
PTCH1-212ENST00000546744 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
PTCH1-212ENST00000546744 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.04
PTCH1-212ENST00000546744 OCR1Q9BZK8 76 aa8.58□□□□□ -1.04
PTCH1-212ENST00000546744 SPINK1P00995 79 aa8.57□□□□□ -1.04
PTCH1-212ENST00000546744 MAST4O15021 2626 aa8.57□□□□□ -1.04
PTCH1-212ENST00000546744 RPL37AP61513 92 aaKnown RBP8.57□□□□□ -1.04
PTCH1-212ENST00000546744 Q5XG85 94 aa8.57□□□□□ -1.04
PTCH1-212ENST00000546744 PLA2G2DQ9UNK4 145 aa8.57□□□□□ -1.04
PTCH1-212ENST00000546744 PRR34Q9NV39 138 aa8.56□□□□□ -1.04
PTCH1-212ENST00000546744 C16orf90A8MZG2 172 aa8.56□□□□□ -1.04
PTCH1-212ENST00000546744 IGKV2D-30A0A075B6S6 120 aa8.55□□□□□ -1.04
PTCH1-212ENST00000546744 IGKV2-30P06310 120 aa8.55□□□□□ -1.04
PTCH1-212ENST00000546744 IGLV1-50A0A075B6I6 118 aa8.54□□□□□ -1.04
PTCH1-212ENST00000546744 FLNAP21333 2647 aaKnown RBP8.54□□□□□ -1.04
PTCH1-212ENST00000546744 IGLV5-48A0A075B6I7 105 aa8.53□□□□□ -1.04
PTCH1-212ENST00000546744 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
PTCH1-212ENST00000546744 SETXQ7Z333 2677 aaKnown RBP8.53□□□□□ -1.04
PTCH1-212ENST00000546744 Q8N377 158 aa8.52□□□□□ -1.04
PTCH1-212ENST00000546744 ST20-AS1Q8NBB2 130 aa8.52□□□□□ -1.05
PTCH1-212ENST00000546744 ITPR3Q14573 2671 aa8.51□□□□□ -1.05
PTCH1-212ENST00000546744 TLX1NBP0CAT3 122 aa8.51□□□□□ -1.05
PTCH1-212ENST00000546744 A0A096LNT2 108 aa8.51□□□□□ -1.05
PTCH1-212ENST00000546744 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
PTCH1-212ENST00000546744 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
PTCH1-212ENST00000546744 RELNP78509 3460 aa8.5□□□□□ -1.05
PTCH1-212ENST00000546744 EPM2AB3EWF7 344 aa8.5□□□□□ -1.05
PTCH1-212ENST00000546744 LINC00313P59037 77 aa8.5□□□□□ -1.05
PTCH1-212ENST00000546744 LINC00612Q8N6U2 182 aa8.5□□□□□ -1.05
PTCH1-212ENST00000546744 SMR3AQ99954 134 aa8.5□□□□□ -1.05
PTCH1-212ENST00000546744 ATRQ13535 2644 aa8.5□□□□□ -1.05
PTCH1-212ENST00000546744 IGFL1Q6UW32 110 aa8.49□□□□□ -1.05
PTCH1-212ENST00000546744 DNAH10OSP0CZ25 163 aa8.49□□□□□ -1.05
PTCH1-212ENST00000546744 C8orf17Q9NRJ1 99 aa8.49□□□□□ -1.05
PTCH1-212ENST00000546744 HRNRQ86YZ3 2850 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-212ENST00000546744 IGLV5-52A0A0A0MRZ9 124 aa8.48□□□□□ -1.05
PTCH1-212ENST00000546744 Q75L30 129 aa8.48□□□□□ -1.05
PTCH1-212ENST00000546744 Q8NAQ8 132 aa8.47□□□□□ -1.05
PTCH1-212ENST00000546744 ZNF575Q86XF7 245 aa8.46□□□□□ -1.05
PTCH1-212ENST00000546744 CSNK1G2-AS1Q8NCQ2 148 aa8.46□□□□□ -1.05
PTCH1-212ENST00000546744 TACC2O95359 2948 aa8.45□□□□□ -1.06
PTCH1-212ENST00000546744 A0A1B0GVX0 72 aa8.45□□□□□ -1.06
PTCH1-212ENST00000546744 FP248Q71RG6 208 aaPredicted RBP8.45□□□□□ -1.06
PTCH1-212ENST00000546744 MGAM2Q2M2H8 2515 aa8.44□□□□□ -1.06
PTCH1-212ENST00000546744 A0A1W2PNM2 257 aa8.44□□□□□ -1.06
PTCH1-212ENST00000546744 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
PTCH1-212ENST00000546744 UNC79Q9P2D8 2635 aa8.43□□□□□ -1.06
PTCH1-212ENST00000546744 MDFIQ99750 246 aa8.43□□□□□ -1.06
PTCH1-212ENST00000546744 RBM12B-AS1Q9P1G2 102 aa8.43□□□□□ -1.06
PTCH1-212ENST00000546744 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
PTCH1-212ENST00000546744 KRTAP1-3Q8IUG1 177 aa8.42□□□□□ -1.06
PTCH1-212ENST00000546744 M0R2N4 97 aa8.41□□□□□ -1.06
PTCH1-212ENST00000546744 UTP20O75691 2785 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms