RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 TENM2Q9NT68 2774 aa6.69□□□□□ -1.34
TRAF1-203ENST00000546084 MIFP14174 115 aa6.69□□□□□ -1.34
TRAF1-203ENST00000546084 OXTP01178 125 aa6.68□□□□□ -1.34
TRAF1-203ENST00000546084 UPK3BQ9BT76 320 aa6.68□□□□□ -1.34
TRAF1-203ENST00000546084 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.68□□□□□ -1.34
TRAF1-203ENST00000546084 HIGD2AQ9BW72 106 aa6.68□□□□□ -1.34
TRAF1-203ENST00000546084 LELP1Q5T871 98 aa6.67□□□□□ -1.34
TRAF1-203ENST00000546084 M0R2N4 97 aa6.67□□□□□ -1.34
TRAF1-203ENST00000546084 COX7BP24311 80 aa6.67□□□□□ -1.34
TRAF1-203ENST00000546084 LYPD5Q6UWN5 251 aa6.67□□□□□ -1.34
TRAF1-203ENST00000546084 C16orf95Q9H693 158 aa6.67□□□□□ -1.34
TRAF1-203ENST00000546084 Q6ZRU5 148 aa6.67□□□□□ -1.34
TRAF1-203ENST00000546084 RMI2Q96E14 147 aa6.66□□□□□ -1.34
TRAF1-203ENST00000546084 ETDCA0A1B0GVM5 59 aa6.66□□□□□ -1.34
TRAF1-203ENST00000546084 DEFB116Q30KQ4 102 aa6.65□□□□□ -1.34
TRAF1-203ENST00000546084 ZNF73O43830 326 aaPredicted RBP6.64□□□□□ -1.35
TRAF1-203ENST00000546084 SYCNQ0VAF6 134 aa6.64□□□□□ -1.35
TRAF1-203ENST00000546084 ESRGQ1W209 222 aa6.64□□□□□ -1.35
TRAF1-203ENST00000546084 RBM12B-AS1Q9P1G2 102 aa6.64□□□□□ -1.35
TRAF1-203ENST00000546084 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
TRAF1-203ENST00000546084 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
TRAF1-203ENST00000546084 NREPQ16612 68 aa6.63□□□□□ -1.35
TRAF1-203ENST00000546084 C6orf48Q9UBA6 75 aa6.63□□□□□ -1.35
TRAF1-203ENST00000546084 A0A1B0GUV1 79 aa6.63□□□□□ -1.35
TRAF1-203ENST00000546084 PRR4Q16378 134 aa6.63□□□□□ -1.35
TRAF1-203ENST00000546084 Q8NAQ8 132 aa6.63□□□□□ -1.35
TRAF1-203ENST00000546084 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
TRAF1-203ENST00000546084 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
TRAF1-203ENST00000546084 NDUFC1O43677 76 aa6.62□□□□□ -1.35
TRAF1-203ENST00000546084 ATP5EP2Q5VTU8 51 aa6.61□□□□□ -1.35
TRAF1-203ENST00000546084 OBSCN-AS1Q96MR7 158 aa6.61□□□□□ -1.35
TRAF1-203ENST00000546084 A6NED7 52 aa6.6□□□□□ -1.35
TRAF1-203ENST00000546084 Q8NDZ9 215 aa6.6□□□□□ -1.35
TRAF1-203ENST00000546084 KRTAP24-1Q3LI83 254 aa6.6□□□□□ -1.35
TRAF1-203ENST00000546084 LINC00575Q6W349 94 aa6.6□□□□□ -1.35
TRAF1-203ENST00000546084 FAM168BA1KXE4 195 aa6.59□□□□□ -1.35
TRAF1-203ENST00000546084 COX17Q14061 63 aa6.59□□□□□ -1.35
TRAF1-203ENST00000546084 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
TRAF1-203ENST00000546084 KRTAP10-11P60412 298 aa6.58□□□□□ -1.36
TRAF1-203ENST00000546084 NDUFS5O43920 106 aa6.58□□□□□ -1.36
TRAF1-203ENST00000546084 KIAA0087Q14695 138 aa6.58□□□□□ -1.36
TRAF1-203ENST00000546084 LINC01547P58512 204 aaPredicted RBP6.58□□□□□ -1.36
TRAF1-203ENST00000546084 Q6ZVQ6 151 aa6.57□□□□□ -1.36
TRAF1-203ENST00000546084 CASC10Q5T4H9 136 aa6.56□□□□□ -1.36
TRAF1-203ENST00000546084 UBE2AP49459 152 aa6.56□□□□□ -1.36
TRAF1-203ENST00000546084 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
TRAF1-203ENST00000546084 Q6ZQT0 140 aa6.56□□□□□ -1.36
TRAF1-203ENST00000546084 TRAV10A0A0B4J240 114 aa6.55□□□□□ -1.36
TRAF1-203ENST00000546084 PRLHP81277 87 aa6.55□□□□□ -1.36
TRAF1-203ENST00000546084 BPY2O14599 106 aa6.55□□□□□ -1.36
TRAF1-203ENST00000546084 FP248Q71RG6 208 aaPredicted RBP6.55□□□□□ -1.36
TRAF1-203ENST00000546084 Q6ZRP5 223 aa6.54□□□□□ -1.36
TRAF1-203ENST00000546084 ST20-AS1Q8NBB2 130 aa6.54□□□□□ -1.36
TRAF1-203ENST00000546084 M0R378 163 aa6.53□□□□□ -1.36
TRAF1-203ENST00000546084 WFDC13Q8IUB5 93 aa6.53□□□□□ -1.36
TRAF1-203ENST00000546084 MUC7Q8TAX7 377 aa6.53□□□□□ -1.36
TRAF1-203ENST00000546084 LINC00167Q96N53 147 aa6.53□□□□□ -1.36
TRAF1-203ENST00000546084 PRR15Q8IV56 129 aa6.52□□□□□ -1.37
TRAF1-203ENST00000546084 FAM30AQ9NZY2 134 aa6.52□□□□□ -1.37
TRAF1-203ENST00000546084 PDE6GP18545 87 aa6.52□□□□□ -1.37
TRAF1-203ENST00000546084 H7BZZ5 65 aa6.51□□□□□ -1.37
TRAF1-203ENST00000546084 CHTF8P0CG12 524 aa6.51□□□□□ -1.37
TRAF1-203ENST00000546084 C7orf33Q8WU49 177 aa6.51□□□□□ -1.37
TRAF1-203ENST00000546084 EGFEM1PQ0D2K5 195 aa6.5□□□□□ -1.37
TRAF1-203ENST00000546084 TM2D3Q9BRN9 247 aa6.5□□□□□ -1.37
TRAF1-203ENST00000546084 LOC110117498A0A087WWA1 95 aa6.48□□□□□ -1.37
TRAF1-203ENST00000546084 IGLV6-57P01721 117 aa6.48□□□□□ -1.37
TRAF1-203ENST00000546084 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
TRAF1-203ENST00000546084 ZNF706Q9Y5V0 76 aaPredicted RBP6.48□□□□□ -1.37
TRAF1-203ENST00000546084 AKAP9Q99996 3911 aa6.48□□□□□ -1.37
TRAF1-203ENST00000546084 LINC00612Q8N6U2 182 aa6.48□□□□□ -1.37
TRAF1-203ENST00000546084 LINC00588Q9Y4M8 146 aa6.48□□□□□ -1.37
TRAF1-203ENST00000546084 TMEM254Q8TBM7 123 aa6.47□□□□□ -1.37
TRAF1-203ENST00000546084 H0Y9J4 135 aa6.47□□□□□ -1.37
TRAF1-203ENST00000546084 CSMD3Q7Z407 3707 aa6.46□□□□□ -1.37
TRAF1-203ENST00000546084 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.37
TRAF1-203ENST00000546084 C1orf137Q5JT78 98 aa6.46□□□□□ -1.37
TRAF1-203ENST00000546084 C8orf87E5RJ46 101 aa6.46□□□□□ -1.38
TRAF1-203ENST00000546084 PRYO14603 147 aa6.46□□□□□ -1.38
TRAF1-203ENST00000546084 C15orf56Q8N910 161 aa6.46□□□□□ -1.38
TRAF1-203ENST00000546084 A8MUN3 132 aa6.45□□□□□ -1.38
TRAF1-203ENST00000546084 CXCL6P80162 114 aa6.45□□□□□ -1.38
TRAF1-203ENST00000546084 H3BQ85 93 aa6.45□□□□□ -1.38
TRAF1-203ENST00000546084 HCG22E2RYF7 251 aa6.45□□□□□ -1.38
TRAF1-203ENST00000546084 LCA10Q71F78 164 aa6.44□□□□□ -1.38
TRAF1-203ENST00000546084 SRRM2Q9UQ35 2752 aaKnown RBP6.44□□□□□ -1.38
TRAF1-203ENST00000546084 SPINK6Q6UWN8 80 aa6.44□□□□□ -1.38
TRAF1-203ENST00000546084 A0A087WSZ3 146 aa6.43□□□□□ -1.38
TRAF1-203ENST00000546084 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
TRAF1-203ENST00000546084 PRR34Q9NV39 138 aa6.42□□□□□ -1.38
TRAF1-203ENST00000546084 KLKP1Q107X0 134 aa6.42□□□□□ -1.38
TRAF1-203ENST00000546084 TGP01266 2768 aa6.42□□□□□ -1.38
TRAF1-203ENST00000546084 DNAH10OSP0CZ25 163 aa6.42□□□□□ -1.38
TRAF1-203ENST00000546084 TRBV7-4A0A0J9YYF1 115 aa6.41□□□□□ -1.38
TRAF1-203ENST00000546084 ERC2-IT1O76042 136 aa6.41□□□□□ -1.38
TRAF1-203ENST00000546084 RPL37AP61513 92 aaKnown RBP6.41□□□□□ -1.38
TRAF1-203ENST00000546084 MP68P56378 58 aa6.41□□□□□ -1.38
TRAF1-203ENST00000546084 PHF5AQ7RTV0 110 aaKnown RBP6.41□□□□□ -1.38
TRAF1-203ENST00000546084 LINC01556Q5JQF7 62 aa6.4□□□□□ -1.38
TRAF1-203ENST00000546084 PRR26Q8N8Z3 221 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms